Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 18.936 128.170 61.624 1.00 35.86 O
ATOM 2 P G A1278 18.830 128.144 63.231 1.00 36.10 P
ATOM 3 OP1 G A1278 19.445 126.867 63.682 1.00 34.23 O
ATOM 4 OP2 G A1278 17.449 128.486 63.651 1.00 34.98 O
ATOM 5 O5' G A1278 19.768 129.344 63.691 1.00 35.52 O
ATOM 6 C5' G A1278 21.163 129.355 63.363 1.00 33.88 C
ATOM 7 C4' G A1278 21.765 130.680 63.749 1.00 35.07 C
ATOM 8 O4' G A1278 21.133 131.741 62.981 1.00 36.55 O
ATOM 9 C3' G A1278 21.526 131.100 65.186 1.00 34.45 C
ATOM 10 O3' G A1278 22.454 130.478 66.060 1.00 35.77 O
ATOM 11 C2' G A1278 21.731 132.604 65.103 1.00 35.19 C
ATOM 12 O2' G A1278 23.111 132.917 65.017 1.00 35.98 O
ATOM 13 C1' G A1278 21.047 132.922 63.769 1.00 34.12 C
ATOM 14 N9 G A1278 19.635 133.253 63.925 1.00 32.13 N
ATOM 15 C8 G A1278 18.584 132.390 63.769 1.00 34.01 C
ATOM 16 N7 G A1278 17.427 132.933 64.035 1.00 34.26 N
ATOM 17 C5 G A1278 17.729 134.239 64.375 1.00 32.24 C
ATOM 18 C6 G A1278 16.879 135.285 64.784 1.00 32.72 C
ATOM 19 O6 G A1278 15.650 135.257 64.945 1.00 31.89 O
ATOM 20 N1 G A1278 17.589 136.457 65.030 1.00 31.76 N
ATOM 21 C2 G A1278 18.943 136.598 64.905 1.00 31.70 C
ATOM 22 N2 G A1278 19.434 137.824 65.184 1.00 32.78 N
ATOM 23 N3 G A1278 19.757 135.615 64.534 1.00 33.05 N
ATOM 24 C4 G A1278 19.084 134.468 64.290 1.00 32.66 C
ATOM 25 P U A1279 21.992 130.043 67.540 1.00 36.45 P
ATOM 26 OP1 U A1279 23.178 129.381 68.145 1.00 37.15 O
ATOM 27 OP2 U A1279 20.687 129.316 67.463 1.00 35.17 O
ATOM 28 O5' U A1279 21.776 131.422 68.303 1.00 35.34 O
TER
ATOM 1 O3' U B 505 20.685 140.520 64.996 1.00 35.28 O
ATOM 2 P G B 506 20.371 141.305 66.368 1.00 37.30 P
ATOM 3 OP1 G B 506 19.146 140.688 66.957 1.00 35.43 O
ATOM 4 OP2 G B 506 20.414 142.770 66.149 1.00 37.71 O
ATOM 5 O5' G B 506 21.614 140.954 67.296 1.00 39.84 O
ATOM 6 C5' G B 506 22.011 139.589 67.506 1.00 36.61 C
ATOM 7 C4' G B 506 23.425 139.539 68.011 1.00 34.59 C
ATOM 8 O4' G B 506 24.304 140.098 66.986 1.00 34.07 O
ATOM 9 C3' G B 506 23.693 140.365 69.275 1.00 34.60 C
ATOM 10 O3' G B 506 24.616 139.648 70.091 1.00 35.84 O
ATOM 11 C2' G B 506 24.411 141.583 68.707 1.00 35.70 C
ATOM 12 O2' G B 506 25.254 142.264 69.614 1.00 37.36 O
ATOM 13 C1' G B 506 25.247 140.912 67.627 1.00 34.88 C
ATOM 14 N9 G B 506 25.879 141.841 66.695 1.00 34.36 N
ATOM 15 C8 G B 506 25.399 143.061 66.276 1.00 31.79 C
ATOM 16 N7 G B 506 26.285 143.761 65.626 1.00 32.67 N
ATOM 17 C5 G B 506 27.403 142.938 65.573 1.00 32.63 C
ATOM 18 C6 G B 506 28.705 143.183 65.055 1.00 33.22 C
ATOM 19 O6 G B 506 29.156 144.228 64.561 1.00 33.50 O
ATOM 20 N1 G B 506 29.529 142.068 65.188 1.00 29.94 N
ATOM 21 C2 G B 506 29.162 140.883 65.766 1.00 31.03 C
ATOM 22 N2 G B 506 30.103 139.924 65.788 1.00 32.16 N
ATOM 23 N3 G B 506 27.961 140.651 66.287 1.00 33.18 N
ATOM 24 C4 G B 506 27.142 141.720 66.163 1.00 33.42 C
ATOM 25 P A B 507 24.493 139.692 71.700 1.00 35.96 P
