Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -11.050 95.077 94.283 1.00 46.44 O
ATOM 2 P G A 552 -10.755 93.991 95.420 1.00 47.87 P
ATOM 3 OP1 G A 552 -10.534 92.673 94.770 1.00 46.60 O
ATOM 4 OP2 G A 552 -11.799 94.141 96.469 1.00 47.57 O
ATOM 5 O5' G A 552 -9.389 94.482 96.070 1.00 49.06 O
ATOM 6 C5' G A 552 -8.191 94.602 95.292 1.00 47.08 C
ATOM 7 C4' G A 552 -7.120 95.265 96.115 1.00 46.16 C
ATOM 8 O4' G A 552 -7.572 96.588 96.507 1.00 48.05 O
ATOM 9 C3' G A 552 -6.804 94.585 97.436 1.00 45.85 C
ATOM 10 O3' G A 552 -5.919 93.501 97.207 1.00 46.41 O
ATOM 11 C2' G A 552 -6.190 95.724 98.236 1.00 46.85 C
ATOM 12 O2' G A 552 -4.844 95.980 97.893 1.00 48.89 O
ATOM 13 C1' G A 552 -7.058 96.906 97.790 1.00 47.44 C
ATOM 14 N9 G A 552 -8.180 97.145 98.693 1.00 48.13 N
ATOM 15 C8 G A 552 -9.337 96.406 98.790 1.00 47.83 C
ATOM 16 N7 G A 552 -10.132 96.821 99.739 1.00 49.02 N
ATOM 17 C5 G A 552 -9.470 97.911 100.293 1.00 50.01 C
ATOM 18 C6 G A 552 -9.839 98.765 101.373 1.00 50.30 C
ATOM 19 O6 G A 552 -10.861 98.726 102.075 1.00 51.97 O
ATOM 20 N1 G A 552 -8.875 99.739 101.609 1.00 50.48 N
ATOM 21 C2 G A 552 -7.703 99.877 100.903 1.00 51.27 C
ATOM 22 N2 G A 552 -6.894 100.878 101.294 1.00 50.34 N
ATOM 23 N3 G A 552 -7.348 99.092 99.895 1.00 50.76 N
ATOM 24 C4 G A 552 -8.271 98.135 99.648 1.00 49.03 C
ATOM 25 P A A 553 -5.404 92.592 98.432 1.00 48.25 P
ATOM 26 OP1 A A 553 -5.962 91.230 98.235 1.00 45.85 O
ATOM 27 OP2 A A 553 -5.602 93.294 99.729 1.00 43.95 O
ATOM 28 O5' A A 553 -3.839 92.473 98.142 1.00 48.44 O
TER
ATOM 1 O3' A B 579 -6.585 102.432 106.154 1.00 49.79 O
ATOM 2 P G B 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 3 OP1 G B 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 4 OP2 G B 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 5 O5' G B 580 -5.183 101.979 104.108 1.00 47.99 O
ATOM 6 C5' G B 580 -3.857 102.310 104.578 1.00 44.65 C
ATOM 7 C4' G B 580 -2.853 101.366 103.964 1.00 44.96 C
ATOM 8 O4' G B 580 -3.107 100.018 104.440 1.00 44.36 O
ATOM 9 C3' G B 580 -2.941 101.266 102.450 1.00 45.74 C
ATOM 10 O3' G B 580 -2.118 102.249 101.835 1.00 47.64 O
ATOM 11 C2' G B 580 -2.388 99.874 102.169 1.00 45.23 C
ATOM 12 O2' G B 580 -0.979 99.852 102.106 1.00 48.37 O
ATOM 13 C1' G B 580 -2.878 99.088 103.392 1.00 44.38 C
ATOM 14 N9 G B 580 -4.121 98.368 103.134 1.00 43.62 N
ATOM 15 C8 G B 580 -5.406 98.821 103.343 1.00 43.52 C
ATOM 16 N7 G B 580 -6.317 97.967 102.962 1.00 43.64 N
ATOM 17 C5 G B 580 -5.594 96.883 102.484 1.00 41.76 C
ATOM 18 C6 G B 580 -6.040 95.670 101.929 1.00 40.79 C
ATOM 19 O6 G B 580 -7.203 95.295 101.739 1.00 44.49 O
ATOM 20 N1 G B 580 -4.976 94.848 101.573 1.00 39.95 N
ATOM 21 C2 G B 580 -3.646 95.159 101.736 1.00 41.28 C
ATOM 22 N2 G B 580 -2.755 94.223 101.340 1.00 39.80 N
ATOM 23 N3 G B 580 -3.217 96.298 102.251 1.00 40.58 N
ATOM 24 C4 G B 580 -4.237 97.107 102.599 1.00 41.77 C
