Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 18.890 128.166 61.637 1.00 40.75 O
ATOM 2 P G A1278 18.756 128.115 63.242 1.00 41.33 P
ATOM 3 OP1 G A1278 19.331 126.810 63.663 1.00 40.80 O
ATOM 4 OP2 G A1278 17.387 128.474 63.661 1.00 40.53 O
ATOM 5 O5' G A1278 19.714 129.287 63.734 1.00 42.43 O
ATOM 6 C5' G A1278 21.102 129.314 63.353 1.00 41.15 C
ATOM 7 C4' G A1278 21.719 130.632 63.744 1.00 42.02 C
ATOM 8 O4' G A1278 21.126 131.705 62.965 1.00 42.26 O
ATOM 9 C3' G A1278 21.486 131.043 65.185 1.00 40.98 C
ATOM 10 O3' G A1278 22.424 130.415 66.049 1.00 42.01 O
ATOM 11 C2' G A1278 21.672 132.553 65.115 1.00 41.57 C
ATOM 12 O2' G A1278 23.044 132.894 65.091 1.00 40.38 O
ATOM 13 C1' G A1278 21.014 132.876 63.766 1.00 40.68 C
ATOM 14 N9 G A1278 19.594 133.196 63.893 1.00 39.35 N
ATOM 15 C8 G A1278 18.549 132.332 63.689 1.00 39.88 C
ATOM 16 N7 G A1278 17.386 132.862 63.950 1.00 40.92 N
ATOM 17 C5 G A1278 17.676 134.161 64.336 1.00 38.75 C
ATOM 18 C6 G A1278 16.816 135.200 64.762 1.00 38.95 C
ATOM 19 O6 G A1278 15.591 135.173 64.909 1.00 36.17 O
ATOM 20 N1 G A1278 17.518 136.365 65.040 1.00 37.16 N
ATOM 21 C2 G A1278 18.868 136.514 64.931 1.00 37.46 C
ATOM 22 N2 G A1278 19.343 137.744 65.217 1.00 37.87 N
ATOM 23 N3 G A1278 19.694 135.540 64.562 1.00 39.84 N
ATOM 24 C4 G A1278 19.031 134.397 64.280 1.00 39.71 C
ATOM 25 P U A1279 21.980 129.969 67.534 1.00 42.86 P
ATOM 26 OP1 U A1279 23.179 129.311 68.105 1.00 45.39 O
ATOM 27 OP2 U A1279 20.691 129.226 67.469 1.00 42.15 O
ATOM 28 O5' U A1279 21.754 131.337 68.315 1.00 40.76 O
TER
ATOM 1 O3' U B 505 20.627 140.506 64.946 1.00 40.85 O
ATOM 2 P G B 506 20.331 141.247 66.344 1.00 45.49 P
ATOM 3 OP1 G B 506 19.128 140.601 66.933 1.00 44.81 O
ATOM 4 OP2 G B 506 20.341 142.722 66.151 1.00 44.48 O
ATOM 5 O5' G B 506 21.590 140.878 67.244 1.00 45.56 O
ATOM 6 C5' G B 506 22.023 139.516 67.388 1.00 43.35 C
ATOM 7 C4' G B 506 23.432 139.477 67.926 1.00 41.78 C
ATOM 8 O4' G B 506 24.340 140.044 66.929 1.00 39.75 O
ATOM 9 C3' G B 506 23.657 140.293 69.207 1.00 40.56 C
ATOM 10 O3' G B 506 24.586 139.601 70.039 1.00 40.73 O
ATOM 11 C2' G B 506 24.333 141.544 68.664 1.00 40.99 C
ATOM 12 O2' G B 506 25.117 142.260 69.595 1.00 41.74 O
ATOM 13 C1' G B 506 25.214 140.918 67.592 1.00 40.33 C
ATOM 14 N9 G B 506 25.826 141.866 66.669 1.00 39.76 N
ATOM 15 C8 G B 506 25.323 143.081 66.263 1.00 37.98 C
ATOM 16 N7 G B 506 26.193 143.799 65.610 1.00 38.76 N
ATOM 17 C5 G B 506 27.324 142.995 65.546 1.00 38.83 C
ATOM 18 C6 G B 506 28.615 143.262 65.018 1.00 38.98 C
ATOM 19 O6 G B 506 29.039 144.305 64.513 1.00 40.48 O
ATOM 20 N1 G B 506 29.459 142.163 65.144 1.00 36.49 N
ATOM 21 C2 G B 506 29.113 140.966 65.709 1.00 36.61 C
ATOM 22 N2 G B 506 30.060 140.014 65.701 1.00 34.09 N
ATOM 23 N3 G B 506 27.922 140.715 66.239 1.00 39.09 N
ATOM 24 C4 G B 506 27.087 141.771 66.130 1.00 39.36 C
ATOM 25 P A B 507 24.434 139.645 71.646 1.00 40.49 P
