Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61252:61225
Extra
PDB:
ATOM 1 O3' U A1251 243.046 -22.949 315.717 1.00140.83 O
ATOM 2 P U A1252 242.237 -22.020 314.665 1.00145.26 P
ATOM 3 OP1 U A1252 243.029 -21.985 313.411 1.00144.38 O
ATOM 4 OP2 U A1252 241.935 -20.739 315.348 1.00146.11 O
ATOM 5 O5' U A1252 240.891 -22.841 314.431 1.00145.10 O
ATOM 6 C5' U A1252 239.683 -22.202 314.015 1.00145.24 C
ATOM 7 C4' U A1252 238.475 -22.886 314.622 1.00145.66 C
ATOM 8 O4' U A1252 238.415 -22.594 316.038 1.00146.66 O
ATOM 9 C3' U A1252 237.100 -22.501 314.067 1.00145.72 C
ATOM 10 O3' U A1252 236.751 -23.299 312.938 1.00144.87 O
ATOM 11 C2' U A1252 236.171 -22.724 315.260 1.00146.63 C
ATOM 12 O2' U A1252 235.724 -24.072 315.295 1.00146.38 O
ATOM 13 C1' U A1252 237.086 -22.474 316.464 1.00147.26 C
ATOM 14 N1 U A1252 236.888 -21.125 317.052 1.00148.09 N
ATOM 15 C2 U A1252 237.908 -20.181 317.137 1.00148.20 C
ATOM 16 O2 U A1252 239.045 -20.313 316.740 1.00147.66 O
ATOM 17 N3 U A1252 237.574 -18.993 317.706 1.00149.03 N
ATOM 18 C4 U A1252 236.355 -18.649 318.198 1.00149.76 C
ATOM 19 O4 U A1252 236.224 -17.533 318.688 1.00150.49 O
ATOM 20 C5 U A1252 235.365 -19.673 318.100 1.00149.62 C
ATOM 21 C6 U A1252 235.653 -20.843 317.552 1.00148.81 C
ATOM 22 P U A1253 235.423 -23.018 312.067 1.00134.97 P
ATOM 23 OP1 U A1253 234.958 -24.341 311.537 1.00134.41 O
ATOM 24 OP2 U A1253 235.759 -21.942 311.108 1.00134.59 O
ATOM 25 O5' U A1253 234.384 -22.474 313.131 1.00136.04 O
TER
ATOM 1 O3' A B1224 231.432 -18.900 320.335 1.00147.16 O
ATOM 2 P U B1225 230.696 -19.848 319.265 1.00157.86 P
ATOM 3 OP1 U B1225 230.322 -18.997 318.111 1.00157.45 O
ATOM 4 OP2 U B1225 229.623 -20.579 319.985 1.00158.50 O
ATOM 5 O5' U B1225 231.852 -20.865 318.848 1.00156.87 O
ATOM 6 C5' U B1225 231.757 -22.249 319.175 1.00156.69 C
ATOM 7 C4' U B1225 233.098 -22.944 319.091 1.00156.01 C
ATOM 8 O4' U B1225 233.791 -22.830 320.364 1.00156.71 O
ATOM 9 C3' U B1225 233.051 -24.445 318.834 1.00155.40 C
ATOM 10 O3' U B1225 232.871 -24.774 317.468 1.00154.45 O
ATOM 11 C2' U B1225 234.375 -24.930 319.413 1.00155.26 C
ATOM 12 O2' U B1225 235.446 -24.675 318.520 1.00154.46 O
ATOM 13 C1' U B1225 234.526 -24.013 320.624 1.00156.32 C
ATOM 14 N1 U B1225 233.999 -24.645 321.858 1.00157.12 N
ATOM 15 C2 U B1225 234.722 -25.707 322.388 1.00156.95 C
ATOM 16 O2 U B1225 235.762 -26.132 321.901 1.00156.21 O
ATOM 17 N3 U B1225 234.174 -26.257 323.526 1.00157.73 N
ATOM 18 C4 U B1225 233.011 -25.878 324.174 1.00158.65 C
ATOM 19 O4 U B1225 232.659 -26.478 325.198 1.00159.30 O
ATOM 20 C5 U B1225 232.328 -24.773 323.563 1.00158.78 C
ATOM 21 C6 U B1225 232.829 -24.216 322.453 1.00158.02 C
