Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 19.015 128.265 61.693 1.00 37.02 O
ATOM 2 P G A1278 18.903 128.193 63.299 1.00 37.00 P
ATOM 3 OP1 G A1278 19.506 126.909 63.723 1.00 35.70 O
ATOM 4 OP2 G A1278 17.532 128.535 63.725 1.00 36.88 O
ATOM 5 O5' G A1278 19.846 129.371 63.792 1.00 38.41 O
ATOM 6 C5' G A1278 21.232 129.403 63.429 1.00 35.94 C
ATOM 7 C4' G A1278 21.826 130.725 63.816 1.00 37.06 C
ATOM 8 O4' G A1278 21.188 131.783 63.052 1.00 36.48 O
ATOM 9 C3' G A1278 21.590 131.134 65.259 1.00 36.22 C
ATOM 10 O3' G A1278 22.518 130.506 66.131 1.00 37.69 O
ATOM 11 C2' G A1278 21.774 132.641 65.187 1.00 35.86 C
ATOM 12 O2' G A1278 23.148 132.977 65.115 1.00 32.95 O
ATOM 13 C1' G A1278 21.088 132.957 63.851 1.00 35.37 C
ATOM 14 N9 G A1278 19.672 133.275 64.004 1.00 33.98 N
ATOM 15 C8 G A1278 18.628 132.404 63.836 1.00 35.48 C
ATOM 16 N7 G A1278 17.466 132.935 64.098 1.00 34.95 N
ATOM 17 C5 G A1278 17.754 134.245 64.445 1.00 33.78 C
ATOM 18 C6 G A1278 16.895 135.288 64.851 1.00 33.08 C
ATOM 19 O6 G A1278 15.668 135.261 64.996 1.00 30.49 O
ATOM 20 N1 G A1278 17.596 136.457 65.113 1.00 32.64 N
ATOM 21 C2 G A1278 18.946 136.607 65.002 1.00 32.37 C
ATOM 22 N2 G A1278 19.417 137.835 65.288 1.00 32.23 N
ATOM 23 N3 G A1278 19.772 135.633 64.636 1.00 34.24 N
ATOM 24 C4 G A1278 19.110 134.483 64.375 1.00 35.17 C
ATOM 25 P U A1279 22.059 130.073 67.615 1.00 37.20 P
ATOM 26 OP1 U A1279 23.255 129.435 68.210 1.00 37.87 O
ATOM 27 OP2 U A1279 20.780 129.315 67.540 1.00 35.82 O
ATOM 28 O5' U A1279 21.825 131.451 68.370 1.00 35.12 O
TER
ATOM 1 O3' U B 505 20.755 140.575 65.051 1.00 37.38 O
ATOM 2 P G B 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 3 OP1 G B 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 4 OP2 G B 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 5 O5' G B 506 21.660 141.002 67.367 1.00 40.46 O
ATOM 6 C5' G B 506 22.079 139.644 67.560 1.00 36.96 C
ATOM 7 C4' G B 506 23.491 139.612 68.079 1.00 36.24 C
ATOM 8 O4' G B 506 24.379 140.185 67.071 1.00 34.62 O
ATOM 9 C3' G B 506 23.739 140.427 69.356 1.00 34.75 C
ATOM 10 O3' G B 506 24.655 139.700 70.177 1.00 35.13 O
ATOM 11 C2' G B 506 24.437 141.666 68.805 1.00 34.52 C
ATOM 12 O2' G B 506 25.250 142.371 69.720 1.00 36.32 O
ATOM 13 C1' G B 506 25.293 141.022 67.725 1.00 34.55 C
ATOM 14 N9 G B 506 25.919 141.957 66.796 1.00 35.47 N
ATOM 15 C8 G B 506 25.420 143.161 66.357 1.00 31.93 C
ATOM 16 N7 G B 506 26.293 143.861 65.687 1.00 34.46 N
ATOM 17 C5 G B 506 27.426 143.060 65.650 1.00 34.21 C
ATOM 18 C6 G B 506 28.722 143.314 65.115 1.00 35.14 C
ATOM 19 O6 G B 506 29.146 144.342 64.574 1.00 35.96 O
ATOM 20 N1 G B 506 29.566 142.221 65.279 1.00 33.86 N
ATOM 21 C2 G B 506 29.217 141.039 65.879 1.00 32.88 C
ATOM 22 N2 G B 506 30.162 140.090 65.900 1.00 32.46 N
ATOM 23 N3 G B 506 28.025 140.802 66.413 1.00 34.91 N
ATOM 24 C4 G B 506 27.189 141.852 66.271 1.00 35.27 C
