Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 18.965 128.320 61.653 1.00 38.31 O
ATOM 2 P G A1278 18.847 128.256 63.258 1.00 38.96 P
ATOM 3 OP1 G A1278 19.445 126.962 63.684 1.00 38.28 O
ATOM 4 OP2 G A1278 17.472 128.597 63.674 1.00 37.92 O
ATOM 5 O5' G A1278 19.787 129.441 63.761 1.00 41.40 O
ATOM 6 C5' G A1278 21.190 129.477 63.435 1.00 38.13 C
ATOM 7 C4' G A1278 21.771 130.821 63.807 1.00 40.01 C
ATOM 8 O4' G A1278 21.121 131.866 63.035 1.00 39.59 O
ATOM 9 C3' G A1278 21.558 131.252 65.247 1.00 39.18 C
ATOM 10 O3' G A1278 22.514 130.670 66.121 1.00 40.13 O
ATOM 11 C2' G A1278 21.716 132.761 65.153 1.00 39.28 C
ATOM 12 O2' G A1278 23.082 133.133 65.101 1.00 36.89 O
ATOM 13 C1' G A1278 21.021 133.051 63.816 1.00 38.88 C
ATOM 14 N9 G A1278 19.604 133.373 63.965 1.00 37.97 N
ATOM 15 C8 G A1278 18.552 132.515 63.763 1.00 39.37 C
ATOM 16 N7 G A1278 17.392 133.054 64.021 1.00 39.23 N
ATOM 17 C5 G A1278 17.691 134.349 64.413 1.00 37.26 C
ATOM 18 C6 G A1278 16.836 135.399 64.844 1.00 37.18 C
ATOM 19 O6 G A1278 15.604 135.386 64.989 1.00 32.73 O
ATOM 20 N1 G A1278 17.551 136.555 65.130 1.00 35.78 N
ATOM 21 C2 G A1278 18.904 136.689 65.021 1.00 35.51 C
ATOM 22 N2 G A1278 19.391 137.914 65.303 1.00 35.10 N
ATOM 23 N3 G A1278 19.721 135.707 64.652 1.00 37.74 N
ATOM 24 C4 G A1278 19.051 134.575 64.362 1.00 37.49 C
ATOM 25 P U A1279 22.051 130.149 67.574 1.00 41.68 P
ATOM 26 OP1 U A1279 23.232 129.448 68.143 1.00 42.03 O
ATOM 27 OP2 U A1279 20.754 129.432 67.459 1.00 38.99 O
ATOM 28 O5' U A1279 21.820 131.479 68.410 1.00 38.17 O
TER
ATOM 1 O3' U B 505 20.664 140.645 65.018 1.00 38.62 O
ATOM 2 P G B 506 20.347 141.373 66.421 1.00 42.99 P
ATOM 3 OP1 G B 506 19.166 140.688 67.008 1.00 43.11 O
ATOM 4 OP2 G B 506 20.317 142.846 66.243 1.00 42.23 O
ATOM 5 O5' G B 506 21.615 141.029 67.312 1.00 45.03 O
ATOM 6 C5' G B 506 22.062 139.672 67.470 1.00 41.77 C
ATOM 7 C4' G B 506 23.473 139.656 68.000 1.00 40.22 C
ATOM 8 O4' G B 506 24.359 140.250 67.003 1.00 39.47 O
ATOM 9 C3' G B 506 23.691 140.476 69.278 1.00 40.16 C
ATOM 10 O3' G B 506 24.618 139.776 70.101 1.00 40.38 O
ATOM 11 C2' G B 506 24.373 141.725 68.737 1.00 40.11 C
ATOM 12 O2' G B 506 25.164 142.451 69.653 1.00 41.92 O
ATOM 13 C1' G B 506 25.255 141.092 67.674 1.00 39.08 C
ATOM 14 N9 G B 506 25.883 142.040 66.760 1.00 38.37 N
ATOM 15 C8 G B 506 25.386 143.252 66.344 1.00 33.49 C
ATOM 16 N7 G B 506 26.257 143.961 65.685 1.00 34.06 N
ATOM 17 C5 G B 506 27.387 143.156 65.627 1.00 36.58 C
ATOM 18 C6 G B 506 28.675 143.413 65.078 1.00 37.40 C
ATOM 19 O6 G B 506 29.084 144.439 64.524 1.00 38.13 O
ATOM 20 N1 G B 506 29.526 142.322 65.232 1.00 36.75 N
ATOM 21 C2 G B 506 29.184 141.133 65.828 1.00 36.82 C
ATOM 22 N2 G B 506 30.138 140.189 65.847 1.00 36.20 N
ATOM 23 N3 G B 506 27.991 140.886 66.360 1.00 37.64 N
ATOM 24 C4 G B 506 27.152 141.940 66.232 1.00 38.00 C
ATOM 25 P A B 507 24.496 139.845 71.706 1.00 39.46 P