ATOM 22 P U B1226 232.034 -26.083 317.050 1.00129.40 P
ATOM 23 OP1 U B1226 231.860 -26.028 315.582 1.00128.52 O
ATOM 24 OP2 U B1226 230.824 -26.129 317.906 1.00130.33 O
ATOM 25 O5' U B1226 233.015 -27.278 317.441 1.00129.02 O
TER
ATOM 2 P U A1252 242.237 -22.020 314.665 1.00145.26 P
ATOM 3 OP1 U A1252 243.029 -21.985 313.411 1.00144.38 O
ATOM 4 OP2 U A1252 241.935 -20.739 315.348 1.00146.11 O
ATOM 5 O5' U A1252 240.891 -22.841 314.431 1.00145.10 O
ATOM 6 C5' U A1252 239.683 -22.202 314.015 1.00145.24 C
ATOM 7 C4' U A1252 238.475 -22.886 314.622 1.00145.66 C
ATOM 8 O4' U A1252 238.415 -22.594 316.038 1.00146.66 O
ATOM 9 C3' U A1252 237.100 -22.501 314.067 1.00145.72 C
ATOM 10 O3' U A1252 236.751 -23.299 312.938 1.00144.87 O
ATOM 11 C2' U A1252 236.171 -22.724 315.260 1.00146.63 C
ATOM 12 O2' U A1252 235.724 -24.072 315.295 1.00146.38 O
ATOM 13 C1' U A1252 237.086 -22.474 316.464 1.00147.26 C
ATOM 14 N1 U A1252 236.888 -21.125 317.052 1.00148.09 N
ATOM 15 C2 U A1252 237.908 -20.181 317.137 1.00148.20 C
ATOM 16 O2 U A1252 239.045 -20.313 316.740 1.00147.66 O
ATOM 17 N3 U A1252 237.574 -18.993 317.706 1.00149.03 N
ATOM 18 C4 U A1252 236.355 -18.649 318.198 1.00149.76 C
ATOM 19 O4 U A1252 236.224 -17.533 318.688 1.00150.49 O
ATOM 20 C5 U A1252 235.365 -19.673 318.100 1.00149.62 C
ATOM 21 C6 U A1252 235.653 -20.843 317.552 1.00148.81 C
ATOM 22 P U A1253 235.423 -23.018 312.067 1.00134.97 P
ATOM 23 OP1 U A1253 234.958 -24.341 311.537 1.00134.41 O
ATOM 24 OP2 U A1253 235.759 -21.942 311.108 1.00134.59 O
ATOM 25 O5' U A1253 234.384 -22.474 313.131 1.00136.04 O
TER
ATOM 1 O3' A B1224 231.432 -18.900 320.335 1.00147.16 O
ATOM 2 P U B1225 230.696 -19.848 319.265 1.00157.86 P
ATOM 3 OP1 U B1225 230.322 -18.997 318.111 1.00157.45 O
ATOM 4 OP2 U B1225 229.623 -20.579 319.985 1.00158.50 O
ATOM 5 O5' U B1225 231.852 -20.865 318.848 1.00156.87 O
ATOM 6 C5' U B1225 231.757 -22.249 319.175 1.00156.69 C
ATOM 7 C4' U B1225 233.098 -22.944 319.091 1.00156.01 C
ATOM 8 O4' U B1225 233.791 -22.830 320.364 1.00156.71 O
ATOM 9 C3' U B1225 233.051 -24.445 318.834 1.00155.40 C
ATOM 10 O3' U B1225 232.871 -24.774 317.468 1.00154.45 O
ATOM 11 C2' U B1225 234.375 -24.930 319.413 1.00155.26 C
ATOM 12 O2' U B1225 235.446 -24.675 318.520 1.00154.46 O
ATOM 13 C1' U B1225 234.526 -24.013 320.624 1.00156.32 C
ATOM 14 N1 U B1225 233.999 -24.645 321.858 1.00157.12 N
ATOM 15 C2 U B1225 234.722 -25.707 322.388 1.00156.95 C
ATOM 16 O2 U B1225 235.762 -26.132 321.901 1.00156.21 O
ATOM 17 N3 U B1225 234.174 -26.257 323.526 1.00157.73 N
ATOM 18 C4 U B1225 233.011 -25.878 324.174 1.00158.65 C
ATOM 19 O4 U B1225 232.659 -26.478 325.198 1.00159.30 O
ATOM 20 C5 U B1225 232.328 -24.773 323.563 1.00158.78 C
