Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11551:11550
Extra
PDB:
ATOM 1 O3' U A1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 2 P U A1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 3 OP1 U A1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 4 OP2 U A1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 5 O5' U A1551 37.700 41.068 134.443 1.00 63.67 O
ATOM 6 C5' U A1551 37.906 39.679 134.268 1.00 63.13 C
ATOM 7 C4' U A1551 39.284 39.294 134.705 1.00 63.23 C
ATOM 8 O4' U A1551 39.560 38.011 134.121 1.00 62.56 O
ATOM 9 C3' U A1551 40.358 40.253 134.217 1.00 63.34 C
ATOM 10 O3' U A1551 41.133 40.945 135.276 1.00 64.07 O
ATOM 11 C2' U A1551 41.224 39.475 133.230 1.00 62.67 C
ATOM 12 O2' U A1551 42.604 39.495 133.488 1.00 62.83 O
ATOM 13 C1' U A1551 40.667 38.056 133.239 1.00 62.20 C
ATOM 14 N1 U A1551 40.216 37.646 131.867 1.00 61.46 N
ATOM 15 C2 U A1551 41.024 36.804 131.101 1.00 60.88 C
ATOM 16 O2 U A1551 42.027 36.260 131.520 1.00 60.93 O
ATOM 17 N3 U A1551 40.603 36.574 129.815 1.00 60.26 N
ATOM 18 C4 U A1551 39.514 37.127 129.212 1.00 60.15 C
ATOM 19 O4 U A1551 39.296 36.818 128.061 1.00 59.58 O
ATOM 20 C5 U A1551 38.759 38.020 130.022 1.00 60.76 C
ATOM 21 C6 U A1551 39.134 38.256 131.280 1.00 61.38 C
ATOM 22 P C A1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 23 OP1 C A1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 24 OP2 C A1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 25 O5' C A1552 43.118 41.021 136.774 1.00 56.20 O
TER
ATOM 1 O3' A B1549 37.297 40.799 128.473 1.00 61.76 O
ATOM 2 P U B1550 35.896 40.904 127.675 1.00 62.00 P
ATOM 3 OP1 U B1550 35.669 39.566 126.995 1.00 61.29 O
ATOM 4 OP2 U B1550 35.929 42.159 126.838 1.00 62.09 O
ATOM 5 O5' U B1550 34.853 41.095 128.864 1.00 62.56 O
ATOM 6 C5' U B1550 34.875 42.267 129.652 1.00 63.28 C
ATOM 7 C4' U B1550 34.505 41.984 131.074 1.00 63.79 C
ATOM 8 O4' U B1550 33.090 41.710 131.144 1.00 63.74 O
ATOM 9 C3' U B1550 35.217 40.785 131.730 1.00 63.66 C
ATOM 10 O3' U B1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 11 C2' U B1550 34.099 39.771 131.870 1.00 63.39 C
ATOM 12 O2' U B1550 34.244 38.916 132.974 1.00 63.59 O
ATOM 13 C1' U B1550 32.903 40.673 132.050 1.00 63.78 C
ATOM 14 N1 U B1550 31.627 40.028 131.794 1.00 63.47 N
ATOM 15 C2 U B1550 30.639 40.456 132.596 1.00 63.98 C
ATOM 16 O2 U B1550 30.796 41.319 133.391 1.00 64.62 O
ATOM 17 N3 U B1550 29.462 39.866 132.419 1.00 63.74 N
ATOM 18 C4 U B1550 29.175 38.873 131.518 1.00 63.03 C
ATOM 19 O4 U B1550 28.018 38.440 131.490 1.00 62.92 O
ATOM 20 C5 U B1550 30.267 38.451 130.723 1.00 62.53 C
ATOM 21 C6 U B1550 31.447 39.026 130.904 1.00 62.77 C
ATOM 22 P U B1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 23 OP1 U B1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 24 OP2 U B1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 25 O5' U B1551 37.700 41.068 134.443 1.00 63.67 O
TER
ATOM 2 P U A1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 3 OP1 U A1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 4 OP2 U A1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 5 O5' U A1551 37.700 41.068 134.443 1.00 63.67 O
ATOM 6 C5' U A1551 37.906 39.679 134.268 1.00 63.13 C
ATOM 7 C4' U A1551 39.284 39.294 134.705 1.00 63.23 C
ATOM 8 O4' U A1551 39.560 38.011 134.121 1.00 62.56 O
ATOM 9 C3' U A1551 40.358 40.253 134.217 1.00 63.34 C
ATOM 10 O3' U A1551 41.133 40.945 135.276 1.00 64.07 O
ATOM 11 C2' U A1551 41.224 39.475 133.230 1.00 62.67 C
ATOM 12 O2' U A1551 42.604 39.495 133.488 1.00 62.83 O
ATOM 13 C1' U A1551 40.667 38.056 133.239 1.00 62.20 C
ATOM 14 N1 U A1551 40.216 37.646 131.867 1.00 61.46 N
ATOM 15 C2 U A1551 41.024 36.804 131.101 1.00 60.88 C
ATOM 16 O2 U A1551 42.027 36.260 131.520 1.00 60.93 O
ATOM 17 N3 U A1551 40.603 36.574 129.815 1.00 60.26 N
ATOM 18 C4 U A1551 39.514 37.127 129.212 1.00 60.15 C
ATOM 19 O4 U A1551 39.296 36.818 128.061 1.00 59.58 O
ATOM 20 C5 U A1551 38.759 38.020 130.022 1.00 60.76 C