ATOM 25 P A B 581 -2.742 103.652 101.354 1.00 49.96 P
ATOM 26 OP1 A B 581 -2.622 104.610 102.491 1.00 46.64 O
ATOM 27 OP2 A B 581 -4.065 103.439 100.716 1.00 48.64 O
ATOM 28 O5' A B 581 -1.724 104.110 100.217 1.00 49.59 O
TER
ATOM 2 P G A 552 -10.755 93.991 95.420 1.00 47.87 P
ATOM 3 OP1 G A 552 -10.534 92.673 94.770 1.00 46.60 O
ATOM 4 OP2 G A 552 -11.799 94.141 96.469 1.00 47.57 O
ATOM 5 O5' G A 552 -9.389 94.482 96.070 1.00 49.06 O
ATOM 6 C5' G A 552 -8.191 94.602 95.292 1.00 47.08 C
ATOM 7 C4' G A 552 -7.120 95.265 96.115 1.00 46.16 C
ATOM 8 O4' G A 552 -7.572 96.588 96.507 1.00 48.05 O
ATOM 9 C3' G A 552 -6.804 94.585 97.436 1.00 45.85 C
ATOM 10 O3' G A 552 -5.919 93.501 97.207 1.00 46.41 O
ATOM 11 C2' G A 552 -6.190 95.724 98.236 1.00 46.85 C
ATOM 12 O2' G A 552 -4.844 95.980 97.893 1.00 48.89 O
ATOM 13 C1' G A 552 -7.058 96.906 97.790 1.00 47.44 C
ATOM 14 N9 G A 552 -8.180 97.145 98.693 1.00 48.13 N
ATOM 15 C8 G A 552 -9.337 96.406 98.790 1.00 47.83 C
ATOM 16 N7 G A 552 -10.132 96.821 99.739 1.00 49.02 N
ATOM 17 C5 G A 552 -9.470 97.911 100.293 1.00 50.01 C
ATOM 18 C6 G A 552 -9.839 98.765 101.373 1.00 50.30 C
ATOM 19 O6 G A 552 -10.861 98.726 102.075 1.00 51.97 O
ATOM 20 N1 G A 552 -8.875 99.739 101.609 1.00 50.48 N
ATOM 21 C2 G A 552 -7.703 99.877 100.903 1.00 51.27 C
ATOM 22 N2 G A 552 -6.894 100.878 101.294 1.00 50.34 N
ATOM 23 N3 G A 552 -7.348 99.092 99.895 1.00 50.76 N
ATOM 24 C4 G A 552 -8.271 98.135 99.648 1.00 49.03 C
ATOM 25 P A A 553 -5.404 92.592 98.432 1.00 48.25 P
ATOM 26 OP1 A A 553 -5.962 91.230 98.235 1.00 45.85 O
ATOM 27 OP2 A A 553 -5.602 93.294 99.729 1.00 43.95 O
ATOM 28 O5' A A 553 -3.839 92.473 98.142 1.00 48.44 O
TER
ATOM 1 O3' A B 579 -6.585 102.432 106.154 1.00 49.79 O
ATOM 2 P G B 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 3 OP1 G B 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 4 OP2 G B 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 5 O5' G B 580 -5.183 101.979 104.108 1.00 47.99 O
ATOM 6 C5' G B 580 -3.857 102.310 104.578 1.00 44.65 C
ATOM 7 C4' G B 580 -2.853 101.366 103.964 1.00 44.96 C
ATOM 8 O4' G B 580 -3.107 100.018 104.440 1.00 44.36 O
ATOM 9 C3' G B 580 -2.941 101.266 102.450 1.00 45.74 C
ATOM 10 O3' G B 580 -2.118 102.249 101.835 1.00 47.64 O
ATOM 11 C2' G B 580 -2.388 99.874 102.169 1.00 45.23 C
ATOM 12 O2' G B 580 -0.979 99.852 102.106 1.00 48.37 O
ATOM 13 C1' G B 580 -2.878 99.088 103.392 1.00 44.38 C
ATOM 14 N9 G B 580 -4.121 98.368 103.134 1.00 43.62 N
ATOM 15 C8 G B 580 -5.406 98.821 103.343 1.00 43.52 C
ATOM 16 N7 G B 580 -6.317 97.967 102.962 1.00 43.64 N
ATOM 17 C5 G B 580 -5.594 96.883 102.484 1.00 41.76 C
ATOM 18 C6 G B 580 -6.040 95.670 101.929 1.00 40.79 C
ATOM 19 O6 G B 580 -7.203 95.295 101.739 1.00 44.49 O
ATOM 20 N1 G B 580 -4.976 94.848 101.573 1.00 39.95 N
ATOM 21 C2 G B 580 -3.646 95.159 101.736 1.00 41.28 C
ATOM 22 N2 G B 580 -2.755 94.223 101.340 1.00 39.80 N
