Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 19.336 128.587 61.482 1.00 30.25 O
ATOM 2 P G A1278 19.258 128.505 63.085 1.00 31.89 P
ATOM 3 OP1 G A1278 19.882 127.224 63.466 1.00 29.70 O
ATOM 4 OP2 G A1278 17.874 128.808 63.526 1.00 30.48 O
ATOM 5 O5' G A1278 20.188 129.699 63.575 1.00 32.69 O
ATOM 6 C5' G A1278 21.588 129.736 63.245 1.00 30.79 C
ATOM 7 C4' G A1278 22.174 131.067 63.642 1.00 30.06 C
ATOM 8 O4' G A1278 21.543 132.127 62.870 1.00 31.46 O
ATOM 9 C3' G A1278 21.932 131.473 65.084 1.00 28.41 C
ATOM 10 O3' G A1278 22.880 130.880 65.953 1.00 30.23 O
ATOM 11 C2' G A1278 22.094 132.980 65.014 1.00 29.96 C
ATOM 12 O2' G A1278 23.457 133.341 64.947 1.00 30.34 O
ATOM 13 C1' G A1278 21.411 133.292 63.676 1.00 29.80 C
ATOM 14 N9 G A1278 19.987 133.574 63.836 1.00 29.06 N
ATOM 15 C8 G A1278 18.956 132.692 63.632 1.00 29.46 C
ATOM 16 N7 G A1278 17.784 133.199 63.901 1.00 28.77 N
ATOM 17 C5 G A1278 18.052 134.500 64.296 1.00 28.85 C
ATOM 18 C6 G A1278 17.170 135.528 64.718 1.00 28.77 C
ATOM 19 O6 G A1278 15.939 135.487 64.835 1.00 28.43 O
ATOM 20 N1 G A1278 17.855 136.694 65.025 1.00 26.67 N
ATOM 21 C2 G A1278 19.209 136.860 64.939 1.00 27.45 C
ATOM 22 N2 G A1278 19.664 138.080 65.277 1.00 26.74 N
ATOM 23 N3 G A1278 20.052 135.907 64.550 1.00 27.96 N
ATOM 24 C4 G A1278 19.407 134.759 64.248 1.00 29.30 C
ATOM 25 P C A1279 22.435 130.397 67.424 1.00 31.73 P
ATOM 26 OP1 C A1279 23.627 129.714 67.985 1.00 32.41 O
ATOM 27 OP2 C A1279 21.143 129.668 67.339 1.00 30.11 O
ATOM 28 O5' C A1279 22.202 131.739 68.249 1.00 29.70 O
TER
ATOM 1 O3' U B 505 20.964 140.848 64.837 1.00 29.02 O
ATOM 2 P G B 506 20.675 141.581 66.235 1.00 30.69 P
ATOM 3 OP1 G B 506 19.534 140.864 66.859 1.00 29.38 O
ATOM 4 OP2 G B 506 20.591 143.044 66.031 1.00 33.11 O
ATOM 5 O5' G B 506 21.980 141.292 67.093 1.00 32.07 O
ATOM 6 C5' G B 506 22.428 139.950 67.297 1.00 30.04 C
ATOM 7 C4' G B 506 23.839 139.945 67.816 1.00 28.09 C
ATOM 8 O4' G B 506 24.720 140.534 66.811 1.00 28.82 O
ATOM 9 C3' G B 506 24.069 140.748 69.100 1.00 28.28 C
ATOM 10 O3' G B 506 24.964 140.012 69.934 1.00 26.99 O
ATOM 11 C2' G B 506 24.771 141.998 68.576 1.00 29.72 C
ATOM 12 O2' G B 506 25.599 142.663 69.508 1.00 30.80 O
ATOM 13 C1' G B 506 25.618 141.385 67.470 1.00 29.83 C
ATOM 14 N9 G B 506 26.221 142.340 66.546 1.00 30.39 N
ATOM 15 C8 G B 506 25.689 143.522 66.085 1.00 28.78 C
ATOM 16 N7 G B 506 26.553 144.250 65.433 1.00 28.42 N
ATOM 17 C5 G B 506 27.712 143.486 65.431 1.00 30.64 C
ATOM 18 C6 G B 506 29.007 143.775 64.920 1.00 31.67 C
ATOM 19 O6 G B 506 29.407 144.814 64.387 1.00 31.77 O
ATOM 20 N1 G B 506 29.880 142.707 65.105 1.00 30.27 N
ATOM 21 C2 G B 506 29.557 141.521 65.720 1.00 31.64 C
ATOM 22 N2 G B 506 30.524 140.595 65.781 1.00 30.55 N
ATOM 23 N3 G B 506 28.367 141.258 66.234 1.00 31.27 N
ATOM 24 C4 G B 506 27.502 142.277 66.058 1.00 30.59 C
ATOM 25 P A B 507 24.827 140.086 71.536 1.00 26.59 P