ATOM 26 OP1 A B 507 23.108 140.055 72.087 1.00 34.13 O
ATOM 27 OP2 A B 507 25.635 140.489 72.235 1.00 37.67 O
ATOM 28 O5' A B 507 24.783 138.179 72.109 1.00 35.56 O
TER
ATOM 2 P G A1278 18.830 128.144 63.231 1.00 36.10 P
ATOM 3 OP1 G A1278 19.445 126.867 63.682 1.00 34.23 O
ATOM 4 OP2 G A1278 17.449 128.486 63.651 1.00 34.98 O
ATOM 5 O5' G A1278 19.768 129.344 63.691 1.00 35.52 O
ATOM 6 C5' G A1278 21.163 129.355 63.363 1.00 33.88 C
ATOM 7 C4' G A1278 21.765 130.680 63.749 1.00 35.07 C
ATOM 8 O4' G A1278 21.133 131.741 62.981 1.00 36.55 O
ATOM 9 C3' G A1278 21.526 131.100 65.186 1.00 34.45 C
ATOM 10 O3' G A1278 22.454 130.478 66.060 1.00 35.77 O
ATOM 11 C2' G A1278 21.731 132.604 65.103 1.00 35.19 C
ATOM 12 O2' G A1278 23.111 132.917 65.017 1.00 35.98 O
ATOM 13 C1' G A1278 21.047 132.922 63.769 1.00 34.12 C
ATOM 14 N9 G A1278 19.635 133.253 63.925 1.00 32.13 N
ATOM 15 C8 G A1278 18.584 132.390 63.769 1.00 34.01 C
ATOM 16 N7 G A1278 17.427 132.933 64.035 1.00 34.26 N
ATOM 17 C5 G A1278 17.729 134.239 64.375 1.00 32.24 C
ATOM 18 C6 G A1278 16.879 135.285 64.784 1.00 32.72 C
ATOM 19 O6 G A1278 15.650 135.257 64.945 1.00 31.89 O
ATOM 20 N1 G A1278 17.589 136.457 65.030 1.00 31.76 N
ATOM 21 C2 G A1278 18.943 136.598 64.905 1.00 31.70 C
ATOM 22 N2 G A1278 19.434 137.824 65.184 1.00 32.78 N
ATOM 23 N3 G A1278 19.757 135.615 64.534 1.00 33.05 N
ATOM 24 C4 G A1278 19.084 134.468 64.290 1.00 32.66 C
ATOM 25 P U A1279 21.992 130.043 67.540 1.00 36.45 P
ATOM 26 OP1 U A1279 23.178 129.381 68.145 1.00 37.15 O
ATOM 27 OP2 U A1279 20.687 129.316 67.463 1.00 35.17 O
ATOM 28 O5' U A1279 21.776 131.422 68.303 1.00 35.34 O
TER
ATOM 1 O3' U B 505 20.685 140.520 64.996 1.00 35.28 O
ATOM 2 P G B 506 20.371 141.305 66.368 1.00 37.30 P
ATOM 3 OP1 G B 506 19.146 140.688 66.957 1.00 35.43 O
ATOM 4 OP2 G B 506 20.414 142.770 66.149 1.00 37.71 O
ATOM 5 O5' G B 506 21.614 140.954 67.296 1.00 39.84 O
ATOM 6 C5' G B 506 22.011 139.589 67.506 1.00 36.61 C
ATOM 7 C4' G B 506 23.425 139.539 68.011 1.00 34.59 C
ATOM 8 O4' G B 506 24.304 140.098 66.986 1.00 34.07 O
ATOM 9 C3' G B 506 23.693 140.365 69.275 1.00 34.60 C
ATOM 10 O3' G B 506 24.616 139.648 70.091 1.00 35.84 O
ATOM 11 C2' G B 506 24.411 141.583 68.707 1.00 35.70 C
ATOM 12 O2' G B 506 25.254 142.264 69.614 1.00 37.36 O
ATOM 13 C1' G B 506 25.247 140.912 67.627 1.00 34.88 C
ATOM 14 N9 G B 506 25.879 141.841 66.695 1.00 34.36 N
ATOM 15 C8 G B 506 25.399 143.061 66.276 1.00 31.79 C
ATOM 16 N7 G B 506 26.285 143.761 65.626 1.00 32.67 N
ATOM 17 C5 G B 506 27.403 142.938 65.573 1.00 32.63 C
ATOM 18 C6 G B 506 28.705 143.183 65.055 1.00 33.22 C
ATOM 19 O6 G B 506 29.156 144.228 64.561 1.00 33.50 O
ATOM 20 N1 G B 506 29.529 142.068 65.188 1.00 29.94 N
ATOM 21 C2 G B 506 29.162 140.883 65.766 1.00 31.03 C
ATOM 22 N2 G B 506 30.103 139.924 65.788 1.00 32.16 N
ATOM 23 N3 G B 506 27.961 140.651 66.287 1.00 33.18 N
