Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -11.063 94.940 94.200 1.00 52.13 O
ATOM 2 P G A 552 -10.772 93.823 95.310 1.00 56.31 P
ATOM 3 OP1 G A 552 -10.528 92.535 94.609 1.00 54.01 O
ATOM 4 OP2 G A 552 -11.843 93.915 96.337 1.00 56.53 O
ATOM 5 O5' G A 552 -9.414 94.297 95.992 1.00 57.31 O
ATOM 6 C5' G A 552 -8.211 94.459 95.220 1.00 55.38 C
ATOM 7 C4' G A 552 -7.170 95.190 96.030 1.00 54.53 C
ATOM 8 O4' G A 552 -7.668 96.500 96.411 1.00 55.44 O
ATOM 9 C3' G A 552 -6.791 94.547 97.352 1.00 53.59 C
ATOM 10 O3' G A 552 -5.854 93.510 97.110 1.00 53.26 O
ATOM 11 C2' G A 552 -6.196 95.726 98.111 1.00 54.95 C
ATOM 12 O2' G A 552 -4.880 96.031 97.707 1.00 57.33 O
ATOM 13 C1' G A 552 -7.114 96.869 97.666 1.00 56.01 C
ATOM 14 N9 G A 552 -8.204 97.121 98.605 1.00 57.58 N
ATOM 15 C8 G A 552 -9.368 96.399 98.737 1.00 57.94 C
ATOM 16 N7 G A 552 -10.144 96.845 99.687 1.00 59.55 N
ATOM 17 C5 G A 552 -9.458 97.933 100.211 1.00 59.97 C
ATOM 18 C6 G A 552 -9.805 98.818 101.270 1.00 60.63 C
ATOM 19 O6 G A 552 -10.827 98.824 101.973 1.00 62.47 O
ATOM 20 N1 G A 552 -8.818 99.774 101.480 1.00 61.31 N
ATOM 21 C2 G A 552 -7.651 99.875 100.767 1.00 60.90 C
ATOM 22 N2 G A 552 -6.826 100.867 101.132 1.00 60.61 N
ATOM 23 N3 G A 552 -7.317 99.063 99.774 1.00 60.33 N
ATOM 24 C4 G A 552 -8.260 98.120 99.553 1.00 59.17 C
ATOM 25 P A A 553 -5.362 92.555 98.310 1.00 54.32 P
ATOM 26 OP1 A A 553 -5.945 91.210 98.072 1.00 51.52 O
ATOM 27 OP2 A A 553 -5.557 93.227 99.617 1.00 50.45 O
ATOM 28 O5' A A 553 -3.795 92.430 98.044 1.00 54.86 O
TER
ATOM 1 O3' A B 579 -6.523 102.382 106.101 1.00 59.33 O
ATOM 2 P G B 580 -6.485 102.758 104.539 1.00 57.53 P
ATOM 3 OP1 G B 580 -6.266 104.222 104.463 1.00 57.72 O
ATOM 4 OP2 G B 580 -7.665 102.149 103.868 1.00 59.23 O
ATOM 5 O5' G B 580 -5.198 102.002 103.983 1.00 57.12 O
ATOM 6 C5' G B 580 -3.878 102.303 104.477 1.00 52.35 C
ATOM 7 C4' G B 580 -2.880 101.355 103.865 1.00 52.31 C
ATOM 8 O4' G B 580 -3.140 100.010 104.336 1.00 51.21 O
ATOM 9 C3' G B 580 -2.950 101.253 102.350 1.00 52.54 C
ATOM 10 O3' G B 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 11 C2' G B 580 -2.369 99.870 102.083 1.00 52.15 C
ATOM 12 O2' G B 580 -0.957 99.852 102.055 1.00 55.12 O
ATOM 13 C1' G B 580 -2.880 99.081 103.295 1.00 50.91 C
ATOM 14 N9 G B 580 -4.114 98.359 103.003 1.00 49.33 N
ATOM 15 C8 G B 580 -5.404 98.802 103.189 1.00 48.45 C
ATOM 16 N7 G B 580 -6.300 97.947 102.783 1.00 48.86 N
ATOM 17 C5 G B 580 -5.560 96.872 102.314 1.00 47.58 C
ATOM 18 C6 G B 580 -5.983 95.661 101.740 1.00 46.44 C
ATOM 19 O6 G B 580 -7.135 95.280 101.518 1.00 48.48 O
ATOM 20 N1 G B 580 -4.906 94.851 101.404 1.00 46.16 N
ATOM 21 C2 G B 580 -3.585 95.169 101.601 1.00 47.91 C
ATOM 22 N2 G B 580 -2.682 94.242 101.232 1.00 46.33 N
ATOM 23 N3 G B 580 -3.177 96.307 102.128 1.00 47.69 N
ATOM 24 C4 G B 580 -4.210 97.106 102.457 1.00 47.81 C