ATOM 26 OP1 A B 507 23.439 140.487 71.893 1.00 24.89 O
ATOM 27 OP2 A B 507 25.970 140.889 72.039 1.00 24.32 O
ATOM 28 O5' A B 507 25.071 138.578 71.994 1.00 27.37 O
TER
ATOM 2 P G A1278 19.258 128.505 63.085 1.00 31.89 P
ATOM 3 OP1 G A1278 19.882 127.224 63.466 1.00 29.70 O
ATOM 4 OP2 G A1278 17.874 128.808 63.526 1.00 30.48 O
ATOM 5 O5' G A1278 20.188 129.699 63.575 1.00 32.69 O
ATOM 6 C5' G A1278 21.588 129.736 63.245 1.00 30.79 C
ATOM 7 C4' G A1278 22.174 131.067 63.642 1.00 30.06 C
ATOM 8 O4' G A1278 21.543 132.127 62.870 1.00 31.46 O
ATOM 9 C3' G A1278 21.932 131.473 65.084 1.00 28.41 C
ATOM 10 O3' G A1278 22.880 130.880 65.953 1.00 30.23 O
ATOM 11 C2' G A1278 22.094 132.980 65.014 1.00 29.96 C
ATOM 12 O2' G A1278 23.457 133.341 64.947 1.00 30.34 O
ATOM 13 C1' G A1278 21.411 133.292 63.676 1.00 29.80 C
ATOM 14 N9 G A1278 19.987 133.574 63.836 1.00 29.06 N
ATOM 15 C8 G A1278 18.956 132.692 63.632 1.00 29.46 C
ATOM 16 N7 G A1278 17.784 133.199 63.901 1.00 28.77 N
ATOM 17 C5 G A1278 18.052 134.500 64.296 1.00 28.85 C
ATOM 18 C6 G A1278 17.170 135.528 64.718 1.00 28.77 C
ATOM 19 O6 G A1278 15.939 135.487 64.835 1.00 28.43 O
ATOM 20 N1 G A1278 17.855 136.694 65.025 1.00 26.67 N
ATOM 21 C2 G A1278 19.209 136.860 64.939 1.00 27.45 C
ATOM 22 N2 G A1278 19.664 138.080 65.277 1.00 26.74 N
ATOM 23 N3 G A1278 20.052 135.907 64.550 1.00 27.96 N
ATOM 24 C4 G A1278 19.407 134.759 64.248 1.00 29.30 C
ATOM 25 P C A1279 22.435 130.397 67.424 1.00 31.73 P
ATOM 26 OP1 C A1279 23.627 129.714 67.985 1.00 32.41 O
ATOM 27 OP2 C A1279 21.143 129.668 67.339 1.00 30.11 O
ATOM 28 O5' C A1279 22.202 131.739 68.249 1.00 29.70 O
TER
ATOM 1 O3' U B 505 20.964 140.848 64.837 1.00 29.02 O
ATOM 2 P G B 506 20.675 141.581 66.235 1.00 30.69 P
ATOM 3 OP1 G B 506 19.534 140.864 66.859 1.00 29.38 O
ATOM 4 OP2 G B 506 20.591 143.044 66.031 1.00 33.11 O
ATOM 5 O5' G B 506 21.980 141.292 67.093 1.00 32.07 O
ATOM 6 C5' G B 506 22.428 139.950 67.297 1.00 30.04 C
ATOM 7 C4' G B 506 23.839 139.945 67.816 1.00 28.09 C
ATOM 8 O4' G B 506 24.720 140.534 66.811 1.00 28.82 O
ATOM 9 C3' G B 506 24.069 140.748 69.100 1.00 28.28 C
ATOM 10 O3' G B 506 24.964 140.012 69.934 1.00 26.99 O
ATOM 11 C2' G B 506 24.771 141.998 68.576 1.00 29.72 C
ATOM 12 O2' G B 506 25.599 142.663 69.508 1.00 30.80 O
ATOM 13 C1' G B 506 25.618 141.385 67.470 1.00 29.83 C
ATOM 14 N9 G B 506 26.221 142.340 66.546 1.00 30.39 N
ATOM 15 C8 G B 506 25.689 143.522 66.085 1.00 28.78 C
ATOM 16 N7 G B 506 26.553 144.250 65.433 1.00 28.42 N
ATOM 17 C5 G B 506 27.712 143.486 65.431 1.00 30.64 C
ATOM 18 C6 G B 506 29.007 143.775 64.920 1.00 31.67 C
ATOM 19 O6 G B 506 29.407 144.814 64.387 1.00 31.77 O
ATOM 20 N1 G B 506 29.880 142.707 65.105 1.00 30.27 N
ATOM 21 C2 G B 506 29.557 141.521 65.720 1.00 31.64 C
ATOM 22 N2 G B 506 30.524 140.595 65.781 1.00 30.55 N
ATOM 23 N3 G B 506 28.367 141.258 66.234 1.00 31.27 N
