Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -10.985 95.151 94.434 1.00 49.39 O
ATOM 2 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 3 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 4 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 5 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
ATOM 6 C5' G A 552 -8.165 94.653 95.445 1.00 50.46 C
ATOM 7 C4' G A 552 -7.104 95.339 96.268 1.00 49.94 C
ATOM 8 O4' G A 552 -7.552 96.664 96.657 1.00 51.66 O
ATOM 9 C3' G A 552 -6.762 94.670 97.587 1.00 50.15 C
ATOM 10 O3' G A 552 -5.862 93.603 97.344 1.00 49.87 O
ATOM 11 C2' G A 552 -6.141 95.819 98.370 1.00 50.70 C
ATOM 12 O2' G A 552 -4.807 96.090 98.003 1.00 52.32 O
ATOM 13 C1' G A 552 -7.020 96.992 97.931 1.00 50.68 C
ATOM 14 N9 G A 552 -8.126 97.229 98.854 1.00 51.85 N
ATOM 15 C8 G A 552 -9.293 96.509 98.946 1.00 51.48 C
ATOM 16 N7 G A 552 -10.078 96.924 99.902 1.00 53.38 N
ATOM 17 C5 G A 552 -9.396 97.992 100.470 1.00 52.80 C
ATOM 18 C6 G A 552 -9.750 98.836 101.557 1.00 53.30 C
ATOM 19 O6 G A 552 -10.770 98.804 102.260 1.00 53.63 O
ATOM 20 N1 G A 552 -8.770 99.793 101.802 1.00 54.11 N
ATOM 21 C2 G A 552 -7.599 99.921 101.099 1.00 53.74 C
ATOM 22 N2 G A 552 -6.786 100.911 101.494 1.00 53.51 N
ATOM 23 N3 G A 552 -7.253 99.138 100.087 1.00 52.91 N
ATOM 24 C4 G A 552 -8.193 98.201 99.828 1.00 52.27 C
ATOM 25 P A A 553 -5.349 92.677 98.553 1.00 52.22 P
ATOM 26 OP1 A A 553 -5.924 91.327 98.322 1.00 49.03 O
ATOM 27 OP2 A A 553 -5.555 93.355 99.855 1.00 46.64 O
ATOM 28 O5' A A 553 -3.782 92.571 98.273 1.00 51.73 O
TER
ATOM 1 O3' A B 579 -6.482 102.478 106.294 1.00 54.18 O
ATOM 2 P G B 580 -6.418 102.847 104.730 1.00 53.06 P
ATOM 3 OP1 G B 580 -6.188 104.308 104.656 1.00 52.63 O
ATOM 4 OP2 G B 580 -7.595 102.246 104.039 1.00 54.37 O
ATOM 5 O5' G B 580 -5.128 102.078 104.198 1.00 52.46 O
ATOM 6 C5' G B 580 -3.809 102.377 104.706 1.00 47.80 C
ATOM 7 C4' G B 580 -2.801 101.436 104.093 1.00 46.37 C
ATOM 8 O4' G B 580 -3.040 100.085 104.565 1.00 45.04 O
ATOM 9 C3' G B 580 -2.879 101.335 102.579 1.00 46.65 C
ATOM 10 O3' G B 580 -2.079 102.336 101.971 1.00 49.91 O
ATOM 11 C2' G B 580 -2.286 99.959 102.306 1.00 46.55 C
ATOM 12 O2' G B 580 -0.872 99.975 102.274 1.00 49.00 O
ATOM 13 C1' G B 580 -2.783 99.160 103.519 1.00 44.75 C
ATOM 14 N9 G B 580 -4.018 98.438 103.236 1.00 44.04 N
ATOM 15 C8 G B 580 -5.302 98.889 103.439 1.00 44.48 C
ATOM 16 N7 G B 580 -6.209 98.045 103.036 1.00 44.64 N
ATOM 17 C5 G B 580 -5.485 96.965 102.554 1.00 43.29 C
ATOM 18 C6 G B 580 -5.927 95.764 101.980 1.00 42.85 C
ATOM 19 O6 G B 580 -7.090 95.397 101.768 1.00 46.81 O
ATOM 20 N1 G B 580 -4.863 94.944 101.628 1.00 42.43 N
ATOM 21 C2 G B 580 -3.537 95.246 101.808 1.00 43.60 C
ATOM 22 N2 G B 580 -2.651 94.310 101.418 1.00 43.65 N
ATOM 23 N3 G B 580 -3.110 96.376 102.337 1.00 42.93 N
ATOM 24 C4 G B 580 -4.131 97.185 102.683 1.00 43.37 C
ATOM 25 P A B 581 -2.754 103.662 101.370 1.00 52.22 P
