Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JID:B12:B15
Extra
PDB:
ATOM 1 O3' G A 11 12.043 1.001 37.882 1.00 20.35 O
ATOM 2 P G A 12 12.066 1.936 39.164 1.00 22.81 P
ATOM 3 OP1 G A 12 11.710 1.077 40.290 1.00 25.06 O
ATOM 4 OP2 G A 12 11.338 3.197 38.960 1.00 22.33 O
ATOM 5 O5' G A 12 13.599 2.381 39.333 1.00 19.06 O
ATOM 6 C5' G A 12 14.629 1.437 39.611 1.00 18.30 C
ATOM 7 C4' G A 12 15.983 2.141 39.547 1.00 17.93 C
ATOM 8 O4' G A 12 16.228 2.556 38.187 1.00 18.30 O
ATOM 9 C3' G A 12 16.069 3.465 40.312 1.00 19.18 C
ATOM 10 O3' G A 12 16.304 3.182 41.693 1.00 17.35 O
ATOM 11 C2' G A 12 17.290 4.106 39.640 1.00 17.94 C
ATOM 12 O2' G A 12 18.486 3.526 40.134 1.00 19.11 O
ATOM 13 C1' G A 12 17.065 3.703 38.174 1.00 19.71 C
ATOM 14 N9 G A 12 16.352 4.807 37.519 1.00 17.94 N
ATOM 15 C8 G A 12 14.985 5.019 37.370 1.00 19.79 C
ATOM 16 N7 G A 12 14.699 6.224 36.913 1.00 17.43 N
ATOM 17 C5 G A 12 15.949 6.798 36.702 1.00 18.09 C
ATOM 18 C6 G A 12 16.310 8.083 36.194 1.00 18.51 C
ATOM 19 O6 G A 12 15.553 9.007 35.748 1.00 16.73 O
ATOM 20 N1 G A 12 17.697 8.249 36.203 1.00 16.95 N
ATOM 21 C2 G A 12 18.630 7.297 36.566 1.00 18.85 C
ATOM 22 N2 G A 12 19.968 7.663 36.506 1.00 15.56 N
ATOM 23 N3 G A 12 18.310 6.078 36.977 1.00 16.94 N
ATOM 24 C4 G A 12 16.968 5.910 37.042 1.00 18.26 C
ATOM 25 P G A 13 15.723 4.163 42.831 1.00 18.64 P
ATOM 26 OP1 G A 13 15.617 3.475 44.158 1.00 18.08 O
ATOM 27 OP2 G A 13 14.517 4.909 42.304 1.00 18.09 O
ATOM 28 O5' G A 13 16.886 5.259 42.989 1.00 19.14 O
TER
ATOM 1 O3' A B 14 22.740 11.141 38.064 1.00 17.14 O
ATOM 2 P G B 15 22.603 10.952 36.499 1.00 16.25 P
ATOM 3 OP1 G B 15 22.441 12.297 35.861 1.00 15.89 O
ATOM 4 OP2 G B 15 21.570 9.919 36.192 1.00 14.36 O
ATOM 5 O5' G B 15 24.038 10.390 36.050 1.00 15.40 O
ATOM 6 C5' G B 15 25.208 11.229 36.175 1.00 14.61 C
ATOM 7 C4' G B 15 26.446 10.412 35.873 1.00 15.30 C
ATOM 8 O4' G B 15 26.644 9.450 36.942 1.00 14.45 O
ATOM 9 C3' G B 15 26.380 9.557 34.625 1.00 14.04 C
ATOM 10 O3' G B 15 26.625 10.347 33.474 1.00 14.15 O
ATOM 11 C2' G B 15 27.469 8.518 34.905 1.00 14.78 C
ATOM 12 O2' G B 15 28.752 9.105 34.728 1.00 17.30 O
ATOM 13 C1' G B 15 27.216 8.240 36.398 1.00 15.96 C
ATOM 14 N9 G B 15 26.247 7.150 36.584 1.00 16.44 N
ATOM 15 C8 G B 15 24.886 7.274 36.752 1.00 14.84 C
ATOM 16 N7 G B 15 24.267 6.113 36.851 1.00 16.99 N
ATOM 17 C5 G B 15 25.284 5.173 36.740 1.00 16.50 C
ATOM 18 C6 G B 15 25.235 3.744 36.753 1.00 18.94 C
ATOM 19 O6 G B 15 24.248 3.011 36.895 1.00 20.26 O
ATOM 20 N1 G B 15 26.517 3.177 36.601 1.00 17.93 N
ATOM 21 C2 G B 15 27.680 3.889 36.508 1.00 17.98 C
ATOM 22 N2 G B 15 28.825 3.151 36.520 1.00 18.20 N
ATOM 23 N3 G B 15 27.741 5.224 36.455 1.00 16.60 N
ATOM 24 C4 G B 15 26.516 5.795 36.584 1.00 16.64 C