ATOM 26 OP1 A B 507 23.115 140.218 72.085 1.00 36.60 O
ATOM 27 OP2 A B 507 25.634 140.663 72.201 1.00 38.51 O
ATOM 28 O5' A B 507 24.779 138.333 72.134 1.00 38.35 O
TER
ATOM 2 P G A1278 18.847 128.256 63.258 1.00 38.96 P
ATOM 3 OP1 G A1278 19.445 126.962 63.684 1.00 38.28 O
ATOM 4 OP2 G A1278 17.472 128.597 63.674 1.00 37.92 O
ATOM 5 O5' G A1278 19.787 129.441 63.761 1.00 41.40 O
ATOM 6 C5' G A1278 21.190 129.477 63.435 1.00 38.13 C
ATOM 7 C4' G A1278 21.771 130.821 63.807 1.00 40.01 C
ATOM 8 O4' G A1278 21.121 131.866 63.035 1.00 39.59 O
ATOM 9 C3' G A1278 21.558 131.252 65.247 1.00 39.18 C
ATOM 10 O3' G A1278 22.514 130.670 66.121 1.00 40.13 O
ATOM 11 C2' G A1278 21.716 132.761 65.153 1.00 39.28 C
ATOM 12 O2' G A1278 23.082 133.133 65.101 1.00 36.89 O
ATOM 13 C1' G A1278 21.021 133.051 63.816 1.00 38.88 C
ATOM 14 N9 G A1278 19.604 133.373 63.965 1.00 37.97 N
ATOM 15 C8 G A1278 18.552 132.515 63.763 1.00 39.37 C
ATOM 16 N7 G A1278 17.392 133.054 64.021 1.00 39.23 N
ATOM 17 C5 G A1278 17.691 134.349 64.413 1.00 37.26 C
ATOM 18 C6 G A1278 16.836 135.399 64.844 1.00 37.18 C
ATOM 19 O6 G A1278 15.604 135.386 64.989 1.00 32.73 O
ATOM 20 N1 G A1278 17.551 136.555 65.130 1.00 35.78 N
ATOM 21 C2 G A1278 18.904 136.689 65.021 1.00 35.51 C
ATOM 22 N2 G A1278 19.391 137.914 65.303 1.00 35.10 N
ATOM 23 N3 G A1278 19.721 135.707 64.652 1.00 37.74 N
ATOM 24 C4 G A1278 19.051 134.575 64.362 1.00 37.49 C
ATOM 25 P U A1279 22.051 130.149 67.574 1.00 41.68 P
ATOM 26 OP1 U A1279 23.232 129.448 68.143 1.00 42.03 O
ATOM 27 OP2 U A1279 20.754 129.432 67.459 1.00 38.99 O
ATOM 28 O5' U A1279 21.820 131.479 68.410 1.00 38.17 O
TER
ATOM 1 O3' U B 505 20.664 140.645 65.018 1.00 38.62 O
ATOM 2 P G B 506 20.347 141.373 66.421 1.00 42.99 P
ATOM 3 OP1 G B 506 19.166 140.688 67.008 1.00 43.11 O
ATOM 4 OP2 G B 506 20.317 142.846 66.243 1.00 42.23 O
ATOM 5 O5' G B 506 21.615 141.029 67.312 1.00 45.03 O
ATOM 6 C5' G B 506 22.062 139.672 67.470 1.00 41.77 C
ATOM 7 C4' G B 506 23.473 139.656 68.000 1.00 40.22 C
ATOM 8 O4' G B 506 24.359 140.250 67.003 1.00 39.47 O
ATOM 9 C3' G B 506 23.691 140.476 69.278 1.00 40.16 C
ATOM 10 O3' G B 506 24.618 139.776 70.101 1.00 40.38 O
ATOM 11 C2' G B 506 24.373 141.725 68.737 1.00 40.11 C
ATOM 12 O2' G B 506 25.164 142.451 69.653 1.00 41.92 O
ATOM 13 C1' G B 506 25.255 141.092 67.674 1.00 39.08 C
ATOM 14 N9 G B 506 25.883 142.040 66.760 1.00 38.37 N
ATOM 15 C8 G B 506 25.386 143.252 66.344 1.00 33.49 C
ATOM 16 N7 G B 506 26.257 143.961 65.685 1.00 34.06 N
ATOM 17 C5 G B 506 27.387 143.156 65.627 1.00 36.58 C
ATOM 18 C6 G B 506 28.675 143.413 65.078 1.00 37.40 C
ATOM 19 O6 G B 506 29.084 144.439 64.524 1.00 38.13 O
ATOM 20 N1 G B 506 29.526 142.322 65.232 1.00 36.75 N
ATOM 21 C2 G B 506 29.184 141.133 65.828 1.00 36.82 C
ATOM 22 N2 G B 506 30.138 140.189 65.847 1.00 36.20 N
ATOM 23 N3 G B 506 27.991 140.886 66.360 1.00 37.64 N