ATOM 26 OP1 A B 507 23.036 139.988 71.988 1.00 39.03 O
ATOM 27 OP2 A B 507 25.541 140.478 72.189 1.00 40.29 O
ATOM 28 O5' A B 507 24.735 138.132 72.059 1.00 38.83 O
TER
ATOM 2 P G A1278 18.756 128.115 63.242 1.00 41.33 P
ATOM 3 OP1 G A1278 19.331 126.810 63.663 1.00 40.80 O
ATOM 4 OP2 G A1278 17.387 128.474 63.661 1.00 40.53 O
ATOM 5 O5' G A1278 19.714 129.287 63.734 1.00 42.43 O
ATOM 6 C5' G A1278 21.102 129.314 63.353 1.00 41.15 C
ATOM 7 C4' G A1278 21.719 130.632 63.744 1.00 42.02 C
ATOM 8 O4' G A1278 21.126 131.705 62.965 1.00 42.26 O
ATOM 9 C3' G A1278 21.486 131.043 65.185 1.00 40.98 C
ATOM 10 O3' G A1278 22.424 130.415 66.049 1.00 42.01 O
ATOM 11 C2' G A1278 21.672 132.553 65.115 1.00 41.57 C
ATOM 12 O2' G A1278 23.044 132.894 65.091 1.00 40.38 O
ATOM 13 C1' G A1278 21.014 132.876 63.766 1.00 40.68 C
ATOM 14 N9 G A1278 19.594 133.196 63.893 1.00 39.35 N
ATOM 15 C8 G A1278 18.549 132.332 63.689 1.00 39.88 C
ATOM 16 N7 G A1278 17.386 132.862 63.950 1.00 40.92 N
ATOM 17 C5 G A1278 17.676 134.161 64.336 1.00 38.75 C
ATOM 18 C6 G A1278 16.816 135.200 64.762 1.00 38.95 C
ATOM 19 O6 G A1278 15.591 135.173 64.909 1.00 36.17 O
ATOM 20 N1 G A1278 17.518 136.365 65.040 1.00 37.16 N
ATOM 21 C2 G A1278 18.868 136.514 64.931 1.00 37.46 C
ATOM 22 N2 G A1278 19.343 137.744 65.217 1.00 37.87 N
ATOM 23 N3 G A1278 19.694 135.540 64.562 1.00 39.84 N
ATOM 24 C4 G A1278 19.031 134.397 64.280 1.00 39.71 C
ATOM 25 P U A1279 21.980 129.969 67.534 1.00 42.86 P
ATOM 26 OP1 U A1279 23.179 129.311 68.105 1.00 45.39 O
ATOM 27 OP2 U A1279 20.691 129.226 67.469 1.00 42.15 O
ATOM 28 O5' U A1279 21.754 131.337 68.315 1.00 40.76 O
TER
ATOM 1 O3' U B 505 20.627 140.506 64.946 1.00 40.85 O
ATOM 2 P G B 506 20.331 141.247 66.344 1.00 45.49 P
ATOM 3 OP1 G B 506 19.128 140.601 66.933 1.00 44.81 O
ATOM 4 OP2 G B 506 20.341 142.722 66.151 1.00 44.48 O
ATOM 5 O5' G B 506 21.590 140.878 67.244 1.00 45.56 O
ATOM 6 C5' G B 506 22.023 139.516 67.388 1.00 43.35 C
ATOM 7 C4' G B 506 23.432 139.477 67.926 1.00 41.78 C
ATOM 8 O4' G B 506 24.340 140.044 66.929 1.00 39.75 O
ATOM 9 C3' G B 506 23.657 140.293 69.207 1.00 40.56 C
ATOM 10 O3' G B 506 24.586 139.601 70.039 1.00 40.73 O
ATOM 11 C2' G B 506 24.333 141.544 68.664 1.00 40.99 C
ATOM 12 O2' G B 506 25.117 142.260 69.595 1.00 41.74 O
ATOM 13 C1' G B 506 25.214 140.918 67.592 1.00 40.33 C
ATOM 14 N9 G B 506 25.826 141.866 66.669 1.00 39.76 N
ATOM 15 C8 G B 506 25.323 143.081 66.263 1.00 37.98 C
ATOM 16 N7 G B 506 26.193 143.799 65.610 1.00 38.76 N
ATOM 17 C5 G B 506 27.324 142.995 65.546 1.00 38.83 C
ATOM 18 C6 G B 506 28.615 143.262 65.018 1.00 38.98 C
ATOM 19 O6 G B 506 29.039 144.305 64.513 1.00 40.48 O
ATOM 20 N1 G B 506 29.459 142.163 65.144 1.00 36.49 N
ATOM 21 C2 G B 506 29.113 140.966 65.709 1.00 36.61 C
ATOM 22 N2 G B 506 30.060 140.014 65.701 1.00 34.09 N
ATOM 23 N3 G B 506 27.922 140.715 66.239 1.00 39.09 N