ATOM 25 P A B 507 24.515 139.734 71.784 1.00 33.49 P
ATOM 26 OP1 A B 507 23.120 140.072 72.154 1.00 31.38 O
ATOM 27 OP2 A B 507 25.631 140.567 72.299 1.00 33.57 O
ATOM 28 O5' A B 507 24.822 138.225 72.205 1.00 34.69 O
TER
ATOM 2 P G A1278 18.903 128.193 63.299 1.00 37.00 P
ATOM 3 OP1 G A1278 19.506 126.909 63.723 1.00 35.70 O
ATOM 4 OP2 G A1278 17.532 128.535 63.725 1.00 36.88 O
ATOM 5 O5' G A1278 19.846 129.371 63.792 1.00 38.41 O
ATOM 6 C5' G A1278 21.232 129.403 63.429 1.00 35.94 C
ATOM 7 C4' G A1278 21.826 130.725 63.816 1.00 37.06 C
ATOM 8 O4' G A1278 21.188 131.783 63.052 1.00 36.48 O
ATOM 9 C3' G A1278 21.590 131.134 65.259 1.00 36.22 C
ATOM 10 O3' G A1278 22.518 130.506 66.131 1.00 37.69 O
ATOM 11 C2' G A1278 21.774 132.641 65.187 1.00 35.86 C
ATOM 12 O2' G A1278 23.148 132.977 65.115 1.00 32.95 O
ATOM 13 C1' G A1278 21.088 132.957 63.851 1.00 35.37 C
ATOM 14 N9 G A1278 19.672 133.275 64.004 1.00 33.98 N
ATOM 15 C8 G A1278 18.628 132.404 63.836 1.00 35.48 C
ATOM 16 N7 G A1278 17.466 132.935 64.098 1.00 34.95 N
ATOM 17 C5 G A1278 17.754 134.245 64.445 1.00 33.78 C
ATOM 18 C6 G A1278 16.895 135.288 64.851 1.00 33.08 C
ATOM 19 O6 G A1278 15.668 135.261 64.996 1.00 30.49 O
ATOM 20 N1 G A1278 17.596 136.457 65.113 1.00 32.64 N
ATOM 21 C2 G A1278 18.946 136.607 65.002 1.00 32.37 C
ATOM 22 N2 G A1278 19.417 137.835 65.288 1.00 32.23 N
ATOM 23 N3 G A1278 19.772 135.633 64.636 1.00 34.24 N
ATOM 24 C4 G A1278 19.110 134.483 64.375 1.00 35.17 C
ATOM 25 P U A1279 22.059 130.073 67.615 1.00 37.20 P
ATOM 26 OP1 U A1279 23.255 129.435 68.210 1.00 37.87 O
ATOM 27 OP2 U A1279 20.780 129.315 67.540 1.00 35.82 O
ATOM 28 O5' U A1279 21.825 131.451 68.370 1.00 35.12 O
TER
ATOM 1 O3' U B 505 20.755 140.575 65.051 1.00 37.38 O
ATOM 2 P G B 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 3 OP1 G B 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 4 OP2 G B 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 5 O5' G B 506 21.660 141.002 67.367 1.00 40.46 O
ATOM 6 C5' G B 506 22.079 139.644 67.560 1.00 36.96 C
ATOM 7 C4' G B 506 23.491 139.612 68.079 1.00 36.24 C
ATOM 8 O4' G B 506 24.379 140.185 67.071 1.00 34.62 O
ATOM 9 C3' G B 506 23.739 140.427 69.356 1.00 34.75 C
ATOM 10 O3' G B 506 24.655 139.700 70.177 1.00 35.13 O
ATOM 11 C2' G B 506 24.437 141.666 68.805 1.00 34.52 C
ATOM 12 O2' G B 506 25.250 142.371 69.720 1.00 36.32 O
ATOM 13 C1' G B 506 25.293 141.022 67.725 1.00 34.55 C
ATOM 14 N9 G B 506 25.919 141.957 66.796 1.00 35.47 N
ATOM 15 C8 G B 506 25.420 143.161 66.357 1.00 31.93 C
ATOM 16 N7 G B 506 26.293 143.861 65.687 1.00 34.46 N
ATOM 17 C5 G B 506 27.426 143.060 65.650 1.00 34.21 C
ATOM 18 C6 G B 506 28.722 143.314 65.115 1.00 35.14 C
ATOM 19 O6 G B 506 29.146 144.342 64.574 1.00 35.96 O
ATOM 20 N1 G B 506 29.566 142.221 65.279 1.00 33.86 N
ATOM 21 C2 G B 506 29.217 141.039 65.879 1.00 32.88 C
ATOM 22 N2 G B 506 30.162 140.090 65.900 1.00 32.46 N
