Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B38:B42
Extra
PDB:
ATOM 1 O3' A A 37 85.642 25.353 87.472 1.00 81.76 O
ATOM 2 P U A 38 87.148 25.840 87.165 1.00 83.29 P
ATOM 3 OP1 U A 38 87.060 27.116 86.401 1.00 82.75 O
ATOM 4 OP2 U A 38 87.957 24.716 86.613 1.00 83.17 O
ATOM 5 O5' U A 38 87.688 26.193 88.621 1.00 83.63 O
ATOM 6 C5' U A 38 86.847 26.920 89.530 1.00 86.07 C
ATOM 7 C4' U A 38 87.082 26.477 90.945 1.00 87.43 C
ATOM 8 O4' U A 38 86.934 25.042 91.043 1.00 88.19 O
ATOM 9 C3' U A 38 88.448 26.792 91.521 1.00 88.44 C
ATOM 10 O3' U A 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 11 C2' U A 38 88.571 25.744 92.638 1.00 89.59 C
ATOM 12 O2' U A 38 87.924 26.125 93.837 1.00 91.73 O
ATOM 13 C1' U A 38 87.767 24.558 92.073 1.00 88.89 C
ATOM 14 N1 U A 38 88.439 23.327 91.605 1.00 88.50 N
ATOM 15 C2 U A 38 88.800 22.367 92.551 1.00 88.23 C
ATOM 16 O2 U A 38 88.657 22.527 93.756 1.00 89.07 O
ATOM 17 N3 U A 38 89.335 21.210 92.033 1.00 87.18 N
ATOM 18 C4 U A 38 89.548 20.911 90.708 1.00 86.71 C
ATOM 19 O4 U A 38 89.921 19.780 90.403 1.00 85.97 O
ATOM 20 C5 U A 38 89.193 21.955 89.795 1.00 86.94 C
ATOM 21 C6 U A 38 88.671 23.102 90.260 1.00 87.83 C
ATOM 22 P C A 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 23 OP1 C A 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 24 OP2 C A 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 25 O5' C A 39 90.726 28.950 92.001 1.00 88.43 O
TER
ATOM 1 O3' C B 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 2 P G B 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 3 OP1 G B 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 4 OP2 G B 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 5 O5' G B 42 87.881 18.654 94.717 1.00 87.53 O
ATOM 6 C5' G B 42 86.857 18.184 93.868 1.00 85.27 C
ATOM 7 C4' G B 42 85.562 18.149 94.618 1.00 84.06 C
ATOM 8 O4' G B 42 84.511 17.708 93.745 1.00 83.87 O
ATOM 9 C3' G B 42 85.482 17.181 95.777 1.00 83.56 C
ATOM 10 O3' G B 42 84.410 17.620 96.583 1.00 82.74 O
ATOM 11 C2' G B 42 85.158 15.860 95.091 1.00 84.26 C
ATOM 12 O2' G B 42 84.419 14.980 95.916 1.00 83.92 O
ATOM 13 C1' G B 42 84.304 16.323 93.914 1.00 84.63 C
ATOM 14 N9 G B 42 84.641 15.703 92.640 1.00 85.64 N
ATOM 15 C8 G B 42 85.360 14.552 92.391 1.00 86.29 C
ATOM 16 N7 G B 42 85.409 14.248 91.122 1.00 86.10 N
ATOM 17 C5 G B 42 84.687 15.262 90.504 1.00 85.65 C
ATOM 18 C6 G B 42 84.355 15.457 89.144 1.00 85.21 C
ATOM 19 O6 G B 42 84.610 14.732 88.182 1.00 84.69 O
ATOM 20 N1 G B 42 83.625 16.628 88.958 1.00 85.11 N
ATOM 21 C2 G B 42 83.249 17.492 89.957 1.00 84.87 C
ATOM 22 N2 G B 42 82.546 18.566 89.590 1.00 85.36 N
ATOM 23 N3 G B 42 83.535 17.313 91.226 1.00 85.25 N
