ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:059:061

Extra

PDB:
ATOM 1 O3' U A 58 55.417 163.037 26.807 1.00 37.59 O
ATOM 2 P A A 59 54.654 163.324 28.191 1.00 40.00 P
ATOM 3 OP1 A A 59 53.292 163.828 27.889 1.00 41.87 O
ATOM 4 OP2 A A 59 55.547 164.132 29.063 1.00 40.79 O
ATOM 5 O5' A A 59 54.450 161.874 28.816 1.00 40.83 O
ATOM 6 C5' A A 59 55.575 161.052 29.117 1.00 41.44 C
ATOM 7 C4' A A 59 55.188 159.906 30.018 1.00 41.42 C
ATOM 8 O4' A A 59 56.446 159.371 30.508 1.00 44.18 O
ATOM 9 C3' A A 59 54.384 160.270 31.268 1.00 42.10 C
ATOM 10 O3' A A 59 53.000 159.953 31.128 1.00 41.39 O
ATOM 11 C2' A A 59 55.040 159.439 32.360 1.00 43.61 C
ATOM 12 O2' A A 59 54.586 158.103 32.346 1.00 43.46 O
ATOM 13 C1' A A 59 56.497 159.486 31.914 1.00 45.17 C
ATOM 14 N9 A A 59 57.169 160.745 32.244 1.00 45.55 N
ATOM 15 C8 A A 59 56.843 162.014 31.833 1.00 45.55 C
ATOM 16 N7 A A 59 57.634 162.942 32.304 1.00 47.82 N
ATOM 17 C5 A A 59 58.544 162.241 33.082 1.00 46.47 C
ATOM 18 C6 A A 59 59.639 162.652 33.859 1.00 45.58 C
ATOM 19 N6 A A 59 60.014 163.923 34.004 1.00 44.10 N
ATOM 20 N1 A A 59 60.345 161.699 34.496 1.00 46.73 N
ATOM 21 C2 A A 59 59.966 160.426 34.365 1.00 46.33 C
ATOM 22 N3 A A 59 58.957 159.916 33.673 1.00 45.75 N
ATOM 23 C4 A A 59 58.275 160.886 33.047 1.00 46.27 C
ATOM 24 P A A 60 51.963 160.284 32.324 1.00 39.98 P
ATOM 25 OP1 A A 60 51.269 161.551 31.969 1.00 41.07 O
ATOM 26 OP2 A A 60 52.626 160.168 33.635 1.00 38.29 O
ATOM 27 O5' A A 60 50.907 159.099 32.230 1.00 40.79 O
TER

ATOM 1 O3' A B 60 46.588 157.149 31.837 1.00 51.00 O
ATOM 2 P G B 61 45.793 157.494 30.482 1.00 55.07 P
ATOM 3 OP1 G B 61 44.570 158.256 30.854 1.00 56.00 O
ATOM 4 OP2 G B 61 45.674 156.240 29.677 1.00 55.49 O
ATOM 5 O5' G B 61 46.751 158.523 29.740 1.00 53.82 O
ATOM 6 C5' G B 61 47.260 158.270 28.429 1.00 50.28 C
ATOM 7 C4' G B 61 48.566 158.991 28.255 1.00 48.45 C
ATOM 8 O4' G B 61 49.617 158.274 28.953 1.00 46.35 O
ATOM 9 C3' G B 61 49.069 159.073 26.832 1.00 49.58 C
ATOM 10 O3' G B 61 48.397 160.122 26.144 1.00 49.58 O
ATOM 11 C2' G B 61 50.559 159.321 27.041 1.00 48.62 C
ATOM 12 O2' G B 61 50.854 160.653 27.411 1.00 50.08 O
ATOM 13 C1' G B 61 50.839 158.412 28.241 1.00 46.24 C
ATOM 14 N9 G B 61 51.317 157.083 27.865 1.00 42.77 N
ATOM 15 C8 G B 61 50.689 155.879 28.076 1.00 42.55 C
ATOM 16 N7 G B 61 51.370 154.860 27.632 1.00 40.48 N
ATOM 17 C5 G B 61 52.517 155.424 27.094 1.00 39.98 C
ATOM 18 C6 G B 61 53.633 154.814 26.467 1.00 39.45 C
ATOM 19 O6 G B 61 53.836 153.616 26.249 1.00 38.11 O
ATOM 20 N1 G B 61 54.573 155.756 26.072 1.00 39.63 N
ATOM 21 C2 G B 61 54.456 157.110 26.249 1.00 40.34 C
ATOM 22 N2 G B 61 55.468 157.859 25.783 1.00 39.94 N
ATOM 23 N3 G B 61 53.423 157.690 26.835 1.00 40.41 N
ATOM 24 C4 G B 61 52.499 156.794 27.230 1.00 40.49 C
ATOM 25 P C B 62 47.684 159.823 24.733 1.00 49.50 P
ATOM 26 OP1 C B 62 46.696 160.910 24.544 1.00 49.92 O
ATOM 27 OP2 C B 62 47.230 158.410 24.676 1.00 49.70 O
ATOM 28 O5' C B 62 48.861 160.003 23.678 1.00 47.21 O
TER

Atoms:
OP1: (53.292,163.828,27.889)
OP2: (55.547,164.132,29.063)
C3': (54.384,160.270,31.268)
C1': (56.497,159.486,31.914)
C5': (55.575,161.052,29.117)
O4': (56.446,159.371,30.508)
C8: (56.843,162.014,31.833)
O2': (54.586,158.103,32.346)
C6: (59.639,162.652,33.859)
C5: (58.544,162.241,33.082)
C4: (58.275,160.886,33.047)
P: (54.654,163.324,28.191)
C4': (55.188,159.906,30.018)
C2': (55.040,159.439,32.360)
C2: (59.966,160.426,34.365)
N1: (60.345,161.699,34.496)
N3: (58.957,159.916,33.673)
N6: (60.014,163.923,34.004)
N7: (57.634,162.942,32.304)
N9: (57.169,160.745,32.244)
O5': (54.450,161.874,28.816)
O3': (53.000,159.953,31.128)
OP1: (44.570,158.256,30.854)
OP2: (45.674,156.240,29.677)
C3': (49.069,159.073,26.832)
C1': (50.839,158.412,28.241)
C5': (47.260,158.270,28.429)
O6: (53.836,153.616,26.249)
O4': (49.617,158.274,28.953)
C8: (50.689,155.879,28.076)
C2: (54.456,157.110,26.249)
C6: (53.633,154.814,26.467)
C5: (52.517,155.424,27.094)
C4: (52.499,156.794,27.230)
P: (45.793,157.494,30.482)
C4': (48.566,158.991,28.255)
C2': (50.559,159.321,27.041)
O2': (50.854,160.653,27.411)
N1: (54.573,155.756,26.072)
N2: (55.468,157.859,25.783)
N3: (53.423,157.690,26.835)
N7: (51.370,154.860,27.632)
N9: (51.317,157.083,27.865)
O5': (46.751,158.523,29.740)
O3': (48.397,160.122,26.144)
Image (generated by PyMOL):
PyMOL image
show in jmol