ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1735:A1718

Extra

PDB:
ATOM 1 O3' A A1734 109.998 156.790 103.886 1.00 56.27 O
ATOM 2 P G A1735 108.730 157.310 103.057 1.00 55.07 P
ATOM 3 OP1 G A1735 107.721 156.223 103.079 1.00 56.51 O
ATOM 4 OP2 G A1735 109.238 157.818 101.770 1.00 55.03 O
ATOM 5 O5' G A1735 108.190 158.540 103.905 1.00 54.96 O
ATOM 6 C5' G A1735 108.980 159.728 104.034 1.00 56.44 C
ATOM 7 C4' G A1735 108.662 160.421 105.326 1.00 56.64 C
ATOM 8 O4' G A1735 107.311 160.935 105.271 1.00 57.10 O
ATOM 9 C3' G A1735 108.726 159.562 106.582 1.00 56.75 C
ATOM 10 O3' G A1735 109.140 160.435 107.618 1.00 56.11 O
ATOM 11 C2' G A1735 107.275 159.104 106.759 1.00 56.57 C
ATOM 12 O2' G A1735 106.889 158.780 108.090 1.00 55.23 O
ATOM 13 C1' G A1735 106.543 160.359 106.308 1.00 56.91 C
ATOM 14 N9 G A1735 105.203 160.149 105.793 1.00 56.96 N
ATOM 15 C8 G A1735 104.797 159.266 104.826 1.00 56.81 C
ATOM 16 N7 G A1735 103.538 159.397 104.523 1.00 56.93 N
ATOM 17 C5 G A1735 103.093 160.414 105.362 1.00 56.59 C
ATOM 18 C6 G A1735 101.829 161.027 105.485 1.00 57.12 C
ATOM 19 O6 G A1735 100.801 160.814 104.835 1.00 60.18 O
ATOM 20 N1 G A1735 101.832 162.005 106.476 1.00 56.04 N
ATOM 21 C2 G A1735 102.917 162.368 107.228 1.00 55.17 C
ATOM 22 N2 G A1735 102.738 163.342 108.134 1.00 54.46 N
ATOM 23 N3 G A1735 104.093 161.820 107.104 1.00 55.30 N
ATOM 24 C4 G A1735 104.109 160.860 106.163 1.00 55.76 C
ATOM 25 P A A1736 110.289 159.970 108.623 1.00 54.94 P
ATOM 26 OP1 A A1736 110.571 161.183 109.433 1.00 54.59 O
ATOM 27 OP2 A A1736 111.399 159.330 107.864 1.00 54.62 O
ATOM 28 O5' A A1736 109.574 158.823 109.476 1.00 55.33 O
TER

ATOM 1 O3' A B1717 98.508 164.928 107.392 1.00 41.49 O
ATOM 2 P G B1718 99.915 165.327 106.752 1.00 43.40 P
ATOM 3 OP1 G B1718 100.299 164.307 105.734 1.00 41.23 O
ATOM 4 OP2 G B1718 100.810 165.612 107.883 1.00 43.47 O
ATOM 5 O5' G B1718 99.645 166.711 106.019 1.00 44.57 O
ATOM 6 C5' G B1718 99.338 166.758 104.618 1.00 43.90 C
ATOM 7 C4' G B1718 99.154 168.183 104.184 1.00 43.20 C
ATOM 8 O4' G B1718 98.162 168.800 105.037 1.00 42.27 O
ATOM 9 C3' G B1718 100.378 169.060 104.326 1.00 43.33 C
ATOM 10 O3' G B1718 101.196 168.879 103.170 1.00 46.42 O
ATOM 11 C2' G B1718 99.746 170.441 104.438 1.00 42.45 C
ATOM 12 O2' G B1718 99.221 170.871 103.198 1.00 41.62 O
ATOM 13 C1' G B1718 98.529 170.135 105.310 1.00 43.09 C
ATOM 14 N9 G B1718 98.754 170.227 106.746 1.00 45.35 N
ATOM 15 C8 G B1718 98.350 169.306 107.683 1.00 46.37 C
ATOM 16 N7 G B1718 98.726 169.608 108.892 1.00 47.44 N
ATOM 17 C5 G B1718 99.403 170.812 108.752 1.00 46.82 C
ATOM 18 C6 G B1718 100.030 171.611 109.722 1.00 45.97 C
ATOM 19 O6 G B1718 100.088 171.419 110.941 1.00 44.32 O
ATOM 20 N1 G B1718 100.631 172.735 109.155 1.00 45.41 N
ATOM 21 C2 G B1718 100.619 173.044 107.820 1.00 46.17 C
ATOM 22 N2 G B1718 101.319 174.120 107.456 1.00 46.74 N
ATOM 23 N3 G B1718 99.988 172.326 106.903 1.00 46.52 N
ATOM 24 C4 G B1718 99.420 171.218 107.435 1.00 46.51 C
ATOM 25 P U B1719 102.710 168.356 103.331 1.00 48.79 P
ATOM 26 OP1 U B1719 103.276 168.182 101.966 1.00 48.59 O
ATOM 27 OP2 U B1719 102.766 167.221 104.292 1.00 49.26 O
ATOM 28 O5' U B1719 103.433 169.627 103.948 1.00 49.67 O
TER

Atoms:
OP1: (107.721,156.223,103.079)
OP2: (109.238,157.818,101.770)
C3': (108.726,159.562,106.582)
C1': (106.543,160.359,106.308)
C5': (108.980,159.728,104.034)
O6: (100.801,160.814,104.835)
O4': (107.311,160.935,105.271)
C8: (104.797,159.266,104.826)
C2: (102.917,162.368,107.228)
C6: (101.829,161.027,105.485)
C5: (103.093,160.414,105.362)
C4: (104.109,160.860,106.163)
P: (108.730,157.310,103.057)
C4': (108.662,160.421,105.326)
C2': (107.275,159.104,106.759)
O2': (106.889,158.780,108.090)
N1: (101.832,162.005,106.476)
N2: (102.738,163.342,108.134)
N3: (104.093,161.820,107.104)
N7: (103.538,159.397,104.523)
N9: (105.203,160.149,105.793)
O5': (108.190,158.540,103.905)
O3': (109.140,160.435,107.618)
OP1: (100.299,164.307,105.734)
OP2: (100.810,165.612,107.883)
C3': (100.378,169.060,104.326)
C1': (98.529,170.135,105.310)
C5': (99.338,166.758,104.618)
O6: (100.088,171.419,110.941)
O4': (98.162,168.800,105.037)
C8: (98.350,169.306,107.683)
C2: (100.619,173.044,107.820)
C6: (100.030,171.611,109.722)
C5: (99.403,170.812,108.752)
C4: (99.420,171.218,107.435)
P: (99.915,165.327,106.752)
C4': (99.154,168.183,104.184)
C2': (99.746,170.441,104.438)
O2': (99.221,170.871,103.198)
N1: (100.631,172.735,109.155)
N2: (101.319,174.120,107.456)
N3: (99.988,172.326,106.903)
N7: (98.726,169.608,108.892)
N9: (98.754,170.227,106.746)
O5': (99.645,166.711,106.019)
O3': (101.196,168.879,103.170)
Image (generated by PyMOL):
PyMOL image
show in jmol