Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02728:02707
Extra
PDB:
ATOM 1 O3' U A2727 76.960 203.282 129.180 1.00 73.85 O
ATOM 2 P U A2728 75.708 202.289 129.063 1.00 73.71 P
ATOM 3 OP1 U A2728 75.429 202.147 127.609 1.00 73.58 O
ATOM 4 OP2 U A2728 74.635 202.752 129.969 1.00 74.40 O
ATOM 5 O5' U A2728 76.284 200.913 129.626 1.00 73.47 O
ATOM 6 C5' U A2728 75.408 199.844 130.015 1.00 73.03 C
ATOM 7 C4' U A2728 76.041 198.507 129.705 1.00 73.11 C
ATOM 8 O4' U A2728 76.117 198.318 128.262 1.00 72.58 O
ATOM 9 C3' U A2728 77.459 198.287 130.229 1.00 73.96 C
ATOM 10 O3' U A2728 77.607 196.909 130.529 1.00 77.37 O
ATOM 11 C2' U A2728 78.311 198.572 128.999 1.00 72.67 C
ATOM 12 O2' U A2728 79.570 197.930 129.044 1.00 71.47 O
ATOM 13 C1' U A2728 77.436 197.953 127.914 1.00 72.15 C
ATOM 14 N1 U A2728 77.726 198.379 126.537 1.00 71.39 N
ATOM 15 C2 U A2728 78.696 197.670 125.843 1.00 70.55 C
ATOM 16 O2 U A2728 79.306 196.731 126.326 1.00 69.59 O
ATOM 17 N3 U A2728 78.926 198.103 124.563 1.00 69.88 N
ATOM 18 C4 U A2728 78.300 199.146 123.916 1.00 70.33 C
ATOM 19 O4 U A2728 78.601 199.400 122.750 1.00 69.51 O
ATOM 20 C5 U A2728 77.315 199.829 124.698 1.00 71.34 C
ATOM 21 C6 U A2728 77.068 199.433 125.950 1.00 71.23 C
ATOM 22 P A A2729 78.194 196.450 131.947 1.00 79.70 P
ATOM 23 OP1 A A2729 77.978 197.555 132.916 1.00 79.49 O
ATOM 24 OP2 A A2729 79.567 195.905 131.744 1.00 77.72 O
ATOM 25 O5' A A2729 77.224 195.248 132.334 1.00 80.99 O
TER
ATOM 1 O3' G B2706 79.153 194.659 118.027 1.00 67.33 O
ATOM 2 P C B2707 80.345 195.637 117.570 1.00 68.94 P
ATOM 3 OP1 C B2707 81.180 194.865 116.614 1.00 68.62 O
ATOM 4 OP2 C B2707 80.979 196.227 118.781 1.00 70.24 O
ATOM 5 O5' C B2707 79.610 196.793 116.761 1.00 67.58 O
ATOM 6 C5' C B2707 79.011 196.516 115.491 1.00 69.00 C
ATOM 7 C4' C B2707 78.167 197.678 115.038 1.00 70.84 C
ATOM 8 O4' C B2707 77.080 197.896 115.970 1.00 71.75 O
ATOM 9 C3' C B2707 78.857 199.024 114.967 1.00 71.79 C
ATOM 10 O3' C B2707 79.604 199.145 113.765 1.00 74.65 O
ATOM 11 C2' C B2707 77.675 199.982 115.001 1.00 71.95 C
ATOM 12 O2' C B2707 77.010 200.062 113.759 1.00 71.24 O
ATOM 13 C1' C B2707 76.746 199.274 115.987 1.00 73.04 C
ATOM 14 N1 C B2707 76.838 199.774 117.372 1.00 75.50 N
ATOM 15 C2 C B2707 76.072 200.894 117.739 1.00 76.42 C
ATOM 16 O2 C B2707 75.352 201.445 116.884 1.00 77.23 O
ATOM 17 N3 C B2707 76.136 201.346 119.014 1.00 76.83 N
ATOM 18 C4 C B2707 76.924 200.733 119.901 1.00 76.59 C
ATOM 19 N4 C B2707 76.954 201.211 121.147 1.00 77.07 N
ATOM 20 C5 C B2707 77.718 199.603 119.553 1.00 76.17 C
ATOM 21 C6 C B2707 77.646 199.162 118.291 1.00 76.05 C