ATOM 24 C4 G B 506 27.087 141.771 66.130 1.00 39.36 C
ATOM 25 P A B 507 24.434 139.645 71.646 1.00 40.49 P
ATOM 26 OP1 A B 507 23.036 139.988 71.988 1.00 39.03 O
ATOM 27 OP2 A B 507 25.541 140.478 72.189 1.00 40.29 O
ATOM 28 O5' A B 507 24.735 138.132 72.059 1.00 38.83 O
TER
Atoms:
OP1: (19.331,126.810,63.663)
OP2: (17.387,128.474,63.661)
C3': (21.486,131.043,65.185)
C1': (21.014,132.876,63.766)
C5': (21.102,129.314,63.353)
O6: (15.591,135.173,64.909)
O4': (21.126,131.705,62.965)
C8: (18.549,132.332,63.689)
C2: (18.868,136.514,64.931)
C6: (16.816,135.200,64.762)
C5: (17.676,134.161,64.336)
C4: (19.031,134.397,64.280)
P: (18.756,128.115,63.242)
C4': (21.719,130.632,63.744)
C2': (21.672,132.553,65.115)
O2': (23.044,132.894,65.091)
N1: (17.518,136.365,65.040)
N2: (19.343,137.744,65.217)
N3: (19.694,135.540,64.562)
N7: (17.386,132.862,63.950)
N9: (19.594,133.196,63.893)
O5': (19.714,129.287,63.734)
O3': (22.424,130.415,66.049)
OP2: (17.387,128.474,63.661)
C3': (21.486,131.043,65.185)
C1': (21.014,132.876,63.766)
C5': (21.102,129.314,63.353)
O6: (15.591,135.173,64.909)
O4': (21.126,131.705,62.965)
C8: (18.549,132.332,63.689)
C2: (18.868,136.514,64.931)
C6: (16.816,135.200,64.762)
C5: (17.676,134.161,64.336)
C4: (19.031,134.397,64.280)
P: (18.756,128.115,63.242)
C4': (21.719,130.632,63.744)
C2': (21.672,132.553,65.115)
O2': (23.044,132.894,65.091)
N1: (17.518,136.365,65.040)
N2: (19.343,137.744,65.217)
N3: (19.694,135.540,64.562)
N7: (17.386,132.862,63.950)
N9: (19.594,133.196,63.893)
O5': (19.714,129.287,63.734)
O3': (22.424,130.415,66.049)
OP1: (19.128,140.601,66.933)
OP2: (20.341,142.722,66.151)
C3': (23.657,140.293,69.207)
C1': (25.214,140.918,67.592)
C5': (22.023,139.516,67.388)
O6: (29.039,144.305,64.513)
O4': (24.340,140.044,66.929)
C8: (25.323,143.081,66.263)
C2: (29.113,140.966,65.709)
C6: (28.615,143.262,65.018)
C5: (27.324,142.995,65.546)
C4: (27.087,141.771,66.130)
P: (20.331,141.247,66.344)
C4': (23.432,139.477,67.926)
C2': (24.333,141.544,68.664)
O2': (25.117,142.260,69.595)
N1: (29.459,142.163,65.144)
N2: (30.060,140.014,65.701)
N3: (27.922,140.715,66.239)
N7: (26.193,143.799,65.610)
N9: (25.826,141.866,66.669)
O5': (21.590,140.878,67.244)
O3': (24.586,139.601,70.039)
OP2: (20.341,142.722,66.151)
C3': (23.657,140.293,69.207)
C1': (25.214,140.918,67.592)
C5': (22.023,139.516,67.388)
O6: (29.039,144.305,64.513)
O4': (24.340,140.044,66.929)
C8: (25.323,143.081,66.263)
C2: (29.113,140.966,65.709)
C6: (28.615,143.262,65.018)
C5: (27.324,142.995,65.546)
C4: (27.087,141.771,66.130)
P: (20.331,141.247,66.344)
C4': (23.432,139.477,67.926)
C2': (24.333,141.544,68.664)
O2': (25.117,142.260,69.595)
N1: (29.459,142.163,65.144)
N2: (30.060,140.014,65.701)
N3: (27.922,140.715,66.239)
N7: (26.193,143.799,65.610)
N9: (25.826,141.866,66.669)
O5': (21.590,140.878,67.244)
O3': (24.586,139.601,70.039)
Image (generated by PyMOL):