ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01278:0506

Extra

PDB:
ATOM 1 O3' A A1277 19.659 129.563 61.737 1.00 41.60 O
ATOM 2 P G A1278 19.502 129.487 63.329 1.00 43.20 P
ATOM 3 OP1 G A1278 20.040 128.172 63.742 1.00 44.70 O
ATOM 4 OP2 G A1278 18.114 129.855 63.699 1.00 43.59 O
ATOM 5 O5' G A1278 20.459 130.646 63.860 1.00 44.53 O
ATOM 6 C5' G A1278 21.868 130.660 63.547 1.00 42.51 C
ATOM 7 C4' G A1278 22.460 132.001 63.903 1.00 43.62 C
ATOM 8 O4' G A1278 21.805 133.034 63.116 1.00 45.40 O
ATOM 9 C3' G A1278 22.222 132.438 65.337 1.00 43.36 C
ATOM 10 O3' G A1278 23.142 131.851 66.244 1.00 41.39 O
ATOM 11 C2' G A1278 22.340 133.951 65.238 1.00 43.88 C
ATOM 12 O2' G A1278 23.672 134.400 65.177 1.00 46.39 O
ATOM 13 C1' G A1278 21.653 134.213 63.897 1.00 44.18 C
ATOM 14 N9 G A1278 20.226 134.483 64.065 1.00 43.72 N
ATOM 15 C8 G A1278 19.195 133.584 63.937 1.00 42.86 C
ATOM 16 N7 G A1278 18.028 134.103 64.208 1.00 43.92 N
ATOM 17 C5 G A1278 18.299 135.430 64.519 1.00 42.53 C
ATOM 18 C6 G A1278 17.422 136.486 64.890 1.00 41.50 C
ATOM 19 O6 G A1278 16.188 136.463 65.000 1.00 42.35 O
ATOM 20 N1 G A1278 18.114 137.666 65.126 1.00 39.53 N
ATOM 21 C2 G A1278 19.470 137.827 64.994 1.00 41.69 C
ATOM 22 N2 G A1278 19.949 139.067 65.244 1.00 39.34 N
ATOM 23 N3 G A1278 20.298 136.854 64.639 1.00 42.36 N
ATOM 24 C4 G A1278 19.648 135.688 64.422 1.00 42.91 C
ATOM 25 P U A1279 22.633 131.385 67.699 1.00 42.26 P
ATOM 26 OP1 U A1279 23.775 130.702 68.346 1.00 44.39 O
ATOM 27 OP2 U A1279 21.333 130.669 67.573 1.00 39.46 O
ATOM 28 O5' U A1279 22.394 132.752 68.473 1.00 38.14 O
TER

ATOM 1 O3' U B 505 21.221 141.806 64.979 1.00 37.74 O
ATOM 2 P G B 506 20.946 142.496 66.400 1.00 41.96 P
ATOM 3 OP1 G B 506 19.819 141.725 66.997 1.00 39.05 O
ATOM 4 OP2 G B 506 20.830 143.972 66.239 1.00 38.95 O
ATOM 5 O5' G B 506 22.263 142.195 67.243 1.00 40.60 O
ATOM 6 C5' G B 506 22.731 140.853 67.392 1.00 40.89 C
ATOM 7 C4' G B 506 24.146 140.849 67.890 1.00 40.82 C
ATOM 8 O4' G B 506 25.012 141.460 66.885 1.00 41.05 O
ATOM 9 C3' G B 506 24.379 141.641 69.180 1.00 40.65 C
ATOM 10 O3' G B 506 25.230 140.901 70.043 1.00 40.51 O
ATOM 11 C2' G B 506 25.127 142.873 68.689 1.00 39.82 C
ATOM 12 O2' G B 506 25.998 143.449 69.638 1.00 40.10 O
ATOM 13 C1' G B 506 25.938 142.270 67.553 1.00 40.42 C
ATOM 14 N9 G B 506 26.513 143.265 66.658 1.00 39.52 N
ATOM 15 C8 G B 506 25.962 144.459 66.254 1.00 38.27 C
ATOM 16 N7 G B 506 26.809 145.221 65.618 1.00 39.33 N
ATOM 17 C5 G B 506 27.971 144.464 65.561 1.00 41.32 C
ATOM 18 C6 G B 506 29.246 144.773 65.026 1.00 41.98 C
ATOM 19 O6 G B 506 29.620 145.820 64.487 1.00 43.85 O
ATOM 20 N1 G B 506 30.135 143.713 65.180 1.00 41.07 N
ATOM 21 C2 G B 506 29.837 142.513 65.775 1.00 41.13 C
ATOM 22 N2 G B 506 30.828 141.611 65.830 1.00 41.95 N
ATOM 23 N3 G B 506 28.656 142.217 66.281 1.00 40.17 N
ATOM 24 C4 G B 506 27.781 143.232 66.149 1.00 40.39 C
ATOM 25 P A B 507 25.009 140.972 71.631 1.00 41.85 P
ATOM 26 OP1 A B 507 23.584 141.266 71.929 1.00 40.92 O
ATOM 27 OP2 A B 507 26.060 141.870 72.173 1.00 40.86 O
ATOM 28 O5' A B 507 25.314 139.479 72.094 1.00 41.46 O
TER

Atoms:
OP1: (20.040,128.172,63.742)
OP2: (18.114,129.855,63.699)
C3': (22.222,132.438,65.337)
C1': (21.653,134.213,63.897)
C5': (21.868,130.660,63.547)
O6: (16.188,136.463,65.000)
O4': (21.805,133.034,63.116)
C8: (19.195,133.584,63.937)
C2: (19.470,137.827,64.994)
C6: (17.422,136.486,64.890)
C5: (18.299,135.430,64.519)
C4: (19.648,135.688,64.422)
P: (19.502,129.487,63.329)
C4': (22.460,132.001,63.903)
C2': (22.340,133.951,65.238)
O2': (23.672,134.400,65.177)
N1: (18.114,137.666,65.126)
N2: (19.949,139.067,65.244)
N3: (20.298,136.854,64.639)
N7: (18.028,134.103,64.208)
N9: (20.226,134.483,64.065)
O5': (20.459,130.646,63.860)
O3': (23.142,131.851,66.244)
OP1: (19.819,141.725,66.997)
OP2: (20.830,143.972,66.239)
C3': (24.379,141.641,69.180)
C1': (25.938,142.270,67.553)
C5': (22.731,140.853,67.392)
O6: (29.620,145.820,64.487)
O4': (25.012,141.460,66.885)
C8: (25.962,144.459,66.254)
C2: (29.837,142.513,65.775)
C6: (29.246,144.773,65.026)
C5: (27.971,144.464,65.561)
C4: (27.781,143.232,66.149)
P: (20.946,142.496,66.400)
C4': (24.146,140.849,67.890)
C2': (25.127,142.873,68.689)
O2': (25.998,143.449,69.638)
N1: (30.135,143.713,65.180)
N2: (30.828,141.611,65.830)
N3: (28.656,142.217,66.281)
N7: (26.809,145.221,65.618)
N9: (26.513,143.265,66.658)
O5': (22.263,142.195,67.243)
O3': (25.230,140.901,70.043)
Image (generated by PyMOL):
PyMOL image
show in jmol