Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A28:A354
Extra
PDB:
ATOM 1 O3' A A 27 -28.956 50.467 101.658 1.00 33.82 O
ATOM 2 P A A 28 -30.240 49.562 101.995 1.00 35.38 P
ATOM 3 OP1 A A 28 -29.845 48.506 102.951 1.00 37.99 O
ATOM 4 OP2 A A 28 -30.885 49.184 100.716 1.00 38.52 O
ATOM 5 O5' A A 28 -31.225 50.560 102.756 1.00 10.33 O
ATOM 6 C5' A A 28 -30.756 51.401 103.837 1.00 10.78 C
ATOM 7 C4' A A 28 -31.523 52.697 103.854 1.00 10.33 C
ATOM 8 O4' A A 28 -31.154 53.489 102.696 1.00 10.33 O
ATOM 9 C3' A A 28 -33.028 52.540 103.760 1.00 10.33 C
ATOM 10 O3' A A 28 -33.599 52.334 105.040 1.00 11.28 O
ATOM 11 C2' A A 28 -33.467 53.853 103.129 1.00 10.35 C
ATOM 12 O2' A A 28 -33.586 54.884 104.080 1.00 10.33 O
ATOM 13 C1' A A 28 -32.290 54.171 102.203 1.00 10.33 C
ATOM 14 N9 A A 28 -32.516 53.739 100.825 1.00 17.46 N
ATOM 15 C8 A A 28 -31.921 52.689 100.167 1.00 18.01 C
ATOM 16 N7 A A 28 -32.320 52.544 98.929 1.00 17.65 N
ATOM 17 C5 A A 28 -33.238 53.564 98.758 1.00 17.36 C
ATOM 18 C6 A A 28 -34.005 53.946 97.665 1.00 18.09 C
ATOM 19 N6 A A 28 -33.957 53.326 96.495 1.00 18.61 N
ATOM 20 N1 A A 28 -34.832 55.003 97.812 1.00 18.09 N
ATOM 21 C2 A A 28 -34.860 55.630 99.000 1.00 17.23 C
ATOM 22 N3 A A 28 -34.176 55.363 100.109 1.00 16.34 N
ATOM 23 C4 A A 28 -33.374 54.306 99.918 1.00 17.21 C
ATOM 24 P C A 29 -34.965 51.501 105.171 1.00 37.02 P
ATOM 25 OP1 C A 29 -35.263 51.287 106.613 1.00 69.49 O
ATOM 26 OP2 C A 29 -34.871 50.332 104.259 1.00 68.23 O
ATOM 27 O5' C A 29 -36.066 52.488 104.578 1.00 0.79 O
TER
ATOM 1 O3' A B 353 -33.527 54.998 109.886 1.00 31.56 O
ATOM 2 P A B 354 -32.773 53.960 110.846 1.00 38.80 P
ATOM 3 OP1 A B 354 -33.826 53.096 111.449 1.00 71.02 O
ATOM 4 OP2 A B 354 -31.840 54.708 111.733 1.00 72.33 O
ATOM 5 O5' A B 354 -31.907 53.087 109.836 1.00 8.38 O
ATOM 6 C5' A B 354 -32.542 52.108 108.973 1.00 7.91 C
ATOM 7 C4' A B 354 -31.499 51.359 108.183 1.00 6.67 C
ATOM 8 O4' A B 354 -30.815 52.289 107.319 1.00 6.70 O
ATOM 9 C3' A B 354 -30.427 50.690 109.023 1.00 6.52 C
ATOM 10 O3' A B 354 -30.877 49.361 109.269 1.00 6.52 O
ATOM 11 C2' A B 354 -29.198 50.729 108.127 1.00 6.52 C
ATOM 12 O2' A B 354 -29.134 49.623 107.272 1.00 8.09 O
ATOM 13 C1' A B 354 -29.443 51.981 107.280 1.00 6.66 C
ATOM 14 N9 A B 354 -28.720 53.193 107.660 1.00 18.77 N
ATOM 15 C8 A B 354 -29.080 54.122 108.600 1.00 18.62 C
ATOM 16 N7 A B 354 -28.266 55.141 108.668 1.00 18.24 N
ATOM 17 C5 A B 354 -27.294 54.858 107.723 1.00 17.10 C
ATOM 18 C6 A B 354 -26.145 55.556 107.310 1.00 17.12 C
ATOM 19 N6 A B 354 -25.755 56.728 107.824 1.00 19.54 N
ATOM 20 N1 A B 354 -25.395 55.004 106.338 1.00 18.16 N
ATOM 21 C2 A B 354 -25.775 53.824 105.832 1.00 18.97 C
ATOM 22 N3 A B 354 -26.824 53.068 106.145 1.00 18.27 N
ATOM 23 C4 A B 354 -27.553 53.654 107.105 1.00 18.01 C
