Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YFG:A55:A17
Extra
PDB:
ATOM 1 O3' C A 54 15.733 16.358 -40.402 1.00 16.51 O
ATOM 2 P G A 55 15.415 16.004 -38.832 1.00 15.74 P
ATOM 3 OP1 G A 55 16.552 16.851 -38.313 1.00 15.89 O
ATOM 4 OP2 G A 55 15.511 14.556 -38.777 1.00 15.74 O
ATOM 5 O5' G A 55 13.976 16.703 -38.818 1.00 15.08 O
ATOM 6 C5' G A 55 14.249 18.141 -38.709 1.00 14.41 C
ATOM 7 C4' G A 55 13.015 18.781 -39.255 1.00 14.19 C
ATOM 8 O4' G A 55 12.526 17.954 -40.307 1.00 13.87 O
ATOM 9 C3' G A 55 11.833 18.958 -38.340 1.00 14.46 C
ATOM 10 O3' G A 55 11.941 20.051 -37.426 1.00 15.25 O
ATOM 11 C2' G A 55 10.701 19.145 -39.351 1.00 14.03 C
ATOM 12 O2' G A 55 10.781 20.485 -39.788 1.00 14.17 O
ATOM 13 C1' G A 55 11.122 18.220 -40.457 1.00 13.39 C
ATOM 14 N9 G A 55 10.343 16.989 -40.402 1.00 12.79 N
ATOM 15 C8 G A 55 10.781 15.718 -40.143 1.00 12.72 C
ATOM 16 N7 G A 55 9.825 14.812 -40.156 1.00 12.41 N
ATOM 17 C5 G A 55 8.694 15.570 -40.443 1.00 12.22 C
ATOM 18 C6 G A 55 7.346 15.186 -40.580 1.00 12.35 C
ATOM 19 O6 G A 55 6.914 14.024 -40.484 1.00 13.00 O
ATOM 20 N1 G A 55 6.505 16.211 -40.853 1.00 11.79 N
ATOM 21 C2 G A 55 6.914 17.491 -40.976 1.00 11.93 C
ATOM 22 N2 G A 55 5.936 18.377 -41.249 1.00 12.15 N
ATOM 23 N3 G A 55 8.165 17.904 -40.853 1.00 12.12 N
ATOM 24 C4 G A 55 9.001 16.890 -40.580 1.00 12.23 C
TER
ATOM 1 O3' G B 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 2 P G B 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 3 OP1 G B 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 4 OP2 G B 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 5 O5' G B 17 2.320 20.662 -41.658 1.00 26.62 O
ATOM 6 C5' G B 17 3.457 21.056 -40.866 1.00 27.82 C
ATOM 7 C4' G B 17 4.276 22.080 -41.686 1.00 28.88 C
ATOM 8 O4' G B 17 5.240 21.284 -42.349 1.00 28.61 O
ATOM 9 C3' G B 17 3.457 22.789 -42.737 1.00 30.09 C
ATOM 10 O3' G B 17 3.986 24.106 -42.941 1.00 32.68 O
ATOM 11 C2' G B 17 3.639 21.843 -43.921 1.00 29.34 C
ATOM 12 O2' G B 17 3.514 22.550 -45.141 1.00 29.72 O
ATOM 13 C1' G B 17 5.112 21.420 -43.747 1.00 28.04 C
ATOM 14 N9 G B 17 5.186 19.953 -44.020 1.00 27.00 N
ATOM 15 C8 G B 17 4.147 19.086 -44.281 1.00 26.68 C
ATOM 16 N7 G B 17 4.513 17.847 -44.473 1.00 26.55 N
ATOM 17 C5 G B 17 5.893 17.893 -44.331 1.00 26.42 C
ATOM 18 C6 G B 17 6.828 16.851 -44.428 1.00 26.47 C
ATOM 19 O6 G B 17 6.641 15.679 -44.649 1.00 26.65 O
ATOM 20 N1 G B 17 8.124 17.302 -44.228 1.00 26.29 N
ATOM 21 C2 G B 17 8.462 18.615 -43.966 1.00 26.24 C
ATOM 22 N2 G B 17 9.751 18.820 -43.816 1.00 26.26 N
ATOM 23 N3 G B 17 7.585 19.598 -43.870 1.00 26.33 N
ATOM 24 C4 G B 17 6.313 19.156 -44.064 1.00 26.43 C
ATOM 25 P A B 18 3.338 25.414 -42.286 1.00 35.16 P