ATOM 25 P C B 16 25.817 10.060 32.144 1.00 17.43 P
ATOM 26 OP1 C B 16 26.408 10.861 31.063 1.00 16.34 O
ATOM 27 OP2 C B 16 24.364 10.202 32.379 1.00 18.02 O
ATOM 28 O5' C B 16 26.134 8.503 31.910 1.00 16.89 O
TER
ATOM 2 P G A 12 12.066 1.936 39.164 1.00 22.81 P
ATOM 3 OP1 G A 12 11.710 1.077 40.290 1.00 25.06 O
ATOM 4 OP2 G A 12 11.338 3.197 38.960 1.00 22.33 O
ATOM 5 O5' G A 12 13.599 2.381 39.333 1.00 19.06 O
ATOM 6 C5' G A 12 14.629 1.437 39.611 1.00 18.30 C
ATOM 7 C4' G A 12 15.983 2.141 39.547 1.00 17.93 C
ATOM 8 O4' G A 12 16.228 2.556 38.187 1.00 18.30 O
ATOM 9 C3' G A 12 16.069 3.465 40.312 1.00 19.18 C
ATOM 10 O3' G A 12 16.304 3.182 41.693 1.00 17.35 O
ATOM 11 C2' G A 12 17.290 4.106 39.640 1.00 17.94 C
ATOM 12 O2' G A 12 18.486 3.526 40.134 1.00 19.11 O
ATOM 13 C1' G A 12 17.065 3.703 38.174 1.00 19.71 C
ATOM 14 N9 G A 12 16.352 4.807 37.519 1.00 17.94 N
ATOM 15 C8 G A 12 14.985 5.019 37.370 1.00 19.79 C
ATOM 16 N7 G A 12 14.699 6.224 36.913 1.00 17.43 N
ATOM 17 C5 G A 12 15.949 6.798 36.702 1.00 18.09 C
ATOM 18 C6 G A 12 16.310 8.083 36.194 1.00 18.51 C
ATOM 19 O6 G A 12 15.553 9.007 35.748 1.00 16.73 O
ATOM 20 N1 G A 12 17.697 8.249 36.203 1.00 16.95 N
ATOM 21 C2 G A 12 18.630 7.297 36.566 1.00 18.85 C
ATOM 22 N2 G A 12 19.968 7.663 36.506 1.00 15.56 N
ATOM 23 N3 G A 12 18.310 6.078 36.977 1.00 16.94 N
ATOM 24 C4 G A 12 16.968 5.910 37.042 1.00 18.26 C
ATOM 25 P G A 13 15.723 4.163 42.831 1.00 18.64 P
ATOM 26 OP1 G A 13 15.617 3.475 44.158 1.00 18.08 O
ATOM 27 OP2 G A 13 14.517 4.909 42.304 1.00 18.09 O
ATOM 28 O5' G A 13 16.886 5.259 42.989 1.00 19.14 O
TER
ATOM 1 O3' A B 14 22.740 11.141 38.064 1.00 17.14 O
ATOM 2 P G B 15 22.603 10.952 36.499 1.00 16.25 P
ATOM 3 OP1 G B 15 22.441 12.297 35.861 1.00 15.89 O
ATOM 4 OP2 G B 15 21.570 9.919 36.192 1.00 14.36 O
ATOM 5 O5' G B 15 24.038 10.390 36.050 1.00 15.40 O
ATOM 6 C5' G B 15 25.208 11.229 36.175 1.00 14.61 C
ATOM 7 C4' G B 15 26.446 10.412 35.873 1.00 15.30 C
ATOM 8 O4' G B 15 26.644 9.450 36.942 1.00 14.45 O
ATOM 9 C3' G B 15 26.380 9.557 34.625 1.00 14.04 C
ATOM 10 O3' G B 15 26.625 10.347 33.474 1.00 14.15 O
ATOM 11 C2' G B 15 27.469 8.518 34.905 1.00 14.78 C
ATOM 12 O2' G B 15 28.752 9.105 34.728 1.00 17.30 O
ATOM 13 C1' G B 15 27.216 8.240 36.398 1.00 15.96 C
ATOM 14 N9 G B 15 26.247 7.150 36.584 1.00 16.44 N
ATOM 15 C8 G B 15 24.886 7.274 36.752 1.00 14.84 C
ATOM 16 N7 G B 15 24.267 6.113 36.851 1.00 16.99 N
ATOM 17 C5 G B 15 25.284 5.173 36.740 1.00 16.50 C
ATOM 18 C6 G B 15 25.235 3.744 36.753 1.00 18.94 C
ATOM 19 O6 G B 15 24.248 3.011 36.895 1.00 20.26 O
ATOM 20 N1 G B 15 26.517 3.177 36.601 1.00 17.93 N
ATOM 21 C2 G B 15 27.680 3.889 36.508 1.00 17.98 C
ATOM 22 N2 G B 15 28.825 3.151 36.520 1.00 18.20 N