ATOM 24 P U B 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 25 OP1 U B 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 26 OP2 U B 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 27 O5' U B 355 -28.822 47.889 109.218 1.00 11.82 O
TER
ATOM 2 P A A 28 -30.240 49.562 101.995 1.00 35.38 P
ATOM 3 OP1 A A 28 -29.845 48.506 102.951 1.00 37.99 O
ATOM 4 OP2 A A 28 -30.885 49.184 100.716 1.00 38.52 O
ATOM 5 O5' A A 28 -31.225 50.560 102.756 1.00 10.33 O
ATOM 6 C5' A A 28 -30.756 51.401 103.837 1.00 10.78 C
ATOM 7 C4' A A 28 -31.523 52.697 103.854 1.00 10.33 C
ATOM 8 O4' A A 28 -31.154 53.489 102.696 1.00 10.33 O
ATOM 9 C3' A A 28 -33.028 52.540 103.760 1.00 10.33 C
ATOM 10 O3' A A 28 -33.599 52.334 105.040 1.00 11.28 O
ATOM 11 C2' A A 28 -33.467 53.853 103.129 1.00 10.35 C
ATOM 12 O2' A A 28 -33.586 54.884 104.080 1.00 10.33 O
ATOM 13 C1' A A 28 -32.290 54.171 102.203 1.00 10.33 C
ATOM 14 N9 A A 28 -32.516 53.739 100.825 1.00 17.46 N
ATOM 15 C8 A A 28 -31.921 52.689 100.167 1.00 18.01 C
ATOM 16 N7 A A 28 -32.320 52.544 98.929 1.00 17.65 N
ATOM 17 C5 A A 28 -33.238 53.564 98.758 1.00 17.36 C
ATOM 18 C6 A A 28 -34.005 53.946 97.665 1.00 18.09 C
ATOM 19 N6 A A 28 -33.957 53.326 96.495 1.00 18.61 N
ATOM 20 N1 A A 28 -34.832 55.003 97.812 1.00 18.09 N
ATOM 21 C2 A A 28 -34.860 55.630 99.000 1.00 17.23 C
ATOM 22 N3 A A 28 -34.176 55.363 100.109 1.00 16.34 N
ATOM 23 C4 A A 28 -33.374 54.306 99.918 1.00 17.21 C
ATOM 24 P C A 29 -34.965 51.501 105.171 1.00 37.02 P
ATOM 25 OP1 C A 29 -35.263 51.287 106.613 1.00 69.49 O
ATOM 26 OP2 C A 29 -34.871 50.332 104.259 1.00 68.23 O
ATOM 27 O5' C A 29 -36.066 52.488 104.578 1.00 0.79 O
TER
ATOM 1 O3' A B 353 -33.527 54.998 109.886 1.00 31.56 O
ATOM 2 P A B 354 -32.773 53.960 110.846 1.00 38.80 P
ATOM 3 OP1 A B 354 -33.826 53.096 111.449 1.00 71.02 O
ATOM 4 OP2 A B 354 -31.840 54.708 111.733 1.00 72.33 O
ATOM 5 O5' A B 354 -31.907 53.087 109.836 1.00 8.38 O
ATOM 6 C5' A B 354 -32.542 52.108 108.973 1.00 7.91 C
ATOM 7 C4' A B 354 -31.499 51.359 108.183 1.00 6.67 C
ATOM 8 O4' A B 354 -30.815 52.289 107.319 1.00 6.70 O
ATOM 9 C3' A B 354 -30.427 50.690 109.023 1.00 6.52 C
ATOM 10 O3' A B 354 -30.877 49.361 109.269 1.00 6.52 O
ATOM 11 C2' A B 354 -29.198 50.729 108.127 1.00 6.52 C
ATOM 12 O2' A B 354 -29.134 49.623 107.272 1.00 8.09 O
ATOM 13 C1' A B 354 -29.443 51.981 107.280 1.00 6.66 C
ATOM 14 N9 A B 354 -28.720 53.193 107.660 1.00 18.77 N
ATOM 15 C8 A B 354 -29.080 54.122 108.600 1.00 18.62 C
ATOM 16 N7 A B 354 -28.266 55.141 108.668 1.00 18.24 N
ATOM 17 C5 A B 354 -27.294 54.858 107.723 1.00 17.10 C
ATOM 18 C6 A B 354 -26.145 55.556 107.310 1.00 17.12 C
ATOM 19 N6 A B 354 -25.755 56.728 107.824 1.00 19.54 N
ATOM 20 N1 A B 354 -25.395 55.004 106.338 1.00 18.16 N
ATOM 21 C2 A B 354 -25.775 53.824 105.832 1.00 18.97 C
ATOM 22 N3 A B 354 -26.824 53.068 106.145 1.00 18.27 N