ATOM 26 OP1 A B 18 2.015 25.668 -42.910 1.00 35.16 O
ATOM 27 OP2 A B 18 4.343 26.505 -42.358 1.00 35.07 O
ATOM 28 O5' A B 18 3.128 24.979 -40.757 1.00 36.64 O
TER
ATOM 2 P G A 55 15.415 16.004 -38.832 1.00 15.74 P
ATOM 3 OP1 G A 55 16.552 16.851 -38.313 1.00 15.89 O
ATOM 4 OP2 G A 55 15.511 14.556 -38.777 1.00 15.74 O
ATOM 5 O5' G A 55 13.976 16.703 -38.818 1.00 15.08 O
ATOM 6 C5' G A 55 14.249 18.141 -38.709 1.00 14.41 C
ATOM 7 C4' G A 55 13.015 18.781 -39.255 1.00 14.19 C
ATOM 8 O4' G A 55 12.526 17.954 -40.307 1.00 13.87 O
ATOM 9 C3' G A 55 11.833 18.958 -38.340 1.00 14.46 C
ATOM 10 O3' G A 55 11.941 20.051 -37.426 1.00 15.25 O
ATOM 11 C2' G A 55 10.701 19.145 -39.351 1.00 14.03 C
ATOM 12 O2' G A 55 10.781 20.485 -39.788 1.00 14.17 O
ATOM 13 C1' G A 55 11.122 18.220 -40.457 1.00 13.39 C
ATOM 14 N9 G A 55 10.343 16.989 -40.402 1.00 12.79 N
ATOM 15 C8 G A 55 10.781 15.718 -40.143 1.00 12.72 C
ATOM 16 N7 G A 55 9.825 14.812 -40.156 1.00 12.41 N
ATOM 17 C5 G A 55 8.694 15.570 -40.443 1.00 12.22 C
ATOM 18 C6 G A 55 7.346 15.186 -40.580 1.00 12.35 C
ATOM 19 O6 G A 55 6.914 14.024 -40.484 1.00 13.00 O
ATOM 20 N1 G A 55 6.505 16.211 -40.853 1.00 11.79 N
ATOM 21 C2 G A 55 6.914 17.491 -40.976 1.00 11.93 C
ATOM 22 N2 G A 55 5.936 18.377 -41.249 1.00 12.15 N
ATOM 23 N3 G A 55 8.165 17.904 -40.853 1.00 12.12 N
ATOM 24 C4 G A 55 9.001 16.890 -40.580 1.00 12.23 C
TER
ATOM 1 O3' G B 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 2 P G B 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 3 OP1 G B 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 4 OP2 G B 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 5 O5' G B 17 2.320 20.662 -41.658 1.00 26.62 O
ATOM 6 C5' G B 17 3.457 21.056 -40.866 1.00 27.82 C
ATOM 7 C4' G B 17 4.276 22.080 -41.686 1.00 28.88 C
ATOM 8 O4' G B 17 5.240 21.284 -42.349 1.00 28.61 O
ATOM 9 C3' G B 17 3.457 22.789 -42.737 1.00 30.09 C
ATOM 10 O3' G B 17 3.986 24.106 -42.941 1.00 32.68 O
ATOM 11 C2' G B 17 3.639 21.843 -43.921 1.00 29.34 C
ATOM 12 O2' G B 17 3.514 22.550 -45.141 1.00 29.72 O
ATOM 13 C1' G B 17 5.112 21.420 -43.747 1.00 28.04 C
ATOM 14 N9 G B 17 5.186 19.953 -44.020 1.00 27.00 N
ATOM 15 C8 G B 17 4.147 19.086 -44.281 1.00 26.68 C
ATOM 16 N7 G B 17 4.513 17.847 -44.473 1.00 26.55 N
ATOM 17 C5 G B 17 5.893 17.893 -44.331 1.00 26.42 C
ATOM 18 C6 G B 17 6.828 16.851 -44.428 1.00 26.47 C
ATOM 19 O6 G B 17 6.641 15.679 -44.649 1.00 26.65 O
ATOM 20 N1 G B 17 8.124 17.302 -44.228 1.00 26.29 N
ATOM 21 C2 G B 17 8.462 18.615 -43.966 1.00 26.24 C
ATOM 22 N2 G B 17 9.751 18.820 -43.816 1.00 26.26 N
ATOM 23 N3 G B 17 7.585 19.598 -43.870 1.00 26.33 N
ATOM 24 C4 G B 17 6.313 19.156 -44.064 1.00 26.43 C
ATOM 25 P A B 18 3.338 25.414 -42.286 1.00 35.16 P
