Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -10.882 95.559 94.386 1.00 47.19 O
ATOM 2 P G A 552 -10.647 94.440 95.505 1.00 50.89 P
ATOM 3 OP1 G A 552 -10.481 93.137 94.812 1.00 48.77 O
ATOM 4 OP2 G A 552 -11.707 94.603 96.533 1.00 50.98 O
ATOM 5 O5' G A 552 -9.263 94.842 96.194 1.00 51.80 O
ATOM 6 C5' G A 552 -8.076 95.078 95.411 1.00 49.91 C
ATOM 7 C4' G A 552 -7.037 95.801 96.238 1.00 48.13 C
ATOM 8 O4' G A 552 -7.535 97.106 96.635 1.00 49.80 O
ATOM 9 C3' G A 552 -6.656 95.139 97.549 1.00 48.46 C
ATOM 10 O3' G A 552 -5.708 94.110 97.308 1.00 47.79 O
ATOM 11 C2' G A 552 -6.085 96.309 98.344 1.00 49.13 C
ATOM 12 O2' G A 552 -4.755 96.633 98.007 1.00 51.40 O
ATOM 13 C1' G A 552 -6.998 97.456 97.902 1.00 49.63 C
ATOM 14 N9 G A 552 -8.098 97.678 98.837 1.00 51.39 N
ATOM 15 C8 G A 552 -9.250 96.937 98.945 1.00 51.44 C
ATOM 16 N7 G A 552 -10.028 97.337 99.914 1.00 53.03 N
ATOM 17 C5 G A 552 -9.357 98.416 100.474 1.00 53.15 C
ATOM 18 C6 G A 552 -9.710 99.249 101.570 1.00 53.68 C
ATOM 19 O6 G A 552 -10.716 99.196 102.286 1.00 55.06 O
ATOM 20 N1 G A 552 -8.744 100.222 101.806 1.00 54.36 N
ATOM 21 C2 G A 552 -7.588 100.375 101.088 1.00 53.23 C
ATOM 22 N2 G A 552 -6.782 101.367 101.487 1.00 54.60 N
ATOM 23 N3 G A 552 -7.246 99.609 100.061 1.00 52.39 N
ATOM 24 C4 G A 552 -8.170 98.653 99.813 1.00 52.27 C
ATOM 25 P A A 553 -5.293 93.090 98.483 1.00 50.60 P
ATOM 26 OP1 A A 553 -5.928 91.784 98.167 1.00 48.56 O
ATOM 27 OP2 A A 553 -5.505 93.709 99.812 1.00 45.93 O
ATOM 28 O5' A A 553 -3.721 92.922 98.259 1.00 50.02 O
TER
ATOM 1 O3' A B 579 -6.442 102.959 106.244 1.00 53.09 O
ATOM 2 P G B 580 -6.336 103.303 104.676 1.00 49.39 P
ATOM 3 OP1 G B 580 -6.078 104.756 104.568 1.00 51.94 O
ATOM 4 OP2 G B 580 -7.506 102.709 103.982 1.00 52.46 O
ATOM 5 O5' G B 580 -5.054 102.492 104.189 1.00 50.98 O
ATOM 6 C5' G B 580 -3.722 102.858 104.609 1.00 47.04 C
ATOM 7 C4' G B 580 -2.719 101.915 103.991 1.00 46.79 C
ATOM 8 O4' G B 580 -2.950 100.573 104.495 1.00 44.69 O
ATOM 9 C3' G B 580 -2.831 101.783 102.480 1.00 46.49 C
ATOM 10 O3' G B 580 -2.031 102.754 101.824 1.00 50.00 O
ATOM 11 C2' G B 580 -2.241 100.400 102.226 1.00 46.00 C
ATOM 12 O2' G B 580 -0.832 100.412 102.166 1.00 46.89 O
ATOM 13 C1' G B 580 -2.701 99.626 103.467 1.00 44.18 C
ATOM 14 N9 G B 580 -3.927 98.875 103.217 1.00 42.92 N
ATOM 15 C8 G B 580 -5.215 99.306 103.423 1.00 43.01 C
ATOM 16 N7 G B 580 -6.111 98.446 103.030 1.00 44.33 N
ATOM 17 C5 G B 580 -5.375 97.374 102.555 1.00 42.61 C
ATOM 18 C6 G B 580 -5.806 96.153 101.993 1.00 42.63 C
ATOM 19 O6 G B 580 -6.962 95.766 101.791 1.00 45.64 O
ATOM 20 N1 G B 580 -4.729 95.341 101.648 1.00 42.00 N
ATOM 21 C2 G B 580 -3.404 95.667 101.831 1.00 42.75 C
ATOM 22 N2 G B 580 -2.504 94.745 101.450 1.00 40.66 N
ATOM 23 N3 G B 580 -2.992 96.810 102.354 1.00 41.68 N
ATOM 24 C4 G B 580 -4.023 97.612 102.686 1.00 42.31 C
ATOM 25 P A B 581 -2.642 104.186 101.415 1.00 54.06 P