ATOM 26 OP1 A B 581 -2.764 104.690 102.453 1.00 49.02 O
ATOM 27 OP2 A B 581 -4.012 103.320 100.665 1.00 50.00 O
ATOM 28 O5' A B 581 -1.706 104.128 100.269 1.00 51.84 O
TER
ATOM 2 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 3 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 4 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 5 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
ATOM 6 C5' G A 552 -8.165 94.653 95.445 1.00 50.46 C
ATOM 7 C4' G A 552 -7.104 95.339 96.268 1.00 49.94 C
ATOM 8 O4' G A 552 -7.552 96.664 96.657 1.00 51.66 O
ATOM 9 C3' G A 552 -6.762 94.670 97.587 1.00 50.15 C
ATOM 10 O3' G A 552 -5.862 93.603 97.344 1.00 49.87 O
ATOM 11 C2' G A 552 -6.141 95.819 98.370 1.00 50.70 C
ATOM 12 O2' G A 552 -4.807 96.090 98.003 1.00 52.32 O
ATOM 13 C1' G A 552 -7.020 96.992 97.931 1.00 50.68 C
ATOM 14 N9 G A 552 -8.126 97.229 98.854 1.00 51.85 N
ATOM 15 C8 G A 552 -9.293 96.509 98.946 1.00 51.48 C
ATOM 16 N7 G A 552 -10.078 96.924 99.902 1.00 53.38 N
ATOM 17 C5 G A 552 -9.396 97.992 100.470 1.00 52.80 C
ATOM 18 C6 G A 552 -9.750 98.836 101.557 1.00 53.30 C
ATOM 19 O6 G A 552 -10.770 98.804 102.260 1.00 53.63 O
ATOM 20 N1 G A 552 -8.770 99.793 101.802 1.00 54.11 N
ATOM 21 C2 G A 552 -7.599 99.921 101.099 1.00 53.74 C
ATOM 22 N2 G A 552 -6.786 100.911 101.494 1.00 53.51 N
ATOM 23 N3 G A 552 -7.253 99.138 100.087 1.00 52.91 N
ATOM 24 C4 G A 552 -8.193 98.201 99.828 1.00 52.27 C
ATOM 25 P A A 553 -5.349 92.677 98.553 1.00 52.22 P
ATOM 26 OP1 A A 553 -5.924 91.327 98.322 1.00 49.03 O
ATOM 27 OP2 A A 553 -5.555 93.355 99.855 1.00 46.64 O
ATOM 28 O5' A A 553 -3.782 92.571 98.273 1.00 51.73 O
TER
ATOM 1 O3' A B 579 -6.482 102.478 106.294 1.00 54.18 O
ATOM 2 P G B 580 -6.418 102.847 104.730 1.00 53.06 P
ATOM 3 OP1 G B 580 -6.188 104.308 104.656 1.00 52.63 O
ATOM 4 OP2 G B 580 -7.595 102.246 104.039 1.00 54.37 O
ATOM 5 O5' G B 580 -5.128 102.078 104.198 1.00 52.46 O
ATOM 6 C5' G B 580 -3.809 102.377 104.706 1.00 47.80 C
ATOM 7 C4' G B 580 -2.801 101.436 104.093 1.00 46.37 C
ATOM 8 O4' G B 580 -3.040 100.085 104.565 1.00 45.04 O
ATOM 9 C3' G B 580 -2.879 101.335 102.579 1.00 46.65 C
ATOM 10 O3' G B 580 -2.079 102.336 101.971 1.00 49.91 O
ATOM 11 C2' G B 580 -2.286 99.959 102.306 1.00 46.55 C
ATOM 12 O2' G B 580 -0.872 99.975 102.274 1.00 49.00 O
ATOM 13 C1' G B 580 -2.783 99.160 103.519 1.00 44.75 C
ATOM 14 N9 G B 580 -4.018 98.438 103.236 1.00 44.04 N
ATOM 15 C8 G B 580 -5.302 98.889 103.439 1.00 44.48 C
ATOM 16 N7 G B 580 -6.209 98.045 103.036 1.00 44.64 N
ATOM 17 C5 G B 580 -5.485 96.965 102.554 1.00 43.29 C
ATOM 18 C6 G B 580 -5.927 95.764 101.980 1.00 42.85 C
ATOM 19 O6 G B 580 -7.090 95.397 101.768 1.00 46.81 O
ATOM 20 N1 G B 580 -4.863 94.944 101.628 1.00 42.43 N
ATOM 21 C2 G B 580 -3.537 95.246 101.808 1.00 43.60 C
ATOM 22 N2 G B 580 -2.651 94.310 101.418 1.00 43.65 N
ATOM 23 N3 G B 580 -3.110 96.376 102.337 1.00 42.93 N