ATOM 24 C4 G B 506 27.502 142.277 66.058 1.00 30.59 C
ATOM 25 P A B 507 24.827 140.086 71.536 1.00 26.59 P
ATOM 26 OP1 A B 507 23.439 140.487 71.893 1.00 24.89 O
ATOM 27 OP2 A B 507 25.970 140.889 72.039 1.00 24.32 O
ATOM 28 O5' A B 507 25.071 138.578 71.994 1.00 27.37 O
TER
Atoms:
OP1: (19.882,127.224,63.466)
OP2: (17.874,128.808,63.526)
C3': (21.932,131.473,65.084)
C1': (21.411,133.292,63.676)
C5': (21.588,129.736,63.245)
O6: (15.939,135.487,64.835)
O4': (21.543,132.127,62.870)
C8: (18.956,132.692,63.632)
C2: (19.209,136.860,64.939)
C6: (17.170,135.528,64.718)
C5: (18.052,134.500,64.296)
C4: (19.407,134.759,64.248)
P: (19.258,128.505,63.085)
C4': (22.174,131.067,63.642)
C2': (22.094,132.980,65.014)
O2': (23.457,133.341,64.947)
N1: (17.855,136.694,65.025)
N2: (19.664,138.080,65.277)
N3: (20.052,135.907,64.550)
N7: (17.784,133.199,63.901)
N9: (19.987,133.574,63.836)
O5': (20.188,129.699,63.575)
O3': (22.880,130.880,65.953)
OP2: (17.874,128.808,63.526)
C3': (21.932,131.473,65.084)
C1': (21.411,133.292,63.676)
C5': (21.588,129.736,63.245)
O6: (15.939,135.487,64.835)
O4': (21.543,132.127,62.870)
C8: (18.956,132.692,63.632)
C2: (19.209,136.860,64.939)
C6: (17.170,135.528,64.718)
C5: (18.052,134.500,64.296)
C4: (19.407,134.759,64.248)
P: (19.258,128.505,63.085)
C4': (22.174,131.067,63.642)
C2': (22.094,132.980,65.014)
O2': (23.457,133.341,64.947)
N1: (17.855,136.694,65.025)
N2: (19.664,138.080,65.277)
N3: (20.052,135.907,64.550)
N7: (17.784,133.199,63.901)
N9: (19.987,133.574,63.836)
O5': (20.188,129.699,63.575)
O3': (22.880,130.880,65.953)
OP1: (19.534,140.864,66.859)
OP2: (20.591,143.044,66.031)
C3': (24.069,140.748,69.100)
C1': (25.618,141.385,67.470)
C5': (22.428,139.950,67.297)
O6: (29.407,144.814,64.387)
O4': (24.720,140.534,66.811)
C8: (25.689,143.522,66.085)
C2: (29.557,141.521,65.720)
C6: (29.007,143.775,64.920)
C5: (27.712,143.486,65.431)
C4: (27.502,142.277,66.058)
P: (20.675,141.581,66.235)
C4': (23.839,139.945,67.816)
C2': (24.771,141.998,68.576)
O2': (25.599,142.663,69.508)
N1: (29.880,142.707,65.105)
N2: (30.524,140.595,65.781)
N3: (28.367,141.258,66.234)
N7: (26.553,144.250,65.433)
N9: (26.221,142.340,66.546)
O5': (21.980,141.292,67.093)
O3': (24.964,140.012,69.934)
OP2: (20.591,143.044,66.031)
C3': (24.069,140.748,69.100)
C1': (25.618,141.385,67.470)
C5': (22.428,139.950,67.297)
O6: (29.407,144.814,64.387)
O4': (24.720,140.534,66.811)
C8: (25.689,143.522,66.085)
C2: (29.557,141.521,65.720)
C6: (29.007,143.775,64.920)
C5: (27.712,143.486,65.431)
C4: (27.502,142.277,66.058)
P: (20.675,141.581,66.235)
C4': (23.839,139.945,67.816)
C2': (24.771,141.998,68.576)
O2': (25.599,142.663,69.508)
N1: (29.880,142.707,65.105)
N2: (30.524,140.595,65.781)
N3: (28.367,141.258,66.234)
N7: (26.553,144.250,65.433)
N9: (26.221,142.340,66.546)
O5': (21.980,141.292,67.093)
O3': (24.964,140.012,69.934)
Image (generated by PyMOL):