ATOM 25 P A B 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 26 OP1 A B 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 27 OP2 A B 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 28 O5' A B 581 -1.807 104.098 100.077 1.00 57.78 O
TER
ATOM 2 P G A 552 -10.772 93.823 95.310 1.00 56.31 P
ATOM 3 OP1 G A 552 -10.528 92.535 94.609 1.00 54.01 O
ATOM 4 OP2 G A 552 -11.843 93.915 96.337 1.00 56.53 O
ATOM 5 O5' G A 552 -9.414 94.297 95.992 1.00 57.31 O
ATOM 6 C5' G A 552 -8.211 94.459 95.220 1.00 55.38 C
ATOM 7 C4' G A 552 -7.170 95.190 96.030 1.00 54.53 C
ATOM 8 O4' G A 552 -7.668 96.500 96.411 1.00 55.44 O
ATOM 9 C3' G A 552 -6.791 94.547 97.352 1.00 53.59 C
ATOM 10 O3' G A 552 -5.854 93.510 97.110 1.00 53.26 O
ATOM 11 C2' G A 552 -6.196 95.726 98.111 1.00 54.95 C
ATOM 12 O2' G A 552 -4.880 96.031 97.707 1.00 57.33 O
ATOM 13 C1' G A 552 -7.114 96.869 97.666 1.00 56.01 C
ATOM 14 N9 G A 552 -8.204 97.121 98.605 1.00 57.58 N
ATOM 15 C8 G A 552 -9.368 96.399 98.737 1.00 57.94 C
ATOM 16 N7 G A 552 -10.144 96.845 99.687 1.00 59.55 N
ATOM 17 C5 G A 552 -9.458 97.933 100.211 1.00 59.97 C
ATOM 18 C6 G A 552 -9.805 98.818 101.270 1.00 60.63 C
ATOM 19 O6 G A 552 -10.827 98.824 101.973 1.00 62.47 O
ATOM 20 N1 G A 552 -8.818 99.774 101.480 1.00 61.31 N
ATOM 21 C2 G A 552 -7.651 99.875 100.767 1.00 60.90 C
ATOM 22 N2 G A 552 -6.826 100.867 101.132 1.00 60.61 N
ATOM 23 N3 G A 552 -7.317 99.063 99.774 1.00 60.33 N
ATOM 24 C4 G A 552 -8.260 98.120 99.553 1.00 59.17 C
ATOM 25 P A A 553 -5.362 92.555 98.310 1.00 54.32 P
ATOM 26 OP1 A A 553 -5.945 91.210 98.072 1.00 51.52 O
ATOM 27 OP2 A A 553 -5.557 93.227 99.617 1.00 50.45 O
ATOM 28 O5' A A 553 -3.795 92.430 98.044 1.00 54.86 O
TER
ATOM 1 O3' A B 579 -6.523 102.382 106.101 1.00 59.33 O
ATOM 2 P G B 580 -6.485 102.758 104.539 1.00 57.53 P
ATOM 3 OP1 G B 580 -6.266 104.222 104.463 1.00 57.72 O
ATOM 4 OP2 G B 580 -7.665 102.149 103.868 1.00 59.23 O
ATOM 5 O5' G B 580 -5.198 102.002 103.983 1.00 57.12 O
ATOM 6 C5' G B 580 -3.878 102.303 104.477 1.00 52.35 C
ATOM 7 C4' G B 580 -2.880 101.355 103.865 1.00 52.31 C
ATOM 8 O4' G B 580 -3.140 100.010 104.336 1.00 51.21 O
ATOM 9 C3' G B 580 -2.950 101.253 102.350 1.00 52.54 C
ATOM 10 O3' G B 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 11 C2' G B 580 -2.369 99.870 102.083 1.00 52.15 C
ATOM 12 O2' G B 580 -0.957 99.852 102.055 1.00 55.12 O
ATOM 13 C1' G B 580 -2.880 99.081 103.295 1.00 50.91 C
ATOM 14 N9 G B 580 -4.114 98.359 103.003 1.00 49.33 N
ATOM 15 C8 G B 580 -5.404 98.802 103.189 1.00 48.45 C
ATOM 16 N7 G B 580 -6.300 97.947 102.783 1.00 48.86 N
ATOM 17 C5 G B 580 -5.560 96.872 102.314 1.00 47.58 C
ATOM 18 C6 G B 580 -5.983 95.661 101.740 1.00 46.44 C
ATOM 19 O6 G B 580 -7.135 95.280 101.518 1.00 48.48 O
ATOM 20 N1 G B 580 -4.906 94.851 101.404 1.00 46.16 N
ATOM 21 C2 G B 580 -3.585 95.169 101.601 1.00 47.91 C
ATOM 22 N2 G B 580 -2.682 94.242 101.232 1.00 46.33 N
ATOM 23 N3 G B 580 -3.177 96.307 102.128 1.00 47.69 N
