ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A611:A114

Extra

PDB:
ATOM 1 O3' A A 610 125.652 99.256 -12.749 1.00110.62 O
ATOM 2 P G A 611 124.831 98.844 -14.067 1.00 71.29 P
ATOM 3 OP1 G A 611 125.575 99.380 -15.252 1.00 66.02 O
ATOM 4 OP2 G A 611 123.401 99.218 -13.879 1.00 66.02 O
ATOM 5 O5' G A 611 124.899 97.248 -14.070 1.00 71.29 O
ATOM 6 C5' G A 611 126.136 96.544 -14.316 1.00 71.29 C
ATOM 7 C4' G A 611 125.888 95.052 -14.411 1.00 71.29 C
ATOM 8 O4' G A 611 125.637 94.493 -13.095 1.00 71.29 O
ATOM 9 C3' G A 611 124.676 94.658 -15.230 1.00 71.29 C
ATOM 10 O3' G A 611 124.938 94.618 -16.611 1.00 71.29 O
ATOM 11 C2' G A 611 124.313 93.298 -14.662 1.00 71.29 C
ATOM 12 O2' G A 611 125.107 92.258 -15.194 1.00 71.29 O
ATOM 13 C1' G A 611 124.625 93.501 -13.179 1.00 71.29 C
ATOM 14 N9 G A 611 123.453 93.990 -12.451 1.00 66.02 N
ATOM 15 C8 G A 611 123.074 95.302 -12.289 1.00 66.02 C
ATOM 16 N7 G A 611 121.979 95.440 -11.598 1.00 66.02 N
ATOM 17 C5 G A 611 121.610 94.143 -11.280 1.00 66.02 C
ATOM 18 C6 G A 611 120.508 93.665 -10.537 1.00 66.02 C
ATOM 19 O6 G A 611 119.607 94.315 -9.991 1.00 66.02 O
ATOM 20 N1 G A 611 120.510 92.280 -10.456 1.00 66.02 N
ATOM 21 C2 G A 611 121.449 91.459 -11.017 1.00 66.02 C
ATOM 22 N2 G A 611 121.273 90.147 -10.821 1.00 66.02 N
ATOM 23 N3 G A 611 122.484 91.890 -11.716 1.00 66.02 N
ATOM 24 C4 G A 611 122.504 93.234 -11.804 1.00 66.02 C
ATOM 25 P C A 612 123.756 94.970 -17.635 1.00 49.62 P
ATOM 26 OP1 C A 612 124.313 94.917 -19.013 1.00 68.78 O
ATOM 27 OP2 C A 612 123.095 96.221 -17.159 1.00 68.78 O
ATOM 28 O5' C A 612 122.722 93.768 -17.450 1.00 49.62 O
TER

ATOM 1 O3' U B 113 121.607 87.251 -10.892 1.00 39.39 O
ATOM 2 P G B 114 120.095 86.794 -10.607 1.00 38.70 P
ATOM 3 OP1 G B 114 119.542 87.879 -9.764 1.00 34.29 O
ATOM 4 OP2 G B 114 120.054 85.386 -10.111 1.00 34.29 O
ATOM 5 O5' G B 114 119.400 86.817 -12.037 1.00 38.70 O
ATOM 6 C5' G B 114 119.325 88.027 -12.774 1.00 38.70 C
ATOM 7 C4' G B 114 118.933 87.752 -14.198 1.00 38.70 C
ATOM 8 O4' G B 114 119.972 87.012 -14.883 1.00 38.70 O
ATOM 9 C3' G B 114 117.682 86.932 -14.428 1.00 38.70 C
ATOM 10 O3' G B 114 116.515 87.741 -14.272 1.00 38.70 O
ATOM 11 C2' G B 114 117.884 86.453 -15.861 1.00 38.70 C
ATOM 12 O2' G B 114 117.575 87.462 -16.793 1.00 38.70 O
ATOM 13 C1' G B 114 119.397 86.247 -15.925 1.00 38.70 C
ATOM 14 N9 G B 114 119.816 84.853 -15.789 1.00 34.29 N
ATOM 15 C8 G B 114 120.213 84.215 -14.640 1.00 34.29 C
ATOM 16 N7 G B 114 120.518 82.959 -14.830 1.00 34.29 N
ATOM 17 C5 G B 114 120.315 82.752 -16.186 1.00 34.29 C
ATOM 18 C6 G B 114 120.481 81.576 -16.972 1.00 34.29 C
ATOM 19 O6 G B 114 120.868 80.452 -16.612 1.00 34.29 O
ATOM 20 N1 G B 114 120.150 81.802 -18.302 1.00 34.29 N
ATOM 21 C2 G B 114 119.725 83.003 -18.811 1.00 34.29 C
ATOM 22 N2 G B 114 119.440 83.015 -20.110 1.00 34.29 N
ATOM 23 N3 G B 114 119.582 84.110 -18.094 1.00 34.29 N
ATOM 24 C4 G B 114 119.887 83.911 -16.798 1.00 34.29 C
ATOM 25 P G B 115 115.061 87.048 -14.166 1.00 42.84 P
ATOM 26 OP1 G B 115 114.105 88.162 -13.894 1.00 38.17 O
ATOM 27 OP2 G B 115 115.109 85.888 -13.224 1.00 38.17 O
ATOM 28 O5' G B 115 114.833 86.539 -15.658 1.00 42.84 O
TER

Atoms:
OP1: (125.575,99.380,-15.252)
OP2: (123.401,99.218,-13.879)
C3': (124.676,94.658,-15.230)
C1': (124.625,93.501,-13.179)
C5': (126.136,96.544,-14.316)
O6: (119.607,94.315,-9.991)
O4': (125.637,94.493,-13.095)
C8: (123.074,95.302,-12.289)
C2: (121.449,91.459,-11.017)
C6: (120.508,93.665,-10.537)
C5: (121.610,94.143,-11.280)
C4: (122.504,93.234,-11.804)
P: (124.831,98.844,-14.067)
C4': (125.888,95.052,-14.411)
C2': (124.313,93.298,-14.662)
O2': (125.107,92.258,-15.194)
N1: (120.510,92.280,-10.456)
N2: (121.273,90.147,-10.821)
N3: (122.484,91.890,-11.716)
N7: (121.979,95.440,-11.598)
N9: (123.453,93.990,-12.451)
O5': (124.899,97.248,-14.070)
O3': (124.938,94.618,-16.611)
OP1: (119.542,87.879,-9.764)
OP2: (120.054,85.386,-10.111)
C3': (117.682,86.932,-14.428)
C1': (119.397,86.247,-15.925)
C5': (119.325,88.027,-12.774)
O6: (120.868,80.452,-16.612)
O4': (119.972,87.012,-14.883)
C8: (120.213,84.215,-14.640)
C2: (119.725,83.003,-18.811)
C6: (120.481,81.576,-16.972)
C5: (120.315,82.752,-16.186)
C4: (119.887,83.911,-16.798)
P: (120.095,86.794,-10.607)
C4': (118.933,87.752,-14.198)
C2': (117.884,86.453,-15.861)
O2': (117.575,87.462,-16.793)
N1: (120.150,81.802,-18.302)
N2: (119.440,83.015,-20.110)
N3: (119.582,84.110,-18.094)
N7: (120.518,82.959,-14.830)
N9: (119.816,84.853,-15.789)
O5': (119.400,86.817,-12.037)
O3': (116.515,87.741,-14.272)
Image (generated by PyMOL):
PyMOL image
show in jmol