ATOM 22 P G B2708 81.006 199.926 113.777 1.00 77.98 P
ATOM 23 OP1 G B2708 81.426 200.115 112.362 1.00 75.67 O
ATOM 24 OP2 G B2708 81.916 199.234 114.733 1.00 75.91 O
ATOM 25 O5' G B2708 80.636 201.359 114.371 1.00 79.44 O
TER
ATOM 2 P U A2728 75.708 202.289 129.063 1.00 73.71 P
ATOM 3 OP1 U A2728 75.429 202.147 127.609 1.00 73.58 O
ATOM 4 OP2 U A2728 74.635 202.752 129.969 1.00 74.40 O
ATOM 5 O5' U A2728 76.284 200.913 129.626 1.00 73.47 O
ATOM 6 C5' U A2728 75.408 199.844 130.015 1.00 73.03 C
ATOM 7 C4' U A2728 76.041 198.507 129.705 1.00 73.11 C
ATOM 8 O4' U A2728 76.117 198.318 128.262 1.00 72.58 O
ATOM 9 C3' U A2728 77.459 198.287 130.229 1.00 73.96 C
ATOM 10 O3' U A2728 77.607 196.909 130.529 1.00 77.37 O
ATOM 11 C2' U A2728 78.311 198.572 128.999 1.00 72.67 C
ATOM 12 O2' U A2728 79.570 197.930 129.044 1.00 71.47 O
ATOM 13 C1' U A2728 77.436 197.953 127.914 1.00 72.15 C
ATOM 14 N1 U A2728 77.726 198.379 126.537 1.00 71.39 N
ATOM 15 C2 U A2728 78.696 197.670 125.843 1.00 70.55 C
ATOM 16 O2 U A2728 79.306 196.731 126.326 1.00 69.59 O
ATOM 17 N3 U A2728 78.926 198.103 124.563 1.00 69.88 N
ATOM 18 C4 U A2728 78.300 199.146 123.916 1.00 70.33 C
ATOM 19 O4 U A2728 78.601 199.400 122.750 1.00 69.51 O
ATOM 20 C5 U A2728 77.315 199.829 124.698 1.00 71.34 C
ATOM 21 C6 U A2728 77.068 199.433 125.950 1.00 71.23 C
ATOM 22 P A A2729 78.194 196.450 131.947 1.00 79.70 P
ATOM 23 OP1 A A2729 77.978 197.555 132.916 1.00 79.49 O
ATOM 24 OP2 A A2729 79.567 195.905 131.744 1.00 77.72 O
ATOM 25 O5' A A2729 77.224 195.248 132.334 1.00 80.99 O
TER
ATOM 1 O3' G B2706 79.153 194.659 118.027 1.00 67.33 O
ATOM 2 P C B2707 80.345 195.637 117.570 1.00 68.94 P
ATOM 3 OP1 C B2707 81.180 194.865 116.614 1.00 68.62 O
ATOM 4 OP2 C B2707 80.979 196.227 118.781 1.00 70.24 O
ATOM 5 O5' C B2707 79.610 196.793 116.761 1.00 67.58 O
ATOM 6 C5' C B2707 79.011 196.516 115.491 1.00 69.00 C
ATOM 7 C4' C B2707 78.167 197.678 115.038 1.00 70.84 C
ATOM 8 O4' C B2707 77.080 197.896 115.970 1.00 71.75 O
ATOM 9 C3' C B2707 78.857 199.024 114.967 1.00 71.79 C
ATOM 10 O3' C B2707 79.604 199.145 113.765 1.00 74.65 O
ATOM 11 C2' C B2707 77.675 199.982 115.001 1.00 71.95 C
ATOM 12 O2' C B2707 77.010 200.062 113.759 1.00 71.24 O
ATOM 13 C1' C B2707 76.746 199.274 115.987 1.00 73.04 C
ATOM 14 N1 C B2707 76.838 199.774 117.372 1.00 75.50 N
ATOM 15 C2 C B2707 76.072 200.894 117.739 1.00 76.42 C
ATOM 16 O2 C B2707 75.352 201.445 116.884 1.00 77.23 O
ATOM 17 N3 C B2707 76.136 201.346 119.014 1.00 76.83 N
ATOM 18 C4 C B2707 76.924 200.733 119.901 1.00 76.59 C
ATOM 19 N4 C B2707 76.954 201.211 121.147 1.00 77.07 N
ATOM 20 C5 C B2707 77.718 199.603 119.553 1.00 76.17 C
