Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02728:02707
Extra
PDB:
ATOM 1 O3' U A2727 77.225 203.465 129.555 1.00 76.81 O
ATOM 2 P U A2728 75.971 202.479 129.410 1.00 78.29 P
ATOM 3 OP1 U A2728 75.821 202.240 127.952 1.00 78.91 O
ATOM 4 OP2 U A2728 74.818 203.004 130.186 1.00 78.24 O
ATOM 5 O5' U A2728 76.477 201.132 130.097 1.00 77.54 O
ATOM 6 C5' U A2728 75.547 200.106 130.487 1.00 77.47 C
ATOM 7 C4' U A2728 76.111 198.733 130.191 1.00 76.95 C
ATOM 8 O4' U A2728 76.173 198.514 128.751 1.00 74.85 O
ATOM 9 C3' U A2728 77.513 198.446 130.722 1.00 77.82 C
ATOM 10 O3' U A2728 77.584 197.072 131.067 1.00 81.93 O
ATOM 11 C2' U A2728 78.385 198.687 129.494 1.00 76.89 C
ATOM 12 O2' U A2728 79.623 198.003 129.542 1.00 75.21 O
ATOM 13 C1' U A2728 77.485 198.128 128.392 1.00 75.46 C
ATOM 14 N1 U A2728 77.783 198.607 127.031 1.00 74.55 N
ATOM 15 C2 U A2728 78.739 197.911 126.301 1.00 73.25 C
ATOM 16 O2 U A2728 79.342 196.945 126.741 1.00 72.50 O
ATOM 17 N3 U A2728 78.962 198.391 125.036 1.00 71.04 N
ATOM 18 C4 U A2728 78.346 199.464 124.435 1.00 71.20 C
ATOM 19 O4 U A2728 78.622 199.743 123.270 1.00 70.89 O
ATOM 20 C5 U A2728 77.383 200.136 125.251 1.00 72.30 C
ATOM 21 C6 U A2728 77.140 199.697 126.489 1.00 73.89 C
ATOM 22 P A A2729 78.105 196.632 132.518 1.00 84.53 P
ATOM 23 OP1 A A2729 77.949 197.780 133.446 1.00 83.98 O
ATOM 24 OP2 A A2729 79.440 195.999 132.350 1.00 84.21 O
ATOM 25 O5' A A2729 77.062 195.505 132.930 1.00 85.60 O
TER
ATOM 1 O3' G B2706 79.534 194.991 118.482 1.00 66.42 O
ATOM 2 P C B2707 80.706 196.031 118.100 1.00 68.56 P
ATOM 3 OP1 C B2707 81.642 195.333 117.185 1.00 68.29 O
ATOM 4 OP2 C B2707 81.237 196.634 119.354 1.00 70.05 O
ATOM 5 O5' C B2707 79.955 197.150 117.249 1.00 68.81 O
ATOM 6 C5' C B2707 79.413 196.834 115.955 1.00 71.82 C
ATOM 7 C4' C B2707 78.518 197.947 115.452 1.00 73.92 C
ATOM 8 O4' C B2707 77.374 198.128 116.325 1.00 74.07 O
ATOM 9 C3' C B2707 79.137 199.323 115.366 1.00 73.84 C
ATOM 10 O3' C B2707 79.898 199.453 114.182 1.00 78.14 O
ATOM 11 C2' C B2707 77.909 200.215 115.339 1.00 73.47 C
ATOM 12 O2' C B2707 77.297 200.216 114.071 1.00 73.40 O
ATOM 13 C1' C B2707 76.993 199.495 116.329 1.00 73.90 C
ATOM 14 N1 C B2707 77.098 200.013 117.712 1.00 75.61 N
ATOM 15 C2 C B2707 76.360 201.160 118.071 1.00 74.84 C
ATOM 16 O2 C B2707 75.636 201.711 117.219 1.00 74.18 O
ATOM 17 N3 C B2707 76.457 201.634 119.336 1.00 74.89 N
ATOM 18 C4 C B2707 77.242 201.017 120.226 1.00 75.09 C
ATOM 19 N4 C B2707 77.302 201.518 121.462 1.00 75.02 N
ATOM 20 C5 C B2707 78.000 199.858 119.889 1.00 74.74 C
ATOM 21 C6 C B2707 77.900 199.395 118.636 1.00 75.55 C
