ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Z43:A25:A28

Extra

PDB:
ATOM 1 O3' U A 24 -3.385 11.996 72.462 1.00 81.89 O
ATOM 2 P G A 25 -3.884 11.657 70.977 1.00 82.13 P
ATOM 3 OP1 G A 25 -5.263 12.163 70.809 1.00 83.17 O
ATOM 4 OP2 G A 25 -3.621 10.229 70.682 1.00 82.30 O
ATOM 5 O5' G A 25 -2.922 12.566 70.083 1.00 81.73 O
ATOM 6 C5' G A 25 -2.904 13.988 70.278 1.00 80.98 C
ATOM 7 C4' G A 25 -1.522 14.621 70.163 1.00 79.75 C
ATOM 8 O4' G A 25 -0.674 14.117 71.228 1.00 79.31 O
ATOM 9 C3' G A 25 -0.721 14.338 68.889 1.00 79.17 C
ATOM 10 O3' G A 25 -1.111 15.090 67.727 1.00 77.00 O
ATOM 11 C2' G A 25 0.690 14.668 69.393 1.00 79.72 C
ATOM 12 O2' G A 25 1.008 16.033 69.610 1.00 81.68 O
ATOM 13 C1' G A 25 0.646 13.955 70.725 1.00 79.11 C
ATOM 14 N9 G A 25 0.943 12.549 70.503 1.00 78.33 N
ATOM 15 C8 G A 25 0.095 11.504 70.752 1.00 78.60 C
ATOM 16 N7 G A 25 0.606 10.345 70.450 1.00 78.72 N
ATOM 17 C5 G A 25 1.867 10.641 69.962 1.00 78.36 C
ATOM 18 C6 G A 25 2.869 9.766 69.487 1.00 78.21 C
ATOM 19 O6 G A 25 2.830 8.533 69.404 1.00 77.85 O
ATOM 20 N1 G A 25 4.001 10.463 69.084 1.00 78.15 N
ATOM 21 C2 G A 25 4.135 11.828 69.143 1.00 78.25 C
ATOM 22 N2 G A 25 5.297 12.317 68.708 1.00 78.29 N
ATOM 23 N3 G A 25 3.203 12.660 69.590 1.00 78.45 N
ATOM 24 C4 G A 25 2.091 11.997 69.981 1.00 77.96 C
ATOM 25 P U A 26 -1.028 14.406 66.274 1.00 76.20 P
ATOM 26 OP1 U A 26 -2.352 14.558 65.646 1.00 75.16 O
ATOM 27 OP2 U A 26 -0.443 13.034 66.341 1.00 74.70 O
ATOM 28 O5' U A 26 -0.041 15.418 65.522 1.00 75.13 O
TER

ATOM 1 O3' A B 27 8.592 13.003 64.904 1.00 59.79 O
ATOM 2 P G B 28 8.775 12.251 66.305 1.00 59.70 P
ATOM 3 OP1 G B 28 9.646 11.048 66.205 1.00 59.83 O
ATOM 4 OP2 G B 28 7.397 12.114 66.837 1.00 60.86 O
ATOM 5 O5' G B 28 9.626 13.384 67.039 1.00 59.58 O
ATOM 6 C5' G B 28 10.238 13.221 68.329 1.00 58.73 C
ATOM 7 C4' G B 28 11.376 14.228 68.510 1.00 57.08 C
ATOM 8 O4' G B 28 11.130 15.390 67.686 1.00 54.47 O
ATOM 9 C3' G B 28 11.578 14.757 69.925 1.00 56.40 C
ATOM 10 O3' G B 28 12.596 13.979 70.603 1.00 59.39 O
ATOM 11 C2' G B 28 11.965 16.219 69.721 1.00 54.18 C
ATOM 12 O2' G B 28 13.335 16.510 69.504 1.00 52.80 O
ATOM 13 C1' G B 28 11.172 16.551 68.481 1.00 52.20 C
ATOM 14 N9 G B 28 9.825 16.882 68.842 1.00 49.43 N
ATOM 15 C8 G B 28 8.720 16.180 68.496 1.00 50.29 C
ATOM 16 N7 G B 28 7.614 16.659 68.977 1.00 51.49 N
ATOM 17 C5 G B 28 8.022 17.745 69.715 1.00 50.96 C
ATOM 18 C6 G B 28 7.245 18.643 70.445 1.00 50.00 C
ATOM 19 O6 G B 28 6.013 18.652 70.585 1.00 49.99 O
ATOM 20 N1 G B 28 8.058 19.587 71.048 1.00 49.41 N
ATOM 21 C2 G B 28 9.415 19.666 70.929 1.00 47.99 C
ATOM 22 N2 G B 28 10.040 20.650 71.576 1.00 49.76 N
ATOM 23 N3 G B 28 10.135 18.845 70.233 1.00 48.70 N
ATOM 24 C4 G B 28 9.381 17.900 69.647 1.00 50.21 C
ATOM 25 P G B 29 12.276 12.485 71.104 1.00 62.27 P
ATOM 26 OP1 G B 29 13.096 12.191 72.297 1.00 61.49 O
ATOM 27 OP2 G B 29 12.290 11.515 69.988 1.00 61.01 O
ATOM 28 O5' G B 29 10.770 12.712 71.582 1.00 60.48 O
TER

Atoms:
OP1: (-5.263,12.163,70.809)
OP2: (-3.621,10.229,70.682)
C3': (-0.721,14.338,68.889)
C1': (0.646,13.955,70.725)
C5': (-2.904,13.988,70.278)
O6: (2.830,8.533,69.404)
O4': (-0.674,14.117,71.228)
C8: (0.095,11.504,70.752)
C2: (4.135,11.828,69.143)
C6: (2.869,9.766,69.487)
C5: (1.867,10.641,69.962)
C4: (2.091,11.997,69.981)
P: (-3.884,11.657,70.977)
C4': (-1.522,14.621,70.163)
C2': (0.690,14.668,69.393)
O2': (1.008,16.033,69.610)
N1: (4.001,10.463,69.084)
N2: (5.297,12.317,68.708)
N3: (3.203,12.660,69.590)
N7: (0.606,10.345,70.450)
N9: (0.943,12.549,70.503)
O5': (-2.922,12.566,70.083)
O3': (-1.111,15.090,67.727)
OP1: (9.646,11.048,66.205)
OP2: (7.397,12.114,66.837)
C3': (11.578,14.757,69.925)
C1': (11.172,16.551,68.481)
C5': (10.238,13.221,68.329)
O6: (6.013,18.652,70.585)
O4': (11.130,15.390,67.686)
C8: (8.720,16.180,68.496)
C2: (9.415,19.666,70.929)
C6: (7.245,18.643,70.445)
C5: (8.022,17.745,69.715)
C4: (9.381,17.900,69.647)
P: (8.775,12.251,66.305)
C4': (11.376,14.228,68.510)
C2': (11.965,16.219,69.721)
O2': (13.335,16.510,69.504)
N1: (8.058,19.587,71.048)
N2: (10.040,20.650,71.576)
N3: (10.135,18.845,70.233)
N7: (7.614,16.659,68.977)
N9: (9.825,16.882,68.842)
O5': (9.626,13.384,67.039)
O3': (12.596,13.979,70.603)
Image (generated by PyMOL):
PyMOL image
show in jmol