Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E7:D12
Extra
PDB:
ATOM 1 O3' A A 6 4.635 33.311 125.185 1.00 97.48 O
ATOM 2 P G A 7 3.111 33.173 124.702 1.00112.13 P
ATOM 3 OP1 G A 7 2.464 34.505 124.809 1.00104.54 O
ATOM 4 OP2 G A 7 2.526 32.009 125.424 1.00 99.53 O
ATOM 5 O5' G A 7 3.230 32.797 123.157 1.00106.54 O
ATOM 6 C5' G A 7 3.935 33.642 122.251 1.00 85.91 C
ATOM 7 C4' G A 7 4.277 32.886 120.987 1.00 95.68 C
ATOM 8 O4' G A 7 5.133 31.761 121.322 1.00 98.52 O
ATOM 9 C3' G A 7 3.114 32.263 120.226 1.00 88.61 C
ATOM 10 O3' G A 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 11 C2' G A 7 3.810 31.153 119.444 1.00 87.51 C
ATOM 12 O2' G A 7 4.484 31.635 118.295 1.00 60.82 O
ATOM 13 C1' G A 7 4.854 30.675 120.456 1.00 84.55 C
ATOM 14 N9 G A 7 4.459 29.531 121.274 1.00 85.97 N
ATOM 15 C8 G A 7 4.028 29.555 122.580 1.00 88.27 C
ATOM 16 N7 G A 7 3.787 28.366 123.063 1.00 82.87 N
ATOM 17 C5 G A 7 4.065 27.504 122.010 1.00 82.09 C
ATOM 18 C6 G A 7 3.990 26.086 121.936 1.00 81.78 C
ATOM 19 O6 G A 7 3.654 25.281 122.817 1.00 84.68 O
ATOM 20 N1 G A 7 4.360 25.622 120.679 1.00 75.69 N
ATOM 21 C2 G A 7 4.754 26.411 119.630 1.00 82.02 C
ATOM 22 N2 G A 7 5.075 25.770 118.499 1.00 85.23 N
ATOM 23 N3 G A 7 4.828 27.732 119.684 1.00 83.68 N
ATOM 24 C4 G A 7 4.473 28.207 120.895 1.00 82.96 C
ATOM 25 P A A 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 26 OP1 A A 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 27 OP2 A A 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 28 O5' A A 8 1.520 32.704 117.119 1.00 82.36 O
TER
ATOM 1 P G B 12 5.725 21.557 117.771 1.00 65.22 P
ATOM 2 OP1 G B 12 6.793 21.393 118.787 1.00 77.62 O
ATOM 3 OP2 G B 12 5.095 22.882 117.574 1.00 88.29 O
ATOM 4 O5' G B 12 6.314 21.112 116.362 1.00 81.59 O
ATOM 5 C5' G B 12 5.703 20.055 115.635 1.00 62.73 C
ATOM 6 C4' G B 12 6.748 19.210 114.949 1.00 53.79 C
ATOM 7 O4' G B 12 6.093 18.092 114.314 1.00 68.29 O
ATOM 8 C3' G B 12 7.445 19.992 113.843 1.00 43.93 C
ATOM 9 O3' G B 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 10 C2' G B 12 6.703 19.621 112.562 1.00 39.70 C
ATOM 11 O2' G B 12 7.587 19.470 111.471 1.00 47.76 O
ATOM 12 C1' G B 12 6.159 18.238 112.922 1.00 54.80 C
ATOM 13 N9 G B 12 4.925 17.760 112.314 1.00 61.01 N
ATOM 14 C8 G B 12 4.684 16.473 111.909 1.00 66.53 C
ATOM 15 N7 G B 12 3.535 16.328 111.314 1.00 75.29 N
ATOM 16 C5 G B 12 2.973 17.593 111.346 1.00 70.92 C
ATOM 17 C6 G B 12 1.743 18.050 110.841 1.00 68.20 C
ATOM 18 O6 G B 12 0.886 17.414 110.228 1.00 66.71 O
ATOM 19 N1 G B 12 1.556 19.403 111.099 1.00 75.37 N
ATOM 20 C2 G B 12 2.454 20.214 111.746 1.00 71.83 C
ATOM 21 N2 G B 12 2.092 21.488 111.890 1.00 77.92 N
ATOM 22 N3 G B 12 3.618 19.800 112.214 1.00 72.62 N
ATOM 23 C4 G B 12 3.811 18.486 111.981 1.00 68.87 C