ATOM 22 P G B2708 81.275 200.273 114.216 1.00 82.84 P
ATOM 23 OP1 G B2708 81.711 200.447 112.808 1.00 81.15 O
ATOM 24 OP2 G B2708 82.186 199.617 115.196 1.00 81.69 O
ATOM 25 O5' G B2708 80.852 201.696 114.802 1.00 84.23 O
TER
ATOM 2 P U A2728 75.971 202.479 129.410 1.00 78.29 P
ATOM 3 OP1 U A2728 75.821 202.240 127.952 1.00 78.91 O
ATOM 4 OP2 U A2728 74.818 203.004 130.186 1.00 78.24 O
ATOM 5 O5' U A2728 76.477 201.132 130.097 1.00 77.54 O
ATOM 6 C5' U A2728 75.547 200.106 130.487 1.00 77.47 C
ATOM 7 C4' U A2728 76.111 198.733 130.191 1.00 76.95 C
ATOM 8 O4' U A2728 76.173 198.514 128.751 1.00 74.85 O
ATOM 9 C3' U A2728 77.513 198.446 130.722 1.00 77.82 C
ATOM 10 O3' U A2728 77.584 197.072 131.067 1.00 81.93 O
ATOM 11 C2' U A2728 78.385 198.687 129.494 1.00 76.89 C
ATOM 12 O2' U A2728 79.623 198.003 129.542 1.00 75.21 O
ATOM 13 C1' U A2728 77.485 198.128 128.392 1.00 75.46 C
ATOM 14 N1 U A2728 77.783 198.607 127.031 1.00 74.55 N
ATOM 15 C2 U A2728 78.739 197.911 126.301 1.00 73.25 C
ATOM 16 O2 U A2728 79.342 196.945 126.741 1.00 72.50 O
ATOM 17 N3 U A2728 78.962 198.391 125.036 1.00 71.04 N
ATOM 18 C4 U A2728 78.346 199.464 124.435 1.00 71.20 C
ATOM 19 O4 U A2728 78.622 199.743 123.270 1.00 70.89 O
ATOM 20 C5 U A2728 77.383 200.136 125.251 1.00 72.30 C
ATOM 21 C6 U A2728 77.140 199.697 126.489 1.00 73.89 C
ATOM 22 P A A2729 78.105 196.632 132.518 1.00 84.53 P
ATOM 23 OP1 A A2729 77.949 197.780 133.446 1.00 83.98 O
ATOM 24 OP2 A A2729 79.440 195.999 132.350 1.00 84.21 O
ATOM 25 O5' A A2729 77.062 195.505 132.930 1.00 85.60 O
TER
ATOM 1 O3' G B2706 79.534 194.991 118.482 1.00 66.42 O
ATOM 2 P C B2707 80.706 196.031 118.100 1.00 68.56 P
ATOM 3 OP1 C B2707 81.642 195.333 117.185 1.00 68.29 O
ATOM 4 OP2 C B2707 81.237 196.634 119.354 1.00 70.05 O
ATOM 5 O5' C B2707 79.955 197.150 117.249 1.00 68.81 O
ATOM 6 C5' C B2707 79.413 196.834 115.955 1.00 71.82 C
ATOM 7 C4' C B2707 78.518 197.947 115.452 1.00 73.92 C
ATOM 8 O4' C B2707 77.374 198.128 116.325 1.00 74.07 O
ATOM 9 C3' C B2707 79.137 199.323 115.366 1.00 73.84 C
ATOM 10 O3' C B2707 79.898 199.453 114.182 1.00 78.14 O
ATOM 11 C2' C B2707 77.909 200.215 115.339 1.00 73.47 C
ATOM 12 O2' C B2707 77.297 200.216 114.071 1.00 73.40 O
ATOM 13 C1' C B2707 76.993 199.495 116.329 1.00 73.90 C
ATOM 14 N1 C B2707 77.098 200.013 117.712 1.00 75.61 N
ATOM 15 C2 C B2707 76.360 201.160 118.071 1.00 74.84 C
ATOM 16 O2 C B2707 75.636 201.711 117.219 1.00 74.18 O
ATOM 17 N3 C B2707 76.457 201.634 119.336 1.00 74.89 N
ATOM 18 C4 C B2707 77.242 201.017 120.226 1.00 75.09 C
ATOM 19 N4 C B2707 77.302 201.518 121.462 1.00 75.02 N
ATOM 20 C5 C B2707 78.000 199.858 119.889 1.00 74.74 C