ATOM 21 C6 C B2707 77.646 199.162 118.291 1.00 76.05 C
ATOM 22 P G B2708 81.006 199.926 113.777 1.00 77.98 P
ATOM 23 OP1 G B2708 81.426 200.115 112.362 1.00 75.67 O
ATOM 24 OP2 G B2708 81.916 199.234 114.733 1.00 75.91 O
ATOM 25 O5' G B2708 80.636 201.359 114.371 1.00 79.44 O
TER
Atoms:
C4: (78.300,199.146,123.916)
N3: (78.926,198.103,124.563)
OP1: (75.429,202.147,127.609)
OP2: (74.635,202.752,129.969)
C2: (78.696,197.670,125.843)
C1': (77.436,197.953,127.914)
C3': (77.459,198.287,130.229)
O5': (76.284,200.913,129.626)
O4': (76.117,198.318,128.262)
C5': (75.408,199.844,130.015)
P: (75.708,202.289,129.063)
C4': (76.041,198.507,129.705)
C2': (78.311,198.572,128.999)
O2': (79.570,197.930,129.044)
N1: (77.726,198.379,126.537)
O4: (78.601,199.400,122.750)
O2: (79.306,196.731,126.326)
C6: (77.068,199.433,125.950)
C5: (77.315,199.829,124.698)
O3': (77.607,196.909,130.529)
N3: (78.926,198.103,124.563)
OP1: (75.429,202.147,127.609)
OP2: (74.635,202.752,129.969)
C2: (78.696,197.670,125.843)
C1': (77.436,197.953,127.914)
C3': (77.459,198.287,130.229)
O5': (76.284,200.913,129.626)
O4': (76.117,198.318,128.262)
C5': (75.408,199.844,130.015)
P: (75.708,202.289,129.063)
C4': (76.041,198.507,129.705)
C2': (78.311,198.572,128.999)
O2': (79.570,197.930,129.044)
N1: (77.726,198.379,126.537)
O4: (78.601,199.400,122.750)
O2: (79.306,196.731,126.326)
C6: (77.068,199.433,125.950)
C5: (77.315,199.829,124.698)
O3': (77.607,196.909,130.529)
C2: (76.072,200.894,117.739)
OP1: (81.180,194.865,116.614)
OP2: (80.979,196.227,118.781)
C4: (76.924,200.733,119.901)
O5': (79.610,196.793,116.761)
C3': (78.857,199.024,114.967)
C1': (76.746,199.274,115.987)
O4': (77.080,197.896,115.970)
C5': (79.011,196.516,115.491)
P: (80.345,195.637,117.570)
O2: (75.352,201.445,116.884)
C4': (78.167,197.678,115.038)
C2': (77.675,199.982,115.001)
O2': (77.010,200.062,113.759)
N1: (76.838,199.774,117.372)
N3: (76.136,201.346,119.014)
N4: (76.954,201.211,121.147)
C6: (77.646,199.162,118.291)
C5: (77.718,199.603,119.553)
O3': (79.604,199.145,113.765)
OP1: (81.180,194.865,116.614)
OP2: (80.979,196.227,118.781)
C4: (76.924,200.733,119.901)
O5': (79.610,196.793,116.761)
C3': (78.857,199.024,114.967)
C1': (76.746,199.274,115.987)
O4': (77.080,197.896,115.970)
C5': (79.011,196.516,115.491)
P: (80.345,195.637,117.570)
O2: (75.352,201.445,116.884)
C4': (78.167,197.678,115.038)
C2': (77.675,199.982,115.001)
O2': (77.010,200.062,113.759)
N1: (76.838,199.774,117.372)
N3: (76.136,201.346,119.014)
N4: (76.954,201.211,121.147)
C6: (77.646,199.162,118.291)
C5: (77.718,199.603,119.553)
O3': (79.604,199.145,113.765)
Image (generated by PyMOL):