ATOM 24 P U B 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 25 OP1 U B 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 26 OP2 U B 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 27 O5' U B 13 9.796 21.963 113.521 1.00 66.04 O
TER
ATOM 2 P G A 7 3.111 33.173 124.702 1.00112.13 P
ATOM 3 OP1 G A 7 2.464 34.505 124.809 1.00104.54 O
ATOM 4 OP2 G A 7 2.526 32.009 125.424 1.00 99.53 O
ATOM 5 O5' G A 7 3.230 32.797 123.157 1.00106.54 O
ATOM 6 C5' G A 7 3.935 33.642 122.251 1.00 85.91 C
ATOM 7 C4' G A 7 4.277 32.886 120.987 1.00 95.68 C
ATOM 8 O4' G A 7 5.133 31.761 121.322 1.00 98.52 O
ATOM 9 C3' G A 7 3.114 32.263 120.226 1.00 88.61 C
ATOM 10 O3' G A 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 11 C2' G A 7 3.810 31.153 119.444 1.00 87.51 C
ATOM 12 O2' G A 7 4.484 31.635 118.295 1.00 60.82 O
ATOM 13 C1' G A 7 4.854 30.675 120.456 1.00 84.55 C
ATOM 14 N9 G A 7 4.459 29.531 121.274 1.00 85.97 N
ATOM 15 C8 G A 7 4.028 29.555 122.580 1.00 88.27 C
ATOM 16 N7 G A 7 3.787 28.366 123.063 1.00 82.87 N
ATOM 17 C5 G A 7 4.065 27.504 122.010 1.00 82.09 C
ATOM 18 C6 G A 7 3.990 26.086 121.936 1.00 81.78 C
ATOM 19 O6 G A 7 3.654 25.281 122.817 1.00 84.68 O
ATOM 20 N1 G A 7 4.360 25.622 120.679 1.00 75.69 N
ATOM 21 C2 G A 7 4.754 26.411 119.630 1.00 82.02 C
ATOM 22 N2 G A 7 5.075 25.770 118.499 1.00 85.23 N
ATOM 23 N3 G A 7 4.828 27.732 119.684 1.00 83.68 N
ATOM 24 C4 G A 7 4.473 28.207 120.895 1.00 82.96 C
ATOM 25 P A A 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 26 OP1 A A 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 27 OP2 A A 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 28 O5' A A 8 1.520 32.704 117.119 1.00 82.36 O
TER
ATOM 1 P G B 12 5.725 21.557 117.771 1.00 65.22 P
ATOM 2 OP1 G B 12 6.793 21.393 118.787 1.00 77.62 O
ATOM 3 OP2 G B 12 5.095 22.882 117.574 1.00 88.29 O
ATOM 4 O5' G B 12 6.314 21.112 116.362 1.00 81.59 O
ATOM 5 C5' G B 12 5.703 20.055 115.635 1.00 62.73 C
ATOM 6 C4' G B 12 6.748 19.210 114.949 1.00 53.79 C
ATOM 7 O4' G B 12 6.093 18.092 114.314 1.00 68.29 O
ATOM 8 C3' G B 12 7.445 19.992 113.843 1.00 43.93 C
ATOM 9 O3' G B 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 10 C2' G B 12 6.703 19.621 112.562 1.00 39.70 C
ATOM 11 O2' G B 12 7.587 19.470 111.471 1.00 47.76 O
ATOM 12 C1' G B 12 6.159 18.238 112.922 1.00 54.80 C
ATOM 13 N9 G B 12 4.925 17.760 112.314 1.00 61.01 N
ATOM 14 C8 G B 12 4.684 16.473 111.909 1.00 66.53 C
ATOM 15 N7 G B 12 3.535 16.328 111.314 1.00 75.29 N
ATOM 16 C5 G B 12 2.973 17.593 111.346 1.00 70.92 C
ATOM 17 C6 G B 12 1.743 18.050 110.841 1.00 68.20 C
ATOM 18 O6 G B 12 0.886 17.414 110.228 1.00 66.71 O
ATOM 19 N1 G B 12 1.556 19.403 111.099 1.00 75.37 N
ATOM 20 C2 G B 12 2.454 20.214 111.746 1.00 71.83 C
ATOM 21 N2 G B 12 2.092 21.488 111.890 1.00 77.92 N
ATOM 22 N3 G B 12 3.618 19.800 112.214 1.00 72.62 N