ATOM 21 C6 U A1551 39.134 38.256 131.280 1.00 61.38 C
ATOM 22 P C A1552 41.737 40.263 136.619 1.00 55.83 P
ATOM 23 OP1 C A1552 41.977 38.830 136.323 1.00 55.23 O
ATOM 24 OP2 C A1552 40.839 40.637 137.742 1.00 56.45 O
ATOM 25 O5' C A1552 43.118 41.021 136.774 1.00 56.20 O
TER
ATOM 1 O3' A B1549 37.297 40.799 128.473 1.00 61.76 O
ATOM 2 P U B1550 35.896 40.904 127.675 1.00 62.00 P
ATOM 3 OP1 U B1550 35.669 39.566 126.995 1.00 61.29 O
ATOM 4 OP2 U B1550 35.929 42.159 126.838 1.00 62.09 O
ATOM 5 O5' U B1550 34.853 41.095 128.864 1.00 62.56 O
ATOM 6 C5' U B1550 34.875 42.267 129.652 1.00 63.28 C
ATOM 7 C4' U B1550 34.505 41.984 131.074 1.00 63.79 C
ATOM 8 O4' U B1550 33.090 41.710 131.144 1.00 63.74 O
ATOM 9 C3' U B1550 35.217 40.785 131.730 1.00 63.66 C
ATOM 10 O3' U B1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 11 C2' U B1550 34.099 39.771 131.870 1.00 63.39 C
ATOM 12 O2' U B1550 34.244 38.916 132.974 1.00 63.59 O
ATOM 13 C1' U B1550 32.903 40.673 132.050 1.00 63.78 C
ATOM 14 N1 U B1550 31.627 40.028 131.794 1.00 63.47 N
ATOM 15 C2 U B1550 30.639 40.456 132.596 1.00 63.98 C
ATOM 16 O2 U B1550 30.796 41.319 133.391 1.00 64.62 O
ATOM 17 N3 U B1550 29.462 39.866 132.419 1.00 63.74 N
ATOM 18 C4 U B1550 29.175 38.873 131.518 1.00 63.03 C
ATOM 19 O4 U B1550 28.018 38.440 131.490 1.00 62.92 O
ATOM 20 C5 U B1550 30.267 38.451 130.723 1.00 62.53 C
ATOM 21 C6 U B1550 31.447 39.026 130.904 1.00 62.77 C
ATOM 22 P U B1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 23 OP1 U B1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 24 OP2 U B1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 25 O5' U B1551 37.700 41.068 134.443 1.00 63.67 O
TER
Atoms:
C4: (39.514,37.127,129.212)
N3: (40.603,36.574,129.815)
OP1: (36.604,43.242,133.902)
OP2: (37.814,41.932,132.120)
C2: (41.024,36.804,131.101)
C1': (40.667,38.056,133.239)
C3': (40.358,40.253,134.217)
O5': (37.700,41.068,134.443)
O4': (39.560,38.011,134.121)
C5': (37.906,39.679,134.268)
P: (37.007,41.943,133.327)
C4': (39.284,39.294,134.705)
C2': (41.224,39.475,133.230)
O2': (42.604,39.495,133.488)
N1: (40.216,37.646,131.867)
O4: (39.296,36.818,128.061)
O2: (42.027,36.260,131.520)
C6: (39.134,38.256,131.280)
C5: (38.759,38.020,130.022)
O3': (41.133,40.945,135.276)
N3: (40.603,36.574,129.815)
OP1: (36.604,43.242,133.902)
OP2: (37.814,41.932,132.120)
C2: (41.024,36.804,131.101)
C1': (40.667,38.056,133.239)
C3': (40.358,40.253,134.217)
O5': (37.700,41.068,134.443)
O4': (39.560,38.011,134.121)
C5': (37.906,39.679,134.268)
P: (37.007,41.943,133.327)
C4': (39.284,39.294,134.705)
C2': (41.224,39.475,133.230)
O2': (42.604,39.495,133.488)
N1: (40.216,37.646,131.867)
O4: (39.296,36.818,128.061)
O2: (42.027,36.260,131.520)
C6: (39.134,38.256,131.280)
C5: (38.759,38.020,130.022)
O3': (41.133,40.945,135.276)
C4: (29.175,38.873,131.518)
N3: (29.462,39.866,132.419)
OP1: (35.669,39.566,126.995)
OP2: (35.929,42.159,126.838)
C2: (30.639,40.456,132.596)
C1': (32.903,40.673,132.050)
C3': (35.217,40.785,131.730)
O5': (34.853,41.095,128.864)
O4': (33.090,41.710,131.144)
C5': (34.875,42.267,129.652)
P: (35.896,40.904,127.675)
C4': (34.505,41.984,131.074)
C2': (34.099,39.771,131.870)
O2': (34.244,38.916,132.974)
N1: (31.627,40.028,131.794)
O4: (28.018,38.440,131.490)
O2: (30.796,41.319,133.391)
C6: (31.447,39.026,130.904)
C5: (30.267,38.451,130.723)
O3': (35.650,41.120,133.044)
N3: (29.462,39.866,132.419)
OP1: (35.669,39.566,126.995)
OP2: (35.929,42.159,126.838)
C2: (30.639,40.456,132.596)
C1': (32.903,40.673,132.050)
C3': (35.217,40.785,131.730)
O5': (34.853,41.095,128.864)
O4': (33.090,41.710,131.144)
C5': (34.875,42.267,129.652)
P: (35.896,40.904,127.675)
C4': (34.505,41.984,131.074)
C2': (34.099,39.771,131.870)
O2': (34.244,38.916,132.974)
N1: (31.627,40.028,131.794)
O4: (28.018,38.440,131.490)
O2: (30.796,41.319,133.391)
C6: (31.447,39.026,130.904)
C5: (30.267,38.451,130.723)
O3': (35.650,41.120,133.044)
Image (generated by PyMOL):