ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A640:A814

Extra

PDB:
ATOM 1 O3' G A 639 -42.319 51.686 15.192 1.00 36.13 O
ATOM 2 P G A 640 -43.344 50.575 15.744 1.00 77.24 P
ATOM 3 OP1 G A 640 -43.752 50.998 17.111 1.00 58.99 O
ATOM 4 OP2 G A 640 -42.728 49.236 15.544 1.00 57.13 O
ATOM 5 O5' G A 640 -44.609 50.720 14.782 1.00 46.19 O
ATOM 6 C5' G A 640 -45.264 51.995 14.652 1.00 41.80 C
ATOM 7 C4' G A 640 -46.521 51.887 13.824 1.00 38.45 C
ATOM 8 O4' G A 640 -46.214 51.734 12.420 1.00 36.67 O
ATOM 9 C3' G A 640 -47.472 50.755 14.144 1.00 36.62 C
ATOM 10 O3' G A 640 -48.296 51.121 15.237 1.00 35.94 O
ATOM 11 C2' G A 640 -48.287 50.638 12.861 1.00 36.10 C
ATOM 12 O2' G A 640 -49.361 51.557 12.827 1.00 35.26 O
ATOM 13 C1' G A 640 -47.272 51.040 11.786 1.00 34.72 C
ATOM 14 N9 G A 640 -46.715 49.924 11.025 1.00 57.70 N
ATOM 15 C8 G A 640 -45.436 49.434 11.105 1.00 56.20 C
ATOM 16 N7 G A 640 -45.222 48.429 10.303 1.00 55.23 N
ATOM 17 C5 G A 640 -46.436 48.237 9.656 1.00 54.28 C
ATOM 18 C6 G A 640 -46.810 47.279 8.685 1.00 53.28 C
ATOM 19 O6 G A 640 -46.123 46.379 8.187 1.00 54.58 O
ATOM 20 N1 G A 640 -48.136 47.436 8.296 1.00 51.26 N
ATOM 21 C2 G A 640 -48.993 48.392 8.779 1.00 52.58 C
ATOM 22 N2 G A 640 -50.236 48.381 8.270 1.00 53.66 N
ATOM 23 N3 G A 640 -48.656 49.292 9.691 1.00 53.41 N
ATOM 24 C4 G A 640 -47.369 49.154 10.083 1.00 55.21 C
ATOM 25 P A A 641 -48.975 49.981 16.137 1.00 89.58 P
ATOM 26 OP1 A A 641 -49.439 50.626 17.389 1.00 77.27 O
ATOM 27 OP2 A A 641 -48.045 48.823 16.204 1.00 74.93 O
ATOM 28 O5' A A 641 -50.256 49.537 15.306 1.00 28.79 O
TER

ATOM 1 O3' U B 813 -53.141 52.967 12.160 1.00 19.08 O
ATOM 2 P G B 814 -52.301 54.216 12.719 1.00 32.19 P
ATOM 3 OP1 G B 814 -51.399 53.700 13.789 1.00 75.83 O
ATOM 4 OP2 G B 814 -53.290 55.281 13.039 1.00 74.92 O
ATOM 5 O5' G B 814 -51.415 54.701 11.479 1.00 71.57 O
ATOM 6 C5' G B 814 -50.310 53.890 11.027 1.00 72.39 C
ATOM 7 C4' G B 814 -49.504 54.570 9.926 1.00 72.43 C
ATOM 8 O4' G B 814 -50.245 54.648 8.677 1.00 72.01 O
ATOM 9 C3' G B 814 -48.955 55.976 10.103 1.00 72.35 C
ATOM 10 O3' G B 814 -47.798 56.030 10.918 1.00 74.38 O
ATOM 11 C2' G B 814 -48.572 56.333 8.671 1.00 70.61 C
ATOM 12 O2' G B 814 -47.350 55.735 8.288 1.00 69.71 O
ATOM 13 C1' G B 814 -49.690 55.676 7.866 1.00 70.00 C
ATOM 14 N9 G B 814 -50.716 56.660 7.524 1.00 55.16 N
ATOM 15 C8 G B 814 -51.950 56.833 8.109 1.00 55.73 C
ATOM 16 N7 G B 814 -52.615 57.843 7.615 1.00 55.73 N
ATOM 17 C5 G B 814 -51.779 58.366 6.638 1.00 54.40 C
ATOM 18 C6 G B 814 -51.957 59.478 5.776 1.00 54.65 C
ATOM 19 O6 G B 814 -52.914 60.255 5.713 1.00 58.10 O
ATOM 20 N1 G B 814 -50.868 59.650 4.930 1.00 53.10 N
ATOM 21 C2 G B 814 -49.743 58.861 4.918 1.00 54.09 C
ATOM 22 N2 G B 814 -48.794 59.187 4.024 1.00 54.23 N
ATOM 23 N3 G B 814 -49.560 57.826 5.724 1.00 54.37 N
ATOM 24 C4 G B 814 -50.611 57.637 6.553 1.00 53.85 C
ATOM 25 P G B 815 -47.373 57.426 11.593 1.00 49.96 P
ATOM 26 OP1 G B 815 -46.206 57.145 12.472 1.00 80.99 O
ATOM 27 OP2 G B 815 -48.598 58.048 12.173 1.00 80.44 O
ATOM 28 O5' G B 815 -46.866 58.329 10.381 1.00 63.65 O
TER

Atoms:
OP1: (-43.752,50.998,17.111)
OP2: (-42.728,49.236,15.544)
C3': (-47.472,50.755,14.144)
C1': (-47.272,51.040,11.786)
C5': (-45.264,51.995,14.652)
O6: (-46.123,46.379,8.187)
O4': (-46.214,51.734,12.420)
C8: (-45.436,49.434,11.105)
C2: (-48.993,48.392,8.779)
C6: (-46.810,47.279,8.685)
C5: (-46.436,48.237,9.656)
C4: (-47.369,49.154,10.083)
P: (-43.344,50.575,15.744)
C4': (-46.521,51.887,13.824)
C2': (-48.287,50.638,12.861)
O2': (-49.361,51.557,12.827)
N1: (-48.136,47.436,8.296)
N2: (-50.236,48.381,8.270)
N3: (-48.656,49.292,9.691)
N7: (-45.222,48.429,10.303)
N9: (-46.715,49.924,11.025)
O5': (-44.609,50.720,14.782)
O3': (-48.296,51.121,15.237)
OP1: (-51.399,53.700,13.789)
OP2: (-53.290,55.281,13.039)
C3': (-48.955,55.976,10.103)
C1': (-49.690,55.676,7.866)
C5': (-50.310,53.890,11.027)
O6: (-52.914,60.255,5.713)
O4': (-50.245,54.648,8.677)
C8: (-51.950,56.833,8.109)
C2: (-49.743,58.861,4.918)
C6: (-51.957,59.478,5.776)
C5: (-51.779,58.366,6.638)
C4: (-50.611,57.637,6.553)
P: (-52.301,54.216,12.719)
C4': (-49.504,54.570,9.926)
C2': (-48.572,56.333,8.671)
O2': (-47.350,55.735,8.288)
N1: (-50.868,59.650,4.930)
N2: (-48.794,59.187,4.024)
N3: (-49.560,57.826,5.724)
N7: (-52.615,57.843,7.615)
N9: (-50.716,56.660,7.524)
O5': (-51.415,54.701,11.479)
O3': (-47.798,56.030,10.918)
Image (generated by PyMOL):
PyMOL image
show in jmol