ATOM 24 C4 G B 42 84.244 16.182 91.427 1.00 85.88 C
ATOM 25 P A B 43 84.376 17.223 98.123 1.00 82.50 P
ATOM 26 OP1 A B 43 85.764 16.864 98.527 1.00 82.76 O
ATOM 27 OP2 A B 43 83.282 16.242 98.301 1.00 82.31 O
ATOM 28 O5' A B 43 83.982 18.581 98.846 1.00 82.66 O
TER
ATOM 2 P U A 38 87.148 25.840 87.165 1.00 83.29 P
ATOM 3 OP1 U A 38 87.060 27.116 86.401 1.00 82.75 O
ATOM 4 OP2 U A 38 87.957 24.716 86.613 1.00 83.17 O
ATOM 5 O5' U A 38 87.688 26.193 88.621 1.00 83.63 O
ATOM 6 C5' U A 38 86.847 26.920 89.530 1.00 86.07 C
ATOM 7 C4' U A 38 87.082 26.477 90.945 1.00 87.43 C
ATOM 8 O4' U A 38 86.934 25.042 91.043 1.00 88.19 O
ATOM 9 C3' U A 38 88.448 26.792 91.521 1.00 88.44 C
ATOM 10 O3' U A 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 11 C2' U A 38 88.571 25.744 92.638 1.00 89.59 C
ATOM 12 O2' U A 38 87.924 26.125 93.837 1.00 91.73 O
ATOM 13 C1' U A 38 87.767 24.558 92.073 1.00 88.89 C
ATOM 14 N1 U A 38 88.439 23.327 91.605 1.00 88.50 N
ATOM 15 C2 U A 38 88.800 22.367 92.551 1.00 88.23 C
ATOM 16 O2 U A 38 88.657 22.527 93.756 1.00 89.07 O
ATOM 17 N3 U A 38 89.335 21.210 92.033 1.00 87.18 N
ATOM 18 C4 U A 38 89.548 20.911 90.708 1.00 86.71 C
ATOM 19 O4 U A 38 89.921 19.780 90.403 1.00 85.97 O
ATOM 20 C5 U A 38 89.193 21.955 89.795 1.00 86.94 C
ATOM 21 C6 U A 38 88.671 23.102 90.260 1.00 87.83 C
ATOM 22 P C A 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 23 OP1 C A 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 24 OP2 C A 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 25 O5' C A 39 90.726 28.950 92.001 1.00 88.43 O
TER
ATOM 1 O3' C B 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 2 P G B 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 3 OP1 G B 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 4 OP2 G B 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 5 O5' G B 42 87.881 18.654 94.717 1.00 87.53 O
ATOM 6 C5' G B 42 86.857 18.184 93.868 1.00 85.27 C
ATOM 7 C4' G B 42 85.562 18.149 94.618 1.00 84.06 C
ATOM 8 O4' G B 42 84.511 17.708 93.745 1.00 83.87 O
ATOM 9 C3' G B 42 85.482 17.181 95.777 1.00 83.56 C
ATOM 10 O3' G B 42 84.410 17.620 96.583 1.00 82.74 O
ATOM 11 C2' G B 42 85.158 15.860 95.091 1.00 84.26 C
ATOM 12 O2' G B 42 84.419 14.980 95.916 1.00 83.92 O
ATOM 13 C1' G B 42 84.304 16.323 93.914 1.00 84.63 C
ATOM 14 N9 G B 42 84.641 15.703 92.640 1.00 85.64 N
ATOM 15 C8 G B 42 85.360 14.552 92.391 1.00 86.29 C
ATOM 16 N7 G B 42 85.409 14.248 91.122 1.00 86.10 N
ATOM 17 C5 G B 42 84.687 15.262 90.504 1.00 85.65 C
ATOM 18 C6 G B 42 84.355 15.457 89.144 1.00 85.21 C
ATOM 19 O6 G B 42 84.610 14.732 88.182 1.00 84.69 O
ATOM 20 N1 G B 42 83.625 16.628 88.958 1.00 85.11 N
ATOM 21 C2 G B 42 83.249 17.492 89.957 1.00 84.87 C