ATOM 23 C4 G B 12 3.811 18.486 111.981 1.00 68.87 C
ATOM 24 P U B 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 25 OP1 U B 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 26 OP2 U B 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 27 O5' U B 13 9.796 21.963 113.521 1.00 66.04 O
TER
Atoms:
OP1: (2.464,34.505,124.809)
OP2: (2.526,32.009,125.424)
C3': (3.114,32.263,120.226)
C1': (4.854,30.675,120.456)
C5': (3.935,33.642,122.251)
O6: (3.654,25.281,122.817)
O4': (5.133,31.761,121.322)
C8: (4.028,29.555,122.580)
C2: (4.754,26.411,119.630)
C6: (3.990,26.086,121.936)
C5: (4.065,27.504,122.010)
C4: (4.473,28.207,120.895)
P: (3.111,33.173,124.702)
C4': (4.277,32.886,120.987)
C2': (3.810,31.153,119.444)
O2': (4.484,31.635,118.295)
N1: (4.360,25.622,120.679)
N2: (5.075,25.770,118.499)
N3: (4.828,27.732,119.684)
N7: (3.787,28.366,123.063)
N9: (4.459,29.531,121.274)
O5': (3.230,32.797,123.157)
O3': (2.516,33.229,119.360)
OP2: (2.526,32.009,125.424)
C3': (3.114,32.263,120.226)
C1': (4.854,30.675,120.456)
C5': (3.935,33.642,122.251)
O6: (3.654,25.281,122.817)
O4': (5.133,31.761,121.322)
C8: (4.028,29.555,122.580)
C2: (4.754,26.411,119.630)
C6: (3.990,26.086,121.936)
C5: (4.065,27.504,122.010)
C4: (4.473,28.207,120.895)
P: (3.111,33.173,124.702)
C4': (4.277,32.886,120.987)
C2': (3.810,31.153,119.444)
O2': (4.484,31.635,118.295)
N1: (4.360,25.622,120.679)
N2: (5.075,25.770,118.499)
N3: (4.828,27.732,119.684)
N7: (3.787,28.366,123.063)
N9: (4.459,29.531,121.274)
O5': (3.230,32.797,123.157)
O3': (2.516,33.229,119.360)
OP1: (6.793,21.393,118.787)
OP2: (5.095,22.882,117.574)
C3': (7.445,19.992,113.843)
C1': (6.159,18.238,112.922)
C5': (5.703,20.055,115.635)
O6: (0.886,17.414,110.228)
O4': (6.093,18.092,114.314)
C8: (4.684,16.473,111.909)
C2: (2.454,20.214,111.746)
C6: (1.743,18.050,110.841)
C5: (2.973,17.593,111.346)
C4: (3.811,18.486,111.981)
P: (5.725,21.557,117.771)
C4': (6.748,19.210,114.949)
C2': (6.703,19.621,112.562)
O2': (7.587,19.470,111.471)
N1: (1.556,19.403,111.099)
N2: (2.092,21.488,111.890)
N3: (3.618,19.800,112.214)
N7: (3.535,16.328,111.314)
N9: (4.925,17.760,112.314)
O5': (6.314,21.112,116.362)
O3': (8.834,19.669,113.787)
OP2: (5.095,22.882,117.574)
C3': (7.445,19.992,113.843)
C1': (6.159,18.238,112.922)
C5': (5.703,20.055,115.635)
O6: (0.886,17.414,110.228)
O4': (6.093,18.092,114.314)
C8: (4.684,16.473,111.909)
C2: (2.454,20.214,111.746)
C6: (1.743,18.050,110.841)
C5: (2.973,17.593,111.346)
C4: (3.811,18.486,111.981)
P: (5.725,21.557,117.771)
C4': (6.748,19.210,114.949)
C2': (6.703,19.621,112.562)
O2': (7.587,19.470,111.471)
N1: (1.556,19.403,111.099)
N2: (2.092,21.488,111.890)
N3: (3.618,19.800,112.214)
N7: (3.535,16.328,111.314)
N9: (4.925,17.760,112.314)
O5': (6.314,21.112,116.362)
O3': (8.834,19.669,113.787)
Image (generated by PyMOL):