ATOM 24 C4 G B 506 27.152 141.940 66.232 1.00 38.00 C
ATOM 25 P A B 507 24.496 139.845 71.706 1.00 39.46 P
ATOM 26 OP1 A B 507 23.115 140.218 72.085 1.00 36.60 O
ATOM 27 OP2 A B 507 25.634 140.663 72.201 1.00 38.51 O
ATOM 28 O5' A B 507 24.779 138.333 72.134 1.00 38.35 O
TER
Atoms:
OP1: (19.445,126.962,63.684)
OP2: (17.472,128.597,63.674)
C3': (21.558,131.252,65.247)
C1': (21.021,133.051,63.816)
C5': (21.190,129.477,63.435)
O6: (15.604,135.386,64.989)
O4': (21.121,131.866,63.035)
C8: (18.552,132.515,63.763)
C2: (18.904,136.689,65.021)
C6: (16.836,135.399,64.844)
C5: (17.691,134.349,64.413)
C4: (19.051,134.575,64.362)
P: (18.847,128.256,63.258)
C4': (21.771,130.821,63.807)
C2': (21.716,132.761,65.153)
O2': (23.082,133.133,65.101)
N1: (17.551,136.555,65.130)
N2: (19.391,137.914,65.303)
N3: (19.721,135.707,64.652)
N7: (17.392,133.054,64.021)
N9: (19.604,133.373,63.965)
O5': (19.787,129.441,63.761)
O3': (22.514,130.670,66.121)
OP2: (17.472,128.597,63.674)
C3': (21.558,131.252,65.247)
C1': (21.021,133.051,63.816)
C5': (21.190,129.477,63.435)
O6: (15.604,135.386,64.989)
O4': (21.121,131.866,63.035)
C8: (18.552,132.515,63.763)
C2: (18.904,136.689,65.021)
C6: (16.836,135.399,64.844)
C5: (17.691,134.349,64.413)
C4: (19.051,134.575,64.362)
P: (18.847,128.256,63.258)
C4': (21.771,130.821,63.807)
C2': (21.716,132.761,65.153)
O2': (23.082,133.133,65.101)
N1: (17.551,136.555,65.130)
N2: (19.391,137.914,65.303)
N3: (19.721,135.707,64.652)
N7: (17.392,133.054,64.021)
N9: (19.604,133.373,63.965)
O5': (19.787,129.441,63.761)
O3': (22.514,130.670,66.121)
OP1: (19.166,140.688,67.008)
OP2: (20.317,142.846,66.243)
C3': (23.691,140.476,69.278)
C1': (25.255,141.092,67.674)
C5': (22.062,139.672,67.470)
O6: (29.084,144.439,64.524)
O4': (24.359,140.250,67.003)
C8: (25.386,143.252,66.344)
C2: (29.184,141.133,65.828)
C6: (28.675,143.413,65.078)
C5: (27.387,143.156,65.627)
C4: (27.152,141.940,66.232)
P: (20.347,141.373,66.421)
C4': (23.473,139.656,68.000)
C2': (24.373,141.725,68.737)
O2': (25.164,142.451,69.653)
N1: (29.526,142.322,65.232)
N2: (30.138,140.189,65.847)
N3: (27.991,140.886,66.360)
N7: (26.257,143.961,65.685)
N9: (25.883,142.040,66.760)
O5': (21.615,141.029,67.312)
O3': (24.618,139.776,70.101)
OP2: (20.317,142.846,66.243)
C3': (23.691,140.476,69.278)
C1': (25.255,141.092,67.674)
C5': (22.062,139.672,67.470)
O6: (29.084,144.439,64.524)
O4': (24.359,140.250,67.003)
C8: (25.386,143.252,66.344)
C2: (29.184,141.133,65.828)
C6: (28.675,143.413,65.078)
C5: (27.387,143.156,65.627)
C4: (27.152,141.940,66.232)
P: (20.347,141.373,66.421)
C4': (23.473,139.656,68.000)
C2': (24.373,141.725,68.737)
O2': (25.164,142.451,69.653)
N1: (29.526,142.322,65.232)
N2: (30.138,140.189,65.847)
N3: (27.991,140.886,66.360)
N7: (26.257,143.961,65.685)
N9: (25.883,142.040,66.760)
O5': (21.615,141.029,67.312)
O3': (24.618,139.776,70.101)
Image (generated by PyMOL):