ATOM 24 C4 G B 506 27.142 141.720 66.163 1.00 33.42 C
ATOM 25 P A B 507 24.493 139.692 71.700 1.00 35.96 P
ATOM 26 OP1 A B 507 23.108 140.055 72.087 1.00 34.13 O
ATOM 27 OP2 A B 507 25.635 140.489 72.235 1.00 37.67 O
ATOM 28 O5' A B 507 24.783 138.179 72.109 1.00 35.56 O
TER
Atoms:
OP1: (19.445,126.867,63.682)
OP2: (17.449,128.486,63.651)
C3': (21.526,131.100,65.186)
C1': (21.047,132.922,63.769)
C5': (21.163,129.355,63.363)
O6: (15.650,135.257,64.945)
O4': (21.133,131.741,62.981)
C8: (18.584,132.390,63.769)
C2: (18.943,136.598,64.905)
C6: (16.879,135.285,64.784)
C5: (17.729,134.239,64.375)
C4: (19.084,134.468,64.290)
P: (18.830,128.144,63.231)
C4': (21.765,130.680,63.749)
C2': (21.731,132.604,65.103)
O2': (23.111,132.917,65.017)
N1: (17.589,136.457,65.030)
N2: (19.434,137.824,65.184)
N3: (19.757,135.615,64.534)
N7: (17.427,132.933,64.035)
N9: (19.635,133.253,63.925)
O5': (19.768,129.344,63.691)
O3': (22.454,130.478,66.060)
OP2: (17.449,128.486,63.651)
C3': (21.526,131.100,65.186)
C1': (21.047,132.922,63.769)
C5': (21.163,129.355,63.363)
O6: (15.650,135.257,64.945)
O4': (21.133,131.741,62.981)
C8: (18.584,132.390,63.769)
C2: (18.943,136.598,64.905)
C6: (16.879,135.285,64.784)
C5: (17.729,134.239,64.375)
C4: (19.084,134.468,64.290)
P: (18.830,128.144,63.231)
C4': (21.765,130.680,63.749)
C2': (21.731,132.604,65.103)
O2': (23.111,132.917,65.017)
N1: (17.589,136.457,65.030)
N2: (19.434,137.824,65.184)
N3: (19.757,135.615,64.534)
N7: (17.427,132.933,64.035)
N9: (19.635,133.253,63.925)
O5': (19.768,129.344,63.691)
O3': (22.454,130.478,66.060)
OP1: (19.146,140.688,66.957)
OP2: (20.414,142.770,66.149)
C3': (23.693,140.365,69.275)
C1': (25.247,140.912,67.627)
C5': (22.011,139.589,67.506)
O6: (29.156,144.228,64.561)
O4': (24.304,140.098,66.986)
C8: (25.399,143.061,66.276)
C2: (29.162,140.883,65.766)
C6: (28.705,143.183,65.055)
C5: (27.403,142.938,65.573)
C4: (27.142,141.720,66.163)
P: (20.371,141.305,66.368)
C4': (23.425,139.539,68.011)
C2': (24.411,141.583,68.707)
O2': (25.254,142.264,69.614)
N1: (29.529,142.068,65.188)
N2: (30.103,139.924,65.788)
N3: (27.961,140.651,66.287)
N7: (26.285,143.761,65.626)
N9: (25.879,141.841,66.695)
O5': (21.614,140.954,67.296)
O3': (24.616,139.648,70.091)
OP2: (20.414,142.770,66.149)
C3': (23.693,140.365,69.275)
C1': (25.247,140.912,67.627)
C5': (22.011,139.589,67.506)
O6: (29.156,144.228,64.561)
O4': (24.304,140.098,66.986)
C8: (25.399,143.061,66.276)
C2: (29.162,140.883,65.766)
C6: (28.705,143.183,65.055)
C5: (27.403,142.938,65.573)
C4: (27.142,141.720,66.163)
P: (20.371,141.305,66.368)
C4': (23.425,139.539,68.011)
C2': (24.411,141.583,68.707)
O2': (25.254,142.264,69.614)
N1: (29.529,142.068,65.188)
N2: (30.103,139.924,65.788)
N3: (27.961,140.651,66.287)
N7: (26.285,143.761,65.626)
N9: (25.879,141.841,66.695)
O5': (21.614,140.954,67.296)
O3': (24.616,139.648,70.091)
Image (generated by PyMOL):