ATOM 26 OP1 A B 18 2.015 25.668 -42.910 1.00 35.16 O
ATOM 27 OP2 A B 18 4.343 26.505 -42.358 1.00 35.07 O
ATOM 28 O5' A B 18 3.128 24.979 -40.757 1.00 36.64 O
TER
Atoms:
OP1: (16.552,16.851,-38.313)
OP2: (15.511,14.556,-38.777)
C3': (11.833,18.958,-38.340)
C1': (11.122,18.220,-40.457)
C5': (14.249,18.141,-38.709)
O6: (6.914,14.024,-40.484)
O4': (12.526,17.954,-40.307)
C8: (10.781,15.718,-40.143)
C2: (6.914,17.491,-40.976)
C6: (7.346,15.186,-40.580)
C5: (8.694,15.570,-40.443)
C4: (9.001,16.890,-40.580)
P: (15.415,16.004,-38.832)
C4': (13.015,18.781,-39.255)
C2': (10.701,19.145,-39.351)
O2': (10.781,20.485,-39.788)
N1: (6.505,16.211,-40.853)
N2: (5.936,18.377,-41.249)
N3: (8.165,17.904,-40.853)
N7: (9.825,14.812,-40.156)
N9: (10.343,16.989,-40.402)
O5': (13.976,16.703,-38.818)
O3': (11.941,20.051,-37.426)
OP2: (15.511,14.556,-38.777)
C3': (11.833,18.958,-38.340)
C1': (11.122,18.220,-40.457)
C5': (14.249,18.141,-38.709)
O6: (6.914,14.024,-40.484)
O4': (12.526,17.954,-40.307)
C8: (10.781,15.718,-40.143)
C2: (6.914,17.491,-40.976)
C6: (7.346,15.186,-40.580)
C5: (8.694,15.570,-40.443)
C4: (9.001,16.890,-40.580)
P: (15.415,16.004,-38.832)
C4': (13.015,18.781,-39.255)
C2': (10.701,19.145,-39.351)
O2': (10.781,20.485,-39.788)
N1: (6.505,16.211,-40.853)
N2: (5.936,18.377,-41.249)
N3: (8.165,17.904,-40.853)
N7: (9.825,14.812,-40.156)
N9: (10.343,16.989,-40.402)
O5': (13.976,16.703,-38.818)
O3': (11.941,20.051,-37.426)
OP1: (0.355,19.922,-40.152)
OP2: (0.881,18.319,-41.861)
C3': (3.457,22.789,-42.737)
C1': (5.112,21.420,-43.747)
C5': (3.457,21.056,-40.866)
O6: (6.641,15.679,-44.649)
O4': (5.240,21.284,-42.349)
C8: (4.147,19.086,-44.281)
C2: (8.462,18.615,-43.966)
C6: (6.828,16.851,-44.428)
C5: (5.893,17.893,-44.331)
C4: (6.313,19.156,-44.064)
P: (1.408,19.474,-41.104)
C4': (4.276,22.080,-41.686)
C2': (3.639,21.843,-43.921)
O2': (3.514,22.550,-45.141)
N1: (8.124,17.302,-44.228)
N2: (9.751,18.820,-43.816)
N3: (7.585,19.598,-43.870)
N7: (4.513,17.847,-44.473)
N9: (5.186,19.953,-44.020)
O5': (2.320,20.662,-41.658)
O3': (3.986,24.106,-42.941)
OP2: (0.881,18.319,-41.861)
C3': (3.457,22.789,-42.737)
C1': (5.112,21.420,-43.747)
C5': (3.457,21.056,-40.866)
O6: (6.641,15.679,-44.649)
O4': (5.240,21.284,-42.349)
C8: (4.147,19.086,-44.281)
C2: (8.462,18.615,-43.966)
C6: (6.828,16.851,-44.428)
C5: (5.893,17.893,-44.331)
C4: (6.313,19.156,-44.064)
P: (1.408,19.474,-41.104)
C4': (4.276,22.080,-41.686)
C2': (3.639,21.843,-43.921)
O2': (3.514,22.550,-45.141)
N1: (8.124,17.302,-44.228)
N2: (9.751,18.820,-43.816)
N3: (7.585,19.598,-43.870)
N7: (4.513,17.847,-44.473)
N9: (5.186,19.953,-44.020)
O5': (2.320,20.662,-41.658)
O3': (3.986,24.106,-42.941)
Image (generated by PyMOL):