ATOM 24 C4 G B 580 -4.210 97.106 102.457 1.00 47.81 C
ATOM 25 P A B 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 26 OP1 A B 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 27 OP2 A B 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 28 O5' A B 581 -1.807 104.098 100.077 1.00 57.78 O
TER
Atoms:
OP1: (-10.528,92.535,94.609)
OP2: (-11.843,93.915,96.337)
C3': (-6.791,94.547,97.352)
C1': (-7.114,96.869,97.666)
C5': (-8.211,94.459,95.220)
O6: (-10.827,98.824,101.973)
O4': (-7.668,96.500,96.411)
C8: (-9.368,96.399,98.737)
C2: (-7.651,99.875,100.767)
C6: (-9.805,98.818,101.270)
C5: (-9.458,97.933,100.211)
C4: (-8.260,98.120,99.553)
P: (-10.772,93.823,95.310)
C4': (-7.170,95.190,96.030)
C2': (-6.196,95.726,98.111)
O2': (-4.880,96.031,97.707)
N1: (-8.818,99.774,101.480)
N2: (-6.826,100.867,101.132)
N3: (-7.317,99.063,99.774)
N7: (-10.144,96.845,99.687)
N9: (-8.204,97.121,98.605)
O5': (-9.414,94.297,95.992)
O3': (-5.854,93.510,97.110)
OP2: (-11.843,93.915,96.337)
C3': (-6.791,94.547,97.352)
C1': (-7.114,96.869,97.666)
C5': (-8.211,94.459,95.220)
O6: (-10.827,98.824,101.973)
O4': (-7.668,96.500,96.411)
C8: (-9.368,96.399,98.737)
C2: (-7.651,99.875,100.767)
C6: (-9.805,98.818,101.270)
C5: (-9.458,97.933,100.211)
C4: (-8.260,98.120,99.553)
P: (-10.772,93.823,95.310)
C4': (-7.170,95.190,96.030)
C2': (-6.196,95.726,98.111)
O2': (-4.880,96.031,97.707)
N1: (-8.818,99.774,101.480)
N2: (-6.826,100.867,101.132)
N3: (-7.317,99.063,99.774)
N7: (-10.144,96.845,99.687)
N9: (-8.204,97.121,98.605)
O5': (-9.414,94.297,95.992)
O3': (-5.854,93.510,97.110)
OP1: (-6.266,104.222,104.463)
OP2: (-7.665,102.149,103.868)
C3': (-2.950,101.253,102.350)
C1': (-2.880,99.081,103.295)
C5': (-3.878,102.303,104.477)
O6: (-7.135,95.280,101.518)
O4': (-3.140,100.010,104.336)
C8: (-5.404,98.802,103.189)
C2: (-3.585,95.169,101.601)
C6: (-5.983,95.661,101.740)
C5: (-5.560,96.872,102.314)
C4: (-4.210,97.106,102.457)
P: (-6.485,102.758,104.539)
C4': (-2.880,101.355,103.865)
C2': (-2.369,99.870,102.083)
O2': (-0.957,99.852,102.055)
N1: (-4.906,94.851,101.404)
N2: (-2.682,94.242,101.232)
N3: (-3.177,96.307,102.128)
N7: (-6.300,97.947,102.783)
N9: (-4.114,98.359,103.003)
O5': (-5.198,102.002,103.983)
O3': (-2.158,102.260,101.739)
OP2: (-7.665,102.149,103.868)
C3': (-2.950,101.253,102.350)
C1': (-2.880,99.081,103.295)
C5': (-3.878,102.303,104.477)
O6: (-7.135,95.280,101.518)
O4': (-3.140,100.010,104.336)
C8: (-5.404,98.802,103.189)
C2: (-3.585,95.169,101.601)
C6: (-5.983,95.661,101.740)
C5: (-5.560,96.872,102.314)
C4: (-4.210,97.106,102.457)
P: (-6.485,102.758,104.539)
C4': (-2.880,101.355,103.865)
C2': (-2.369,99.870,102.083)
O2': (-0.957,99.852,102.055)
N1: (-4.906,94.851,101.404)
N2: (-2.682,94.242,101.232)
N3: (-3.177,96.307,102.128)
N7: (-6.300,97.947,102.783)
N9: (-4.114,98.359,103.003)
O5': (-5.198,102.002,103.983)
O3': (-2.158,102.260,101.739)
Image (generated by PyMOL):