Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01278:0506
Extra
PDB:
ATOM 1 O3' A A1277 19.484 129.063 61.434 1.00 42.87 O
ATOM 2 P G A1278 19.403 128.974 63.034 1.00 41.40 P
ATOM 3 OP1 G A1278 20.005 127.678 63.415 1.00 41.82 O
ATOM 4 OP2 G A1278 18.029 129.301 63.477 1.00 42.48 O
ATOM 5 O5' G A1278 20.343 130.161 63.520 1.00 44.77 O
ATOM 6 C5' G A1278 21.742 130.204 63.170 1.00 42.24 C
ATOM 7 C4' G A1278 22.326 131.534 63.570 1.00 41.45 C
ATOM 8 O4' G A1278 21.675 132.590 62.814 1.00 43.75 O
ATOM 9 C3' G A1278 22.081 131.929 65.012 1.00 40.59 C
ATOM 10 O3' G A1278 23.009 131.317 65.886 1.00 40.24 O
ATOM 11 C2' G A1278 22.223 133.440 64.952 1.00 41.47 C
ATOM 12 O2' G A1278 23.569 133.852 64.866 1.00 41.64 O
ATOM 13 C1' G A1278 21.528 133.746 63.625 1.00 41.44 C
ATOM 14 N9 G A1278 20.100 134.002 63.797 1.00 41.22 N
ATOM 15 C8 G A1278 19.079 133.101 63.622 1.00 40.40 C
ATOM 16 N7 G A1278 17.902 133.602 63.886 1.00 42.20 N
ATOM 17 C5 G A1278 18.156 134.918 64.246 1.00 40.49 C
ATOM 18 C6 G A1278 17.265 135.947 64.642 1.00 40.03 C
ATOM 19 O6 G A1278 16.029 135.907 64.728 1.00 41.26 O
ATOM 20 N1 G A1278 17.941 137.122 64.942 1.00 37.99 N
ATOM 21 C2 G A1278 19.296 137.301 64.849 1.00 37.70 C
ATOM 22 N2 G A1278 19.750 138.531 65.165 1.00 34.34 N
ATOM 23 N3 G A1278 20.141 136.351 64.470 1.00 38.39 N
ATOM 24 C4 G A1278 19.506 135.190 64.191 1.00 40.70 C
ATOM 25 P C A1279 22.552 130.909 67.371 1.00 42.44 P
ATOM 26 OP1 C A1279 23.750 130.300 67.995 1.00 42.28 O
ATOM 27 OP2 C A1279 21.280 130.126 67.296 1.00 38.59 O
ATOM 28 O5' C A1279 22.266 132.297 68.101 1.00 37.01 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
ATOM 2 P G A1278 19.403 128.974 63.034 1.00 41.40 P
ATOM 3 OP1 G A1278 20.005 127.678 63.415 1.00 41.82 O
ATOM 4 OP2 G A1278 18.029 129.301 63.477 1.00 42.48 O
ATOM 5 O5' G A1278 20.343 130.161 63.520 1.00 44.77 O
ATOM 6 C5' G A1278 21.742 130.204 63.170 1.00 42.24 C
ATOM 7 C4' G A1278 22.326 131.534 63.570 1.00 41.45 C
ATOM 8 O4' G A1278 21.675 132.590 62.814 1.00 43.75 O
ATOM 9 C3' G A1278 22.081 131.929 65.012 1.00 40.59 C
ATOM 10 O3' G A1278 23.009 131.317 65.886 1.00 40.24 O
ATOM 11 C2' G A1278 22.223 133.440 64.952 1.00 41.47 C
ATOM 12 O2' G A1278 23.569 133.852 64.866 1.00 41.64 O
ATOM 13 C1' G A1278 21.528 133.746 63.625 1.00 41.44 C
ATOM 14 N9 G A1278 20.100 134.002 63.797 1.00 41.22 N
ATOM 15 C8 G A1278 19.079 133.101 63.622 1.00 40.40 C
ATOM 16 N7 G A1278 17.902 133.602 63.886 1.00 42.20 N
ATOM 17 C5 G A1278 18.156 134.918 64.246 1.00 40.49 C
ATOM 18 C6 G A1278 17.265 135.947 64.642 1.00 40.03 C
ATOM 19 O6 G A1278 16.029 135.907 64.728 1.00 41.26 O
ATOM 20 N1 G A1278 17.941 137.122 64.942 1.00 37.99 N
ATOM 21 C2 G A1278 19.296 137.301 64.849 1.00 37.70 C
ATOM 22 N2 G A1278 19.750 138.531 65.165 1.00 34.34 N
ATOM 23 N3 G A1278 20.141 136.351 64.470 1.00 38.39 N
ATOM 24 C4 G A1278 19.506 135.190 64.191 1.00 40.70 C
ATOM 25 P C A1279 22.552 130.909 67.371 1.00 42.44 P
ATOM 26 OP1 C A1279 23.750 130.300 67.995 1.00 42.28 O
ATOM 27 OP2 C A1279 21.280 130.126 67.296 1.00 38.59 O
ATOM 28 O5' C A1279 22.266 132.297 68.101 1.00 37.01 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
Atoms:
OP1: (20.005,127.678,63.415)
OP2: (18.029,129.301,63.477)
C3': (22.081,131.929,65.012)
C1': (21.528,133.746,63.625)
C5': (21.742,130.204,63.170)
O6: (16.029,135.907,64.728)
O4': (21.675,132.590,62.814)
C8: (19.079,133.101,63.622)
C2: (19.296,137.301,64.849)
C6: (17.265,135.947,64.642)
C5: (18.156,134.918,64.246)
C4: (19.506,135.190,64.191)
P: (19.403,128.974,63.034)
C4': (22.326,131.534,63.570)
C2': (22.223,133.440,64.952)
O2': (23.569,133.852,64.866)
N1: (17.941,137.122,64.942)
N2: (19.750,138.531,65.165)
N3: (20.141,136.351,64.470)
N7: (17.902,133.602,63.886)
N9: (20.100,134.002,63.797)
O5': (20.343,130.161,63.520)
O3': (23.009,131.317,65.886)
OP2: (18.029,129.301,63.477)
C3': (22.081,131.929,65.012)
C1': (21.528,133.746,63.625)
C5': (21.742,130.204,63.170)
O6: (16.029,135.907,64.728)
O4': (21.675,132.590,62.814)
C8: (19.079,133.101,63.622)
C2: (19.296,137.301,64.849)
C6: (17.265,135.947,64.642)
C5: (18.156,134.918,64.246)
C4: (19.506,135.190,64.191)
P: (19.403,128.974,63.034)
C4': (22.326,131.534,63.570)
C2': (22.223,133.440,64.952)
O2': (23.569,133.852,64.866)
N1: (17.941,137.122,64.942)
N2: (19.750,138.531,65.165)
N3: (20.141,136.351,64.470)
N7: (17.902,133.602,63.886)
N9: (20.100,134.002,63.797)
O5': (20.343,130.161,63.520)
O3': (23.009,131.317,65.886)
OP1: (19.649,141.348,66.798)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
Image (generated by PyMOL):