ATOM 21 C6 C B2707 77.900 199.395 118.636 1.00 75.55 C
ATOM 22 P G B2708 81.275 200.273 114.216 1.00 82.84 P
ATOM 23 OP1 G B2708 81.711 200.447 112.808 1.00 81.15 O
ATOM 24 OP2 G B2708 82.186 199.617 115.196 1.00 81.69 O
ATOM 25 O5' G B2708 80.852 201.696 114.802 1.00 84.23 O
TER
Atoms:
C4: (78.346,199.464,124.435)
N3: (78.962,198.391,125.036)
OP1: (75.821,202.240,127.952)
OP2: (74.818,203.004,130.186)
C2: (78.739,197.911,126.301)
C1': (77.485,198.128,128.392)
C3': (77.513,198.446,130.722)
O5': (76.477,201.132,130.097)
O4': (76.173,198.514,128.751)
C5': (75.547,200.106,130.487)
P: (75.971,202.479,129.410)
C4': (76.111,198.733,130.191)
C2': (78.385,198.687,129.494)
O2': (79.623,198.003,129.542)
N1: (77.783,198.607,127.031)
O4: (78.622,199.743,123.270)
O2: (79.342,196.945,126.741)
C6: (77.140,199.697,126.489)
C5: (77.383,200.136,125.251)
O3': (77.584,197.072,131.067)
N3: (78.962,198.391,125.036)
OP1: (75.821,202.240,127.952)
OP2: (74.818,203.004,130.186)
C2: (78.739,197.911,126.301)
C1': (77.485,198.128,128.392)
C3': (77.513,198.446,130.722)
O5': (76.477,201.132,130.097)
O4': (76.173,198.514,128.751)
C5': (75.547,200.106,130.487)
P: (75.971,202.479,129.410)
C4': (76.111,198.733,130.191)
C2': (78.385,198.687,129.494)
O2': (79.623,198.003,129.542)
N1: (77.783,198.607,127.031)
O4: (78.622,199.743,123.270)
O2: (79.342,196.945,126.741)
C6: (77.140,199.697,126.489)
C5: (77.383,200.136,125.251)
O3': (77.584,197.072,131.067)
C2: (76.360,201.160,118.071)
OP1: (81.642,195.333,117.185)
OP2: (81.237,196.634,119.354)
C4: (77.242,201.017,120.226)
O5': (79.955,197.150,117.249)
C3': (79.137,199.323,115.366)
C1': (76.993,199.495,116.329)
O4': (77.374,198.128,116.325)
C5': (79.413,196.834,115.955)
P: (80.706,196.031,118.100)
O2: (75.636,201.711,117.219)
C4': (78.518,197.947,115.452)
C2': (77.909,200.215,115.339)
O2': (77.297,200.216,114.071)
N1: (77.098,200.013,117.712)
N3: (76.457,201.634,119.336)
N4: (77.302,201.518,121.462)
C6: (77.900,199.395,118.636)
C5: (78.000,199.858,119.889)
O3': (79.898,199.453,114.182)
OP1: (81.642,195.333,117.185)
OP2: (81.237,196.634,119.354)
C4: (77.242,201.017,120.226)
O5': (79.955,197.150,117.249)
C3': (79.137,199.323,115.366)
C1': (76.993,199.495,116.329)
O4': (77.374,198.128,116.325)
C5': (79.413,196.834,115.955)
P: (80.706,196.031,118.100)
O2: (75.636,201.711,117.219)
C4': (78.518,197.947,115.452)
C2': (77.909,200.215,115.339)
O2': (77.297,200.216,114.071)
N1: (77.098,200.013,117.712)
N3: (76.457,201.634,119.336)
N4: (77.302,201.518,121.462)
C6: (77.900,199.395,118.636)
C5: (78.000,199.858,119.889)
O3': (79.898,199.453,114.182)
Image (generated by PyMOL):