ATOM 23 N3 G B 15 27.741 5.224 36.455 1.00 16.60 N
ATOM 24 C4 G B 15 26.516 5.795 36.584 1.00 16.64 C
ATOM 25 P C B 16 25.817 10.060 32.144 1.00 17.43 P
ATOM 26 OP1 C B 16 26.408 10.861 31.063 1.00 16.34 O
ATOM 27 OP2 C B 16 24.364 10.202 32.379 1.00 18.02 O
ATOM 28 O5' C B 16 26.134 8.503 31.910 1.00 16.89 O
TER
Atoms:
OP1: (11.710,1.077,40.290)
OP2: (11.338,3.197,38.960)
C3': (16.069,3.465,40.312)
C1': (17.065,3.703,38.174)
C5': (14.629,1.437,39.611)
O6: (15.553,9.007,35.748)
O4': (16.228,2.556,38.187)
C8: (14.985,5.019,37.370)
C2: (18.630,7.297,36.566)
C6: (16.310,8.083,36.194)
C5: (15.949,6.798,36.702)
C4: (16.968,5.910,37.042)
P: (12.066,1.936,39.164)
C4': (15.983,2.141,39.547)
C2': (17.290,4.106,39.640)
O2': (18.486,3.526,40.134)
N1: (17.697,8.249,36.203)
N2: (19.968,7.663,36.506)
N3: (18.310,6.078,36.977)
N7: (14.699,6.224,36.913)
N9: (16.352,4.807,37.519)
O5': (13.599,2.381,39.333)
O3': (16.304,3.182,41.693)
OP2: (11.338,3.197,38.960)
C3': (16.069,3.465,40.312)
C1': (17.065,3.703,38.174)
C5': (14.629,1.437,39.611)
O6: (15.553,9.007,35.748)
O4': (16.228,2.556,38.187)
C8: (14.985,5.019,37.370)
C2: (18.630,7.297,36.566)
C6: (16.310,8.083,36.194)
C5: (15.949,6.798,36.702)
C4: (16.968,5.910,37.042)
P: (12.066,1.936,39.164)
C4': (15.983,2.141,39.547)
C2': (17.290,4.106,39.640)
O2': (18.486,3.526,40.134)
N1: (17.697,8.249,36.203)
N2: (19.968,7.663,36.506)
N3: (18.310,6.078,36.977)
N7: (14.699,6.224,36.913)
N9: (16.352,4.807,37.519)
O5': (13.599,2.381,39.333)
O3': (16.304,3.182,41.693)
OP1: (22.441,12.297,35.861)
OP2: (21.570,9.919,36.192)
C3': (26.380,9.557,34.625)
C1': (27.216,8.240,36.398)
C5': (25.208,11.229,36.175)
O6: (24.248,3.011,36.895)
O4': (26.644,9.450,36.942)
C8: (24.886,7.274,36.752)
C2: (27.680,3.889,36.508)
C6: (25.235,3.744,36.753)
C5: (25.284,5.173,36.740)
C4: (26.516,5.795,36.584)
P: (22.603,10.952,36.499)
C4': (26.446,10.412,35.873)
C2': (27.469,8.518,34.905)
O2': (28.752,9.105,34.728)
N1: (26.517,3.177,36.601)
N2: (28.825,3.151,36.520)
N3: (27.741,5.224,36.455)
N7: (24.267,6.113,36.851)
N9: (26.247,7.150,36.584)
O5': (24.038,10.390,36.050)
O3': (26.625,10.347,33.474)
OP2: (21.570,9.919,36.192)
C3': (26.380,9.557,34.625)
C1': (27.216,8.240,36.398)
C5': (25.208,11.229,36.175)
O6: (24.248,3.011,36.895)
O4': (26.644,9.450,36.942)
C8: (24.886,7.274,36.752)
C2: (27.680,3.889,36.508)
C6: (25.235,3.744,36.753)
C5: (25.284,5.173,36.740)
C4: (26.516,5.795,36.584)
P: (22.603,10.952,36.499)
C4': (26.446,10.412,35.873)
C2': (27.469,8.518,34.905)
O2': (28.752,9.105,34.728)
N1: (26.517,3.177,36.601)
N2: (28.825,3.151,36.520)
N3: (27.741,5.224,36.455)
N7: (24.267,6.113,36.851)
N9: (26.247,7.150,36.584)
O5': (24.038,10.390,36.050)
O3': (26.625,10.347,33.474)
Image (generated by PyMOL):