ATOM 26 OP1 A B 581 -2.477 105.098 102.584 1.00 52.56 O
ATOM 27 OP2 A B 581 -3.972 104.049 100.781 1.00 52.58 O
ATOM 28 O5' A B 581 -1.623 104.671 100.293 1.00 55.02 O
TER
ATOM 2 P G A 552 -10.647 94.440 95.505 1.00 50.89 P
ATOM 3 OP1 G A 552 -10.481 93.137 94.812 1.00 48.77 O
ATOM 4 OP2 G A 552 -11.707 94.603 96.533 1.00 50.98 O
ATOM 5 O5' G A 552 -9.263 94.842 96.194 1.00 51.80 O
ATOM 6 C5' G A 552 -8.076 95.078 95.411 1.00 49.91 C
ATOM 7 C4' G A 552 -7.037 95.801 96.238 1.00 48.13 C
ATOM 8 O4' G A 552 -7.535 97.106 96.635 1.00 49.80 O
ATOM 9 C3' G A 552 -6.656 95.139 97.549 1.00 48.46 C
ATOM 10 O3' G A 552 -5.708 94.110 97.308 1.00 47.79 O
ATOM 11 C2' G A 552 -6.085 96.309 98.344 1.00 49.13 C
ATOM 12 O2' G A 552 -4.755 96.633 98.007 1.00 51.40 O
ATOM 13 C1' G A 552 -6.998 97.456 97.902 1.00 49.63 C
ATOM 14 N9 G A 552 -8.098 97.678 98.837 1.00 51.39 N
ATOM 15 C8 G A 552 -9.250 96.937 98.945 1.00 51.44 C
ATOM 16 N7 G A 552 -10.028 97.337 99.914 1.00 53.03 N
ATOM 17 C5 G A 552 -9.357 98.416 100.474 1.00 53.15 C
ATOM 18 C6 G A 552 -9.710 99.249 101.570 1.00 53.68 C
ATOM 19 O6 G A 552 -10.716 99.196 102.286 1.00 55.06 O
ATOM 20 N1 G A 552 -8.744 100.222 101.806 1.00 54.36 N
ATOM 21 C2 G A 552 -7.588 100.375 101.088 1.00 53.23 C
ATOM 22 N2 G A 552 -6.782 101.367 101.487 1.00 54.60 N
ATOM 23 N3 G A 552 -7.246 99.609 100.061 1.00 52.39 N
ATOM 24 C4 G A 552 -8.170 98.653 99.813 1.00 52.27 C
ATOM 25 P A A 553 -5.293 93.090 98.483 1.00 50.60 P
ATOM 26 OP1 A A 553 -5.928 91.784 98.167 1.00 48.56 O
ATOM 27 OP2 A A 553 -5.505 93.709 99.812 1.00 45.93 O
ATOM 28 O5' A A 553 -3.721 92.922 98.259 1.00 50.02 O
TER
ATOM 1 O3' A B 579 -6.442 102.959 106.244 1.00 53.09 O
ATOM 2 P G B 580 -6.336 103.303 104.676 1.00 49.39 P
ATOM 3 OP1 G B 580 -6.078 104.756 104.568 1.00 51.94 O
ATOM 4 OP2 G B 580 -7.506 102.709 103.982 1.00 52.46 O
ATOM 5 O5' G B 580 -5.054 102.492 104.189 1.00 50.98 O
ATOM 6 C5' G B 580 -3.722 102.858 104.609 1.00 47.04 C
ATOM 7 C4' G B 580 -2.719 101.915 103.991 1.00 46.79 C
ATOM 8 O4' G B 580 -2.950 100.573 104.495 1.00 44.69 O
ATOM 9 C3' G B 580 -2.831 101.783 102.480 1.00 46.49 C
ATOM 10 O3' G B 580 -2.031 102.754 101.824 1.00 50.00 O
ATOM 11 C2' G B 580 -2.241 100.400 102.226 1.00 46.00 C
ATOM 12 O2' G B 580 -0.832 100.412 102.166 1.00 46.89 O
ATOM 13 C1' G B 580 -2.701 99.626 103.467 1.00 44.18 C
ATOM 14 N9 G B 580 -3.927 98.875 103.217 1.00 42.92 N
ATOM 15 C8 G B 580 -5.215 99.306 103.423 1.00 43.01 C
ATOM 16 N7 G B 580 -6.111 98.446 103.030 1.00 44.33 N
ATOM 17 C5 G B 580 -5.375 97.374 102.555 1.00 42.61 C
ATOM 18 C6 G B 580 -5.806 96.153 101.993 1.00 42.63 C
ATOM 19 O6 G B 580 -6.962 95.766 101.791 1.00 45.64 O
ATOM 20 N1 G B 580 -4.729 95.341 101.648 1.00 42.00 N
ATOM 21 C2 G B 580 -3.404 95.667 101.831 1.00 42.75 C
ATOM 22 N2 G B 580 -2.504 94.745 101.450 1.00 40.66 N
ATOM 23 N3 G B 580 -2.992 96.810 102.354 1.00 41.68 N
