ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01278:0506

Extra

PDB:
ATOM 1 O3' A A1277 19.110 128.733 61.689 1.00 36.93 O
ATOM 2 P G A1278 18.988 128.673 63.296 1.00 37.18 P
ATOM 3 OP1 G A1278 19.566 127.376 63.707 1.00 36.84 O
ATOM 4 OP2 G A1278 17.610 129.016 63.683 1.00 38.64 O
ATOM 5 O5' G A1278 19.950 129.836 63.796 1.00 38.56 O
ATOM 6 C5' G A1278 21.345 129.841 63.436 1.00 35.90 C
ATOM 7 C4' G A1278 21.969 131.159 63.818 1.00 37.34 C
ATOM 8 O4' G A1278 21.364 132.220 63.033 1.00 38.20 O
ATOM 9 C3' G A1278 21.735 131.586 65.257 1.00 35.96 C
ATOM 10 O3' G A1278 22.656 130.956 66.135 1.00 37.61 O
ATOM 11 C2' G A1278 21.910 133.097 65.172 1.00 36.43 C
ATOM 12 O2' G A1278 23.270 133.480 65.115 1.00 37.20 O
ATOM 13 C1' G A1278 21.243 133.398 63.824 1.00 36.76 C
ATOM 14 N9 G A1278 19.821 133.699 63.963 1.00 36.11 N
ATOM 15 C8 G A1278 18.787 132.817 63.787 1.00 36.41 C
ATOM 16 N7 G A1278 17.619 133.334 64.056 1.00 38.16 N
ATOM 17 C5 G A1278 17.893 134.645 64.414 1.00 37.13 C
ATOM 18 C6 G A1278 17.020 135.679 64.842 1.00 38.44 C
ATOM 19 O6 G A1278 15.793 135.635 65.008 1.00 34.53 O
ATOM 20 N1 G A1278 17.711 136.857 65.102 1.00 37.42 N
ATOM 21 C2 G A1278 19.061 137.023 64.974 1.00 37.94 C
ATOM 22 N2 G A1278 19.527 138.254 65.258 1.00 39.03 N
ATOM 23 N3 G A1278 19.896 136.058 64.593 1.00 38.67 N
ATOM 24 C4 G A1278 19.245 134.901 64.335 1.00 37.77 C
ATOM 25 P U A1279 22.189 130.521 67.618 1.00 38.18 P
ATOM 26 OP1 U A1279 23.373 129.880 68.229 1.00 40.48 O
ATOM 27 OP2 U A1279 20.899 129.774 67.551 1.00 37.05 O
ATOM 28 O5' U A1279 21.957 131.907 68.359 1.00 36.82 O
TER

ATOM 1 O3' U B 505 20.855 141.080 64.996 1.00 40.00 O
ATOM 2 P G B 506 20.534 141.847 66.372 1.00 38.99 P
ATOM 3 OP1 G B 506 19.329 141.193 66.941 1.00 38.51 O
ATOM 4 OP2 G B 506 20.531 143.305 66.143 1.00 42.18 O
ATOM 5 O5' G B 506 21.784 141.505 67.294 1.00 42.30 O
ATOM 6 C5' G B 506 22.188 140.141 67.495 1.00 38.82 C
ATOM 7 C4' G B 506 23.594 140.087 68.024 1.00 37.92 C
ATOM 8 O4' G B 506 24.500 140.636 67.018 1.00 37.94 O
ATOM 9 C3' G B 506 23.854 140.892 69.303 1.00 37.59 C
ATOM 10 O3' G B 506 24.750 140.143 70.117 1.00 37.77 O
ATOM 11 C2' G B 506 24.595 142.111 68.764 1.00 38.66 C
ATOM 12 O2' G B 506 25.435 142.765 69.690 1.00 36.29 O
ATOM 13 C1' G B 506 25.432 141.454 67.674 1.00 37.07 C
ATOM 14 N9 G B 506 26.052 142.398 66.750 1.00 37.96 N
ATOM 15 C8 G B 506 25.546 143.606 66.327 1.00 34.36 C
ATOM 16 N7 G B 506 26.420 144.324 65.679 1.00 37.15 N
ATOM 17 C5 G B 506 27.557 143.528 65.632 1.00 36.42 C
ATOM 18 C6 G B 506 28.855 143.801 65.113 1.00 37.42 C
ATOM 19 O6 G B 506 29.275 144.841 64.593 1.00 37.56 O
ATOM 20 N1 G B 506 29.708 142.710 65.266 1.00 35.49 N
ATOM 21 C2 G B 506 29.360 141.514 65.843 1.00 35.31 C
ATOM 22 N2 G B 506 30.307 140.573 65.866 1.00 36.32 N
ATOM 23 N3 G B 506 28.166 141.259 66.357 1.00 37.50 N
ATOM 24 C4 G B 506 27.323 142.307 66.226 1.00 36.97 C
ATOM 25 P A B 507 24.622 140.185 71.725 1.00 36.93 P
ATOM 26 OP1 A B 507 23.226 140.485 72.109 1.00 35.70 O
ATOM 27 OP2 A B 507 25.725 141.036 72.247 1.00 36.51 O
ATOM 28 O5' A B 507 24.940 138.677 72.127 1.00 35.93 O
TER

Atoms:
OP1: (19.566,127.376,63.707)
OP2: (17.610,129.016,63.683)
C3': (21.735,131.586,65.257)
C1': (21.243,133.398,63.824)
C5': (21.345,129.841,63.436)
O6: (15.793,135.635,65.008)
O4': (21.364,132.220,63.033)
C8: (18.787,132.817,63.787)
C2: (19.061,137.023,64.974)
C6: (17.020,135.679,64.842)
C5: (17.893,134.645,64.414)
C4: (19.245,134.901,64.335)
P: (18.988,128.673,63.296)
C4': (21.969,131.159,63.818)
C2': (21.910,133.097,65.172)
O2': (23.270,133.480,65.115)
N1: (17.711,136.857,65.102)
N2: (19.527,138.254,65.258)
N3: (19.896,136.058,64.593)
N7: (17.619,133.334,64.056)
N9: (19.821,133.699,63.963)
O5': (19.950,129.836,63.796)
O3': (22.656,130.956,66.135)
OP1: (19.329,141.193,66.941)
OP2: (20.531,143.305,66.143)
C3': (23.854,140.892,69.303)
C1': (25.432,141.454,67.674)
C5': (22.188,140.141,67.495)
O6: (29.275,144.841,64.593)
O4': (24.500,140.636,67.018)
C8: (25.546,143.606,66.327)
C2: (29.360,141.514,65.843)
C6: (28.855,143.801,65.113)
C5: (27.557,143.528,65.632)
C4: (27.323,142.307,66.226)
P: (20.534,141.847,66.372)
C4': (23.594,140.087,68.024)
C2': (24.595,142.111,68.764)
O2': (25.435,142.765,69.690)
N1: (29.708,142.710,65.266)
N2: (30.307,140.573,65.866)
N3: (28.166,141.259,66.357)
N7: (26.420,144.324,65.679)
N9: (26.052,142.398,66.750)
O5': (21.784,141.505,67.294)
O3': (24.750,140.143,70.117)
Image (generated by PyMOL):
PyMOL image
show in jmol