ATOM 23 N3 G B 506 28.025 140.802 66.413 1.00 34.91 N
ATOM 24 C4 G B 506 27.189 141.852 66.271 1.00 35.27 C
ATOM 25 P A B 507 24.515 139.734 71.784 1.00 33.49 P
ATOM 26 OP1 A B 507 23.120 140.072 72.154 1.00 31.38 O
ATOM 27 OP2 A B 507 25.631 140.567 72.299 1.00 33.57 O
ATOM 28 O5' A B 507 24.822 138.225 72.205 1.00 34.69 O
TER
Atoms:
OP1: (19.506,126.909,63.723)
OP2: (17.532,128.535,63.725)
C3': (21.590,131.134,65.259)
C1': (21.088,132.957,63.851)
C5': (21.232,129.403,63.429)
O6: (15.668,135.261,64.996)
O4': (21.188,131.783,63.052)
C8: (18.628,132.404,63.836)
C2: (18.946,136.607,65.002)
C6: (16.895,135.288,64.851)
C5: (17.754,134.245,64.445)
C4: (19.110,134.483,64.375)
P: (18.903,128.193,63.299)
C4': (21.826,130.725,63.816)
C2': (21.774,132.641,65.187)
O2': (23.148,132.977,65.115)
N1: (17.596,136.457,65.113)
N2: (19.417,137.835,65.288)
N3: (19.772,135.633,64.636)
N7: (17.466,132.935,64.098)
N9: (19.672,133.275,64.004)
O5': (19.846,129.371,63.792)
O3': (22.518,130.506,66.131)
OP2: (17.532,128.535,63.725)
C3': (21.590,131.134,65.259)
C1': (21.088,132.957,63.851)
C5': (21.232,129.403,63.429)
O6: (15.668,135.261,64.996)
O4': (21.188,131.783,63.052)
C8: (18.628,132.404,63.836)
C2: (18.946,136.607,65.002)
C6: (16.895,135.288,64.851)
C5: (17.754,134.245,64.445)
C4: (19.110,134.483,64.375)
P: (18.903,128.193,63.299)
C4': (21.826,130.725,63.816)
C2': (21.774,132.641,65.187)
O2': (23.148,132.977,65.115)
N1: (17.596,136.457,65.113)
N2: (19.417,137.835,65.288)
N3: (19.772,135.633,64.636)
N7: (17.466,132.935,64.098)
N9: (19.672,133.275,64.004)
O5': (19.846,129.371,63.792)
O3': (22.518,130.506,66.131)
OP1: (19.203,140.714,66.992)
OP2: (20.452,142.809,66.211)
C3': (23.739,140.427,69.356)
C1': (25.293,141.022,67.725)
C5': (22.079,139.644,67.560)
O6: (29.146,144.342,64.574)
O4': (24.379,140.185,67.071)
C8: (25.420,143.161,66.357)
C2: (29.217,141.039,65.879)
C6: (28.722,143.314,65.115)
C5: (27.426,143.060,65.650)
C4: (27.189,141.852,66.271)
P: (20.424,141.347,66.428)
C4': (23.491,139.612,68.079)
C2': (24.437,141.666,68.805)
O2': (25.250,142.371,69.720)
N1: (29.566,142.221,65.279)
N2: (30.162,140.090,65.900)
N3: (28.025,140.802,66.413)
N7: (26.293,143.861,65.687)
N9: (25.919,141.957,66.796)
O5': (21.660,141.002,67.367)
O3': (24.655,139.700,70.177)
OP2: (20.452,142.809,66.211)
C3': (23.739,140.427,69.356)
C1': (25.293,141.022,67.725)
C5': (22.079,139.644,67.560)
O6: (29.146,144.342,64.574)
O4': (24.379,140.185,67.071)
C8: (25.420,143.161,66.357)
C2: (29.217,141.039,65.879)
C6: (28.722,143.314,65.115)
C5: (27.426,143.060,65.650)
C4: (27.189,141.852,66.271)
P: (20.424,141.347,66.428)
C4': (23.491,139.612,68.079)
C2': (24.437,141.666,68.805)
O2': (25.250,142.371,69.720)
N1: (29.566,142.221,65.279)
N2: (30.162,140.090,65.900)
N3: (28.025,140.802,66.413)
N7: (26.293,143.861,65.687)
N9: (25.919,141.957,66.796)
O5': (21.660,141.002,67.367)
O3': (24.655,139.700,70.177)
Image (generated by PyMOL):