Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0552:0580
Extra
PDB:
ATOM 1 O3' C A 551 -11.016 94.934 94.306 1.00 48.90 O
ATOM 2 P G A 552 -10.793 93.809 95.420 1.00 52.24 P
ATOM 3 OP1 G A 552 -10.624 92.508 94.723 1.00 51.82 O
ATOM 4 OP2 G A 552 -11.857 93.967 96.446 1.00 53.68 O
ATOM 5 O5' G A 552 -9.412 94.202 96.111 1.00 54.28 O
ATOM 6 C5' G A 552 -8.224 94.422 95.332 1.00 52.05 C
ATOM 7 C4' G A 552 -7.195 95.164 96.149 1.00 51.11 C
ATOM 8 O4' G A 552 -7.706 96.466 96.541 1.00 52.29 O
ATOM 9 C3' G A 552 -6.802 94.518 97.466 1.00 50.58 C
ATOM 10 O3' G A 552 -5.858 93.488 97.221 1.00 49.26 O
ATOM 11 C2' G A 552 -6.212 95.699 98.225 1.00 51.79 C
ATOM 12 O2' G A 552 -4.898 96.011 97.818 1.00 54.18 O
ATOM 13 C1' G A 552 -7.144 96.836 97.793 1.00 52.82 C
ATOM 14 N9 G A 552 -8.225 97.070 98.748 1.00 55.15 N
ATOM 15 C8 G A 552 -9.377 96.331 98.894 1.00 55.19 C
ATOM 16 N7 G A 552 -10.145 96.764 99.858 1.00 56.53 N
ATOM 17 C5 G A 552 -9.467 97.860 100.376 1.00 57.23 C
ATOM 18 C6 G A 552 -9.810 98.737 101.446 1.00 58.24 C
ATOM 19 O6 G A 552 -10.816 98.721 102.170 1.00 60.38 O
ATOM 20 N1 G A 552 -8.836 99.708 101.641 1.00 59.13 N
ATOM 21 C2 G A 552 -7.682 99.829 100.911 1.00 58.39 C
ATOM 22 N2 G A 552 -6.871 100.836 101.266 1.00 58.08 N
ATOM 23 N3 G A 552 -7.349 99.022 99.912 1.00 57.32 N
ATOM 24 C4 G A 552 -8.281 98.067 99.701 1.00 56.30 C
ATOM 25 P A A 553 -5.378 92.518 98.413 1.00 50.69 P
ATOM 26 OP1 A A 553 -5.953 91.178 98.143 1.00 47.80 O
ATOM 27 OP2 A A 553 -5.591 93.164 99.733 1.00 44.54 O
ATOM 28 O5' A A 553 -3.808 92.396 98.156 1.00 50.47 O
TER
ATOM 1 O3' A B 579 -6.536 102.348 106.196 1.00 55.94 O
ATOM 2 P G B 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G B 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G B 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G B 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G B 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G B 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G B 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G B 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G B 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G B 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G B 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G B 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G B 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G B 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G B 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G B 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G B 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G B 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G B 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G B 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G B 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G B 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G B 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A B 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A B 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A B 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A B 581 -1.743 104.063 100.261 1.00 55.02 O
TER
ATOM 2 P G A 552 -10.793 93.809 95.420 1.00 52.24 P
ATOM 3 OP1 G A 552 -10.624 92.508 94.723 1.00 51.82 O
ATOM 4 OP2 G A 552 -11.857 93.967 96.446 1.00 53.68 O
ATOM 5 O5' G A 552 -9.412 94.202 96.111 1.00 54.28 O
ATOM 6 C5' G A 552 -8.224 94.422 95.332 1.00 52.05 C
ATOM 7 C4' G A 552 -7.195 95.164 96.149 1.00 51.11 C
ATOM 8 O4' G A 552 -7.706 96.466 96.541 1.00 52.29 O
ATOM 9 C3' G A 552 -6.802 94.518 97.466 1.00 50.58 C
ATOM 10 O3' G A 552 -5.858 93.488 97.221 1.00 49.26 O
ATOM 11 C2' G A 552 -6.212 95.699 98.225 1.00 51.79 C
ATOM 12 O2' G A 552 -4.898 96.011 97.818 1.00 54.18 O
ATOM 13 C1' G A 552 -7.144 96.836 97.793 1.00 52.82 C