ATOM 21 C6 U B1225 232.829 -24.216 322.453 1.00158.02 C
ATOM 22 P U B1226 232.034 -26.083 317.050 1.00129.40 P
ATOM 23 OP1 U B1226 231.860 -26.028 315.582 1.00128.52 O
ATOM 24 OP2 U B1226 230.824 -26.129 317.906 1.00130.33 O
ATOM 25 O5' U B1226 233.015 -27.278 317.441 1.00129.02 O
TER
Atoms:
C4: (236.355,-18.649,318.198)
N3: (237.574,-18.993,317.706)
OP1: (243.029,-21.985,313.411)
OP2: (241.935,-20.739,315.348)
C2: (237.908,-20.181,317.137)
C1': (237.086,-22.474,316.464)
C3': (237.100,-22.501,314.067)
O5': (240.891,-22.841,314.431)
O4': (238.415,-22.594,316.038)
C5': (239.683,-22.202,314.015)
P: (242.237,-22.020,314.665)
C4': (238.475,-22.886,314.622)
C2': (236.171,-22.724,315.260)
O2': (235.724,-24.072,315.295)
N1: (236.888,-21.125,317.052)
O4: (236.224,-17.533,318.688)
O2: (239.045,-20.313,316.740)
C6: (235.653,-20.843,317.552)
C5: (235.365,-19.673,318.100)
O3': (236.751,-23.299,312.938)
N3: (237.574,-18.993,317.706)
OP1: (243.029,-21.985,313.411)
OP2: (241.935,-20.739,315.348)
C2: (237.908,-20.181,317.137)
C1': (237.086,-22.474,316.464)
C3': (237.100,-22.501,314.067)
O5': (240.891,-22.841,314.431)
O4': (238.415,-22.594,316.038)
C5': (239.683,-22.202,314.015)
P: (242.237,-22.020,314.665)
C4': (238.475,-22.886,314.622)
C2': (236.171,-22.724,315.260)
O2': (235.724,-24.072,315.295)
N1: (236.888,-21.125,317.052)
O4: (236.224,-17.533,318.688)
O2: (239.045,-20.313,316.740)
C6: (235.653,-20.843,317.552)
C5: (235.365,-19.673,318.100)
O3': (236.751,-23.299,312.938)
C4: (233.011,-25.878,324.174)
N3: (234.174,-26.257,323.526)
OP1: (230.322,-18.997,318.111)
OP2: (229.623,-20.579,319.985)
C2: (234.722,-25.707,322.388)
C1': (234.526,-24.013,320.624)
C3': (233.051,-24.445,318.834)
O5': (231.852,-20.865,318.848)
O4': (233.791,-22.830,320.364)
C5': (231.757,-22.249,319.175)
P: (230.696,-19.848,319.265)
C4': (233.098,-22.944,319.091)
C2': (234.375,-24.930,319.413)
O2': (235.446,-24.675,318.520)
N1: (233.999,-24.645,321.858)
O4: (232.659,-26.478,325.198)
O2: (235.762,-26.132,321.901)
C6: (232.829,-24.216,322.453)
C5: (232.328,-24.773,323.563)
O3': (232.871,-24.774,317.468)
N3: (234.174,-26.257,323.526)
OP1: (230.322,-18.997,318.111)
OP2: (229.623,-20.579,319.985)
C2: (234.722,-25.707,322.388)
C1': (234.526,-24.013,320.624)
C3': (233.051,-24.445,318.834)
O5': (231.852,-20.865,318.848)
O4': (233.791,-22.830,320.364)
C5': (231.757,-22.249,319.175)
P: (230.696,-19.848,319.265)
C4': (233.098,-22.944,319.091)
C2': (234.375,-24.930,319.413)
O2': (235.446,-24.675,318.520)
N1: (233.999,-24.645,321.858)
O4: (232.659,-26.478,325.198)
O2: (235.762,-26.132,321.901)
C6: (232.829,-24.216,322.453)
C5: (232.328,-24.773,323.563)
O3': (232.871,-24.774,317.468)
Image (generated by PyMOL):