ATOM 22 N2 G B 42 82.546 18.566 89.590 1.00 85.36 N
ATOM 23 N3 G B 42 83.535 17.313 91.226 1.00 85.25 N
ATOM 24 C4 G B 42 84.244 16.182 91.427 1.00 85.88 C
ATOM 25 P A B 43 84.376 17.223 98.123 1.00 82.50 P
ATOM 26 OP1 A B 43 85.764 16.864 98.527 1.00 82.76 O
ATOM 27 OP2 A B 43 83.282 16.242 98.301 1.00 82.31 O
ATOM 28 O5' A B 43 83.982 18.581 98.846 1.00 82.66 O
TER
Atoms:
C4: (89.548,20.911,90.708)
N3: (89.335,21.210,92.033)
OP1: (87.060,27.116,86.401)
OP2: (87.957,24.716,86.613)
C2: (88.800,22.367,92.551)
C1': (87.767,24.558,92.073)
C3': (88.448,26.792,91.521)
O5': (87.688,26.193,88.621)
O4': (86.934,25.042,91.043)
C5': (86.847,26.920,89.530)
P: (87.148,25.840,87.165)
C4': (87.082,26.477,90.945)
C2': (88.571,25.744,92.638)
O2': (87.924,26.125,93.837)
N1: (88.439,23.327,91.605)
O4: (89.921,19.780,90.403)
O2: (88.657,22.527,93.756)
C6: (88.671,23.102,90.260)
C5: (89.193,21.955,89.795)
O3': (88.315,28.167,91.939)
N3: (89.335,21.210,92.033)
OP1: (87.060,27.116,86.401)
OP2: (87.957,24.716,86.613)
C2: (88.800,22.367,92.551)
C1': (87.767,24.558,92.073)
C3': (88.448,26.792,91.521)
O5': (87.688,26.193,88.621)
O4': (86.934,25.042,91.043)
C5': (86.847,26.920,89.530)
P: (87.148,25.840,87.165)
C4': (87.082,26.477,90.945)
C2': (88.571,25.744,92.638)
O2': (87.924,26.125,93.837)
N1: (88.439,23.327,91.605)
O4: (89.921,19.780,90.403)
O2: (88.657,22.527,93.756)
C6: (88.671,23.102,90.260)
C5: (89.193,21.955,89.795)
O3': (88.315,28.167,91.939)
OP1: (89.213,16.598,94.679)
OP2: (89.993,18.672,93.382)
C3': (85.482,17.181,95.777)
C1': (84.304,16.323,93.914)
C5': (86.857,18.184,93.868)
O6: (84.610,14.732,88.182)
O4': (84.511,17.708,93.745)
C8: (85.360,14.552,92.391)
C2: (83.249,17.492,89.957)
C6: (84.355,15.457,89.144)
C5: (84.687,15.262,90.504)
C4: (84.244,16.182,91.427)
P: (89.346,18.071,94.584)
C4': (85.562,18.149,94.618)
C2': (85.158,15.860,95.091)
O2': (84.419,14.980,95.916)
N1: (83.625,16.628,88.958)
N2: (82.546,18.566,89.590)
N3: (83.535,17.313,91.226)
N7: (85.409,14.248,91.122)
N9: (84.641,15.703,92.640)
O5': (87.881,18.654,94.717)
O3': (84.410,17.620,96.583)
OP2: (89.993,18.672,93.382)
C3': (85.482,17.181,95.777)
C1': (84.304,16.323,93.914)
C5': (86.857,18.184,93.868)
O6: (84.610,14.732,88.182)
O4': (84.511,17.708,93.745)
C8: (85.360,14.552,92.391)
C2: (83.249,17.492,89.957)
C6: (84.355,15.457,89.144)
C5: (84.687,15.262,90.504)
C4: (84.244,16.182,91.427)
P: (89.346,18.071,94.584)
C4': (85.562,18.149,94.618)
C2': (85.158,15.860,95.091)
O2': (84.419,14.980,95.916)
N1: (83.625,16.628,88.958)
N2: (82.546,18.566,89.590)
N3: (83.535,17.313,91.226)
N7: (85.409,14.248,91.122)
N9: (84.641,15.703,92.640)
O5': (87.881,18.654,94.717)
O3': (84.410,17.620,96.583)
Image (generated by PyMOL):