ATOM 24 C4 G B 580 -4.131 97.185 102.683 1.00 43.37 C
ATOM 25 P A B 581 -2.754 103.662 101.370 1.00 52.22 P
ATOM 26 OP1 A B 581 -2.764 104.690 102.453 1.00 49.02 O
ATOM 27 OP2 A B 581 -4.012 103.320 100.665 1.00 50.00 O
ATOM 28 O5' A B 581 -1.706 104.128 100.269 1.00 51.84 O
TER
Atoms:
OP1: (-10.548,92.731,94.861)
OP2: (-11.792,94.181,96.583)
C3': (-6.762,94.670,97.587)
C1': (-7.020,96.992,97.931)
C5': (-8.165,94.653,95.445)
O6: (-10.770,98.804,102.260)
O4': (-7.552,96.664,96.657)
C8: (-9.293,96.509,98.946)
C2: (-7.599,99.921,101.099)
C6: (-9.750,98.836,101.557)
C5: (-9.396,97.992,100.470)
C4: (-8.193,98.201,99.828)
P: (-10.733,94.034,95.551)
C4': (-7.104,95.339,96.268)
C2': (-6.141,95.819,98.370)
O2': (-4.807,96.090,98.003)
N1: (-8.770,99.793,101.802)
N2: (-6.786,100.911,101.494)
N3: (-7.253,99.138,100.087)
N7: (-10.078,96.924,99.902)
N9: (-8.126,97.229,98.854)
O5': (-9.357,94.466,96.230)
O3': (-5.862,93.603,97.344)
OP2: (-11.792,94.181,96.583)
C3': (-6.762,94.670,97.587)
C1': (-7.020,96.992,97.931)
C5': (-8.165,94.653,95.445)
O6: (-10.770,98.804,102.260)
O4': (-7.552,96.664,96.657)
C8: (-9.293,96.509,98.946)
C2: (-7.599,99.921,101.099)
C6: (-9.750,98.836,101.557)
C5: (-9.396,97.992,100.470)
C4: (-8.193,98.201,99.828)
P: (-10.733,94.034,95.551)
C4': (-7.104,95.339,96.268)
C2': (-6.141,95.819,98.370)
O2': (-4.807,96.090,98.003)
N1: (-8.770,99.793,101.802)
N2: (-6.786,100.911,101.494)
N3: (-7.253,99.138,100.087)
N7: (-10.078,96.924,99.902)
N9: (-8.126,97.229,98.854)
O5': (-9.357,94.466,96.230)
O3': (-5.862,93.603,97.344)
OP1: (-6.188,104.308,104.656)
OP2: (-7.595,102.246,104.039)
C3': (-2.879,101.335,102.579)
C1': (-2.783,99.160,103.519)
C5': (-3.809,102.377,104.706)
O6: (-7.090,95.397,101.768)
O4': (-3.040,100.085,104.565)
C8: (-5.302,98.889,103.439)
C2: (-3.537,95.246,101.808)
C6: (-5.927,95.764,101.980)
C5: (-5.485,96.965,102.554)
C4: (-4.131,97.185,102.683)
P: (-6.418,102.847,104.730)
C4': (-2.801,101.436,104.093)
C2': (-2.286,99.959,102.306)
O2': (-0.872,99.975,102.274)
N1: (-4.863,94.944,101.628)
N2: (-2.651,94.310,101.418)
N3: (-3.110,96.376,102.337)
N7: (-6.209,98.045,103.036)
N9: (-4.018,98.438,103.236)
O5': (-5.128,102.078,104.198)
O3': (-2.079,102.336,101.971)
OP2: (-7.595,102.246,104.039)
C3': (-2.879,101.335,102.579)
C1': (-2.783,99.160,103.519)
C5': (-3.809,102.377,104.706)
O6: (-7.090,95.397,101.768)
O4': (-3.040,100.085,104.565)
C8: (-5.302,98.889,103.439)
C2: (-3.537,95.246,101.808)
C6: (-5.927,95.764,101.980)
C5: (-5.485,96.965,102.554)
C4: (-4.131,97.185,102.683)
P: (-6.418,102.847,104.730)
C4': (-2.801,101.436,104.093)
C2': (-2.286,99.959,102.306)
O2': (-0.872,99.975,102.274)
N1: (-4.863,94.944,101.628)
N2: (-2.651,94.310,101.418)
N3: (-3.110,96.376,102.337)
N7: (-6.209,98.045,103.036)
N9: (-4.018,98.438,103.236)
O5': (-5.128,102.078,104.198)
O3': (-2.079,102.336,101.971)
Image (generated by PyMOL):