ATOM 24 C4 G B 580 -4.023 97.612 102.686 1.00 42.31 C
ATOM 25 P A B 581 -2.642 104.186 101.415 1.00 54.06 P
ATOM 26 OP1 A B 581 -2.477 105.098 102.584 1.00 52.56 O
ATOM 27 OP2 A B 581 -3.972 104.049 100.781 1.00 52.58 O
ATOM 28 O5' A B 581 -1.623 104.671 100.293 1.00 55.02 O
TER
Atoms:
OP1: (-10.481,93.137,94.812)
OP2: (-11.707,94.603,96.533)
C3': (-6.656,95.139,97.549)
C1': (-6.998,97.456,97.902)
C5': (-8.076,95.078,95.411)
O6: (-10.716,99.196,102.286)
O4': (-7.535,97.106,96.635)
C8: (-9.250,96.937,98.945)
C2: (-7.588,100.375,101.088)
C6: (-9.710,99.249,101.570)
C5: (-9.357,98.416,100.474)
C4: (-8.170,98.653,99.813)
P: (-10.647,94.440,95.505)
C4': (-7.037,95.801,96.238)
C2': (-6.085,96.309,98.344)
O2': (-4.755,96.633,98.007)
N1: (-8.744,100.222,101.806)
N2: (-6.782,101.367,101.487)
N3: (-7.246,99.609,100.061)
N7: (-10.028,97.337,99.914)
N9: (-8.098,97.678,98.837)
O5': (-9.263,94.842,96.194)
O3': (-5.708,94.110,97.308)
OP2: (-11.707,94.603,96.533)
C3': (-6.656,95.139,97.549)
C1': (-6.998,97.456,97.902)
C5': (-8.076,95.078,95.411)
O6: (-10.716,99.196,102.286)
O4': (-7.535,97.106,96.635)
C8: (-9.250,96.937,98.945)
C2: (-7.588,100.375,101.088)
C6: (-9.710,99.249,101.570)
C5: (-9.357,98.416,100.474)
C4: (-8.170,98.653,99.813)
P: (-10.647,94.440,95.505)
C4': (-7.037,95.801,96.238)
C2': (-6.085,96.309,98.344)
O2': (-4.755,96.633,98.007)
N1: (-8.744,100.222,101.806)
N2: (-6.782,101.367,101.487)
N3: (-7.246,99.609,100.061)
N7: (-10.028,97.337,99.914)
N9: (-8.098,97.678,98.837)
O5': (-9.263,94.842,96.194)
O3': (-5.708,94.110,97.308)
OP1: (-6.078,104.756,104.568)
OP2: (-7.506,102.709,103.982)
C3': (-2.831,101.783,102.480)
C1': (-2.701,99.626,103.467)
C5': (-3.722,102.858,104.609)
O6: (-6.962,95.766,101.791)
O4': (-2.950,100.573,104.495)
C8: (-5.215,99.306,103.423)
C2: (-3.404,95.667,101.831)
C6: (-5.806,96.153,101.993)
C5: (-5.375,97.374,102.555)
C4: (-4.023,97.612,102.686)
P: (-6.336,103.303,104.676)
C4': (-2.719,101.915,103.991)
C2': (-2.241,100.400,102.226)
O2': (-0.832,100.412,102.166)
N1: (-4.729,95.341,101.648)
N2: (-2.504,94.745,101.450)
N3: (-2.992,96.810,102.354)
N7: (-6.111,98.446,103.030)
N9: (-3.927,98.875,103.217)
O5': (-5.054,102.492,104.189)
O3': (-2.031,102.754,101.824)
OP2: (-7.506,102.709,103.982)
C3': (-2.831,101.783,102.480)
C1': (-2.701,99.626,103.467)
C5': (-3.722,102.858,104.609)
O6: (-6.962,95.766,101.791)
O4': (-2.950,100.573,104.495)
C8: (-5.215,99.306,103.423)
C2: (-3.404,95.667,101.831)
C6: (-5.806,96.153,101.993)
C5: (-5.375,97.374,102.555)
C4: (-4.023,97.612,102.686)
P: (-6.336,103.303,104.676)
C4': (-2.719,101.915,103.991)
C2': (-2.241,100.400,102.226)
O2': (-0.832,100.412,102.166)
N1: (-4.729,95.341,101.648)
N2: (-2.504,94.745,101.450)
N3: (-2.992,96.810,102.354)
N7: (-6.111,98.446,103.030)
N9: (-3.927,98.875,103.217)
O5': (-5.054,102.492,104.189)
O3': (-2.031,102.754,101.824)
Image (generated by PyMOL):