ATOM 23 C4 A B 354 -27.553 53.654 107.105 1.00 18.01 C
ATOM 24 P U B 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 25 OP1 U B 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 26 OP2 U B 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 27 O5' U B 355 -28.822 47.889 109.218 1.00 11.82 O
TER
Atoms:
OP1: (-29.845,48.506,102.951)
OP2: (-30.885,49.184,100.716)
C3': (-33.028,52.540,103.760)
C1': (-32.290,54.171,102.203)
C5': (-30.756,51.401,103.837)
O4': (-31.154,53.489,102.696)
C8: (-31.921,52.689,100.167)
O2': (-33.586,54.884,104.080)
C6: (-34.005,53.946,97.665)
C5: (-33.238,53.564,98.758)
C4: (-33.374,54.306,99.918)
P: (-30.240,49.562,101.995)
C4': (-31.523,52.697,103.854)
C2': (-33.467,53.853,103.129)
C2: (-34.860,55.630,99.000)
N1: (-34.832,55.003,97.812)
N3: (-34.176,55.363,100.109)
N6: (-33.957,53.326,96.495)
N7: (-32.320,52.544,98.929)
N9: (-32.516,53.739,100.825)
O5': (-31.225,50.560,102.756)
O3': (-33.599,52.334,105.040)
OP2: (-30.885,49.184,100.716)
C3': (-33.028,52.540,103.760)
C1': (-32.290,54.171,102.203)
C5': (-30.756,51.401,103.837)
O4': (-31.154,53.489,102.696)
C8: (-31.921,52.689,100.167)
O2': (-33.586,54.884,104.080)
C6: (-34.005,53.946,97.665)
C5: (-33.238,53.564,98.758)
C4: (-33.374,54.306,99.918)
P: (-30.240,49.562,101.995)
C4': (-31.523,52.697,103.854)
C2': (-33.467,53.853,103.129)
C2: (-34.860,55.630,99.000)
N1: (-34.832,55.003,97.812)
N3: (-34.176,55.363,100.109)
N6: (-33.957,53.326,96.495)
N7: (-32.320,52.544,98.929)
N9: (-32.516,53.739,100.825)
O5': (-31.225,50.560,102.756)
O3': (-33.599,52.334,105.040)
OP1: (-33.826,53.096,111.449)
OP2: (-31.840,54.708,111.733)
C3': (-30.427,50.690,109.023)
C1': (-29.443,51.981,107.280)
C5': (-32.542,52.108,108.973)
O4': (-30.815,52.289,107.319)
C8: (-29.080,54.122,108.600)
O2': (-29.134,49.623,107.272)
C6: (-26.145,55.556,107.310)
C5: (-27.294,54.858,107.723)
C4: (-27.553,53.654,107.105)
P: (-32.773,53.960,110.846)
C4': (-31.499,51.359,108.183)
C2': (-29.198,50.729,108.127)
C2: (-25.775,53.824,105.832)
N1: (-25.395,55.004,106.338)
N3: (-26.824,53.068,106.145)
N6: (-25.755,56.728,107.824)
N7: (-28.266,55.141,108.668)
N9: (-28.720,53.193,107.660)
O5': (-31.907,53.087,109.836)
O3': (-30.877,49.361,109.269)
OP2: (-31.840,54.708,111.733)
C3': (-30.427,50.690,109.023)
C1': (-29.443,51.981,107.280)
C5': (-32.542,52.108,108.973)
O4': (-30.815,52.289,107.319)
C8: (-29.080,54.122,108.600)
O2': (-29.134,49.623,107.272)
C6: (-26.145,55.556,107.310)
C5: (-27.294,54.858,107.723)
C4: (-27.553,53.654,107.105)
P: (-32.773,53.960,110.846)
C4': (-31.499,51.359,108.183)
C2': (-29.198,50.729,108.127)
C2: (-25.775,53.824,105.832)
N1: (-25.395,55.004,106.338)
N3: (-26.824,53.068,106.145)
N6: (-25.755,56.728,107.824)
N7: (-28.266,55.141,108.668)
N9: (-28.720,53.193,107.660)
O5': (-31.907,53.087,109.836)
O3': (-30.877,49.361,109.269)
Image (generated by PyMOL):