ATOM 23 N3 G B 580 -3.217 96.298 102.251 1.00 40.58 N
ATOM 24 C4 G B 580 -4.237 97.107 102.599 1.00 41.77 C
ATOM 25 P A B 581 -2.742 103.652 101.354 1.00 49.96 P
ATOM 26 OP1 A B 581 -2.622 104.610 102.491 1.00 46.64 O
ATOM 27 OP2 A B 581 -4.065 103.439 100.716 1.00 48.64 O
ATOM 28 O5' A B 581 -1.724 104.110 100.217 1.00 49.59 O
TER
Atoms:
OP1: (-10.534,92.673,94.770)
OP2: (-11.799,94.141,96.469)
C3': (-6.804,94.585,97.436)
C1': (-7.058,96.906,97.790)
C5': (-8.191,94.602,95.292)
O6: (-10.861,98.726,102.075)
O4': (-7.572,96.588,96.507)
C8: (-9.337,96.406,98.790)
C2: (-7.703,99.877,100.903)
C6: (-9.839,98.765,101.373)
C5: (-9.470,97.911,100.293)
C4: (-8.271,98.135,99.648)
P: (-10.755,93.991,95.420)
C4': (-7.120,95.265,96.115)
C2': (-6.190,95.724,98.236)
O2': (-4.844,95.980,97.893)
N1: (-8.875,99.739,101.609)
N2: (-6.894,100.878,101.294)
N3: (-7.348,99.092,99.895)
N7: (-10.132,96.821,99.739)
N9: (-8.180,97.145,98.693)
O5': (-9.389,94.482,96.070)
O3': (-5.919,93.501,97.207)
OP2: (-11.799,94.141,96.469)
C3': (-6.804,94.585,97.436)
C1': (-7.058,96.906,97.790)
C5': (-8.191,94.602,95.292)
O6: (-10.861,98.726,102.075)
O4': (-7.572,96.588,96.507)
C8: (-9.337,96.406,98.790)
C2: (-7.703,99.877,100.903)
C6: (-9.839,98.765,101.373)
C5: (-9.470,97.911,100.293)
C4: (-8.271,98.135,99.648)
P: (-10.755,93.991,95.420)
C4': (-7.120,95.265,96.115)
C2': (-6.190,95.724,98.236)
O2': (-4.844,95.980,97.893)
N1: (-8.875,99.739,101.609)
N2: (-6.894,100.878,101.294)
N3: (-7.348,99.092,99.895)
N7: (-10.132,96.821,99.739)
N9: (-8.180,97.145,98.693)
O5': (-9.389,94.482,96.070)
O3': (-5.919,93.501,97.207)
OP1: (-6.204,104.247,104.505)
OP2: (-7.643,102.207,103.881)
C3': (-2.941,101.266,102.450)
C1': (-2.878,99.088,103.392)
C5': (-3.857,102.310,104.578)
O6: (-7.203,95.295,101.739)
O4': (-3.107,100.018,104.440)
C8: (-5.406,98.821,103.343)
C2: (-3.646,95.159,101.736)
C6: (-6.040,95.670,101.929)
C5: (-5.594,96.883,102.484)
C4: (-4.237,97.107,102.599)
P: (-6.469,102.788,104.592)
C4': (-2.853,101.366,103.964)
C2': (-2.388,99.874,102.169)
O2': (-0.979,99.852,102.106)
N1: (-4.976,94.848,101.573)
N2: (-2.755,94.223,101.340)
N3: (-3.217,96.298,102.251)
N7: (-6.317,97.967,102.962)
N9: (-4.121,98.368,103.134)
O5': (-5.183,101.979,104.108)
O3': (-2.118,102.249,101.835)
OP2: (-7.643,102.207,103.881)
C3': (-2.941,101.266,102.450)
C1': (-2.878,99.088,103.392)
C5': (-3.857,102.310,104.578)
O6: (-7.203,95.295,101.739)
O4': (-3.107,100.018,104.440)
C8: (-5.406,98.821,103.343)
C2: (-3.646,95.159,101.736)
C6: (-6.040,95.670,101.929)
C5: (-5.594,96.883,102.484)
C4: (-4.237,97.107,102.599)
P: (-6.469,102.788,104.592)
C4': (-2.853,101.366,103.964)
C2': (-2.388,99.874,102.169)
O2': (-0.979,99.852,102.106)
N1: (-4.976,94.848,101.573)
N2: (-2.755,94.223,101.340)
N3: (-3.217,96.298,102.251)
N7: (-6.317,97.967,102.962)
N9: (-4.121,98.368,103.134)
O5': (-5.183,101.979,104.108)
O3': (-2.118,102.249,101.835)
Image (generated by PyMOL):