ATOM 14 N9 G A 552 -8.225 97.070 98.748 1.00 55.15 N
ATOM 15 C8 G A 552 -9.377 96.331 98.894 1.00 55.19 C
ATOM 16 N7 G A 552 -10.145 96.764 99.858 1.00 56.53 N
ATOM 17 C5 G A 552 -9.467 97.860 100.376 1.00 57.23 C
ATOM 18 C6 G A 552 -9.810 98.737 101.446 1.00 58.24 C
ATOM 19 O6 G A 552 -10.816 98.721 102.170 1.00 60.38 O
ATOM 20 N1 G A 552 -8.836 99.708 101.641 1.00 59.13 N
ATOM 21 C2 G A 552 -7.682 99.829 100.911 1.00 58.39 C
ATOM 22 N2 G A 552 -6.871 100.836 101.266 1.00 58.08 N
ATOM 23 N3 G A 552 -7.349 99.022 99.912 1.00 57.32 N
ATOM 24 C4 G A 552 -8.281 98.067 99.701 1.00 56.30 C
ATOM 25 P A A 553 -5.378 92.518 98.413 1.00 50.69 P
ATOM 26 OP1 A A 553 -5.953 91.178 98.143 1.00 47.80 O
ATOM 27 OP2 A A 553 -5.591 93.164 99.733 1.00 44.54 O
ATOM 28 O5' A A 553 -3.808 92.396 98.156 1.00 50.47 O
TER
ATOM 1 O3' A B 579 -6.536 102.348 106.196 1.00 55.94 O
ATOM 2 P G B 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G B 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G B 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G B 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G B 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G B 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G B 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G B 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G B 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G B 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G B 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G B 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G B 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G B 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G B 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G B 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G B 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G B 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G B 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G B 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G B 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G B 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G B 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A B 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A B 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A B 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A B 581 -1.743 104.063 100.261 1.00 55.02 O
TER
Atoms:
OP1: (-10.624,92.508,94.723)
OP2: (-11.857,93.967,96.446)
C3': (-6.802,94.518,97.466)
C1': (-7.144,96.836,97.793)
C5': (-8.224,94.422,95.332)
O6: (-10.816,98.721,102.170)
O4': (-7.706,96.466,96.541)
C8: (-9.377,96.331,98.894)
C2: (-7.682,99.829,100.911)
C6: (-9.810,98.737,101.446)
C5: (-9.467,97.860,100.376)
C4: (-8.281,98.067,99.701)
P: (-10.793,93.809,95.420)
C4': (-7.195,95.164,96.149)
C2': (-6.212,95.699,98.225)
O2': (-4.898,96.011,97.818)
N1: (-8.836,99.708,101.641)
N2: (-6.871,100.836,101.266)
N3: (-7.349,99.022,99.912)
N7: (-10.145,96.764,99.858)
N9: (-8.225,97.070,98.748)
O5': (-9.412,94.202,96.111)
O3': (-5.858,93.488,97.221)
OP2: (-11.857,93.967,96.446)
C3': (-6.802,94.518,97.466)
C1': (-7.144,96.836,97.793)
C5': (-8.224,94.422,95.332)
O6: (-10.816,98.721,102.170)
O4': (-7.706,96.466,96.541)
C8: (-9.377,96.331,98.894)
C2: (-7.682,99.829,100.911)
C6: (-9.810,98.737,101.446)
C5: (-9.467,97.860,100.376)
C4: (-8.281,98.067,99.701)
P: (-10.793,93.809,95.420)
C4': (-7.195,95.164,96.149)
C2': (-6.212,95.699,98.225)
O2': (-4.898,96.011,97.818)
N1: (-8.836,99.708,101.641)
N2: (-6.871,100.836,101.266)
N3: (-7.349,99.022,99.912)
N7: (-10.145,96.764,99.858)
N9: (-8.225,97.070,98.748)
O5': (-9.412,94.202,96.111)
O3': (-5.858,93.488,97.221)
OP1: (-6.280,104.147,104.517)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
Image (generated by PyMOL):