ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01087:02016

Extra

PDB:
ATOM 1 O3' C A1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 2 P U A1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 3 OP1 U A1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 4 OP2 U A1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 5 O5' U A1087 47.552 102.388 115.871 1.00 40.88 O
ATOM 6 C5' U A1087 48.066 103.681 116.186 1.00 41.17 C
ATOM 7 C4' U A1087 46.987 104.712 116.030 1.00 41.93 C
ATOM 8 O4' U A1087 46.652 104.847 114.617 1.00 42.29 O
ATOM 9 C3' U A1087 45.684 104.368 116.745 1.00 41.69 C
ATOM 10 O3' U A1087 45.080 105.563 117.215 1.00 43.82 O
ATOM 11 C2' U A1087 44.846 103.774 115.620 1.00 41.67 C
ATOM 12 O2' U A1087 43.461 103.857 115.861 1.00 42.03 O
ATOM 13 C1' U A1087 45.262 104.672 114.461 1.00 41.85 C
ATOM 14 N1 U A1087 44.978 104.212 113.092 1.00 41.36 N
ATOM 15 C2 U A1087 44.423 105.142 112.224 1.00 41.90 C
ATOM 16 O2 U A1087 44.170 106.291 112.555 1.00 42.52 O
ATOM 17 N3 U A1087 44.174 104.680 110.957 1.00 40.77 N
ATOM 18 C4 U A1087 44.410 103.415 110.473 1.00 41.70 C
ATOM 19 O4 U A1087 44.112 103.152 109.303 1.00 42.29 O
ATOM 20 C5 U A1087 44.985 102.507 111.427 1.00 41.85 C
ATOM 21 C6 U A1087 45.244 102.928 112.673 1.00 41.56 C
ATOM 22 P C A1088 45.092 105.891 118.786 1.00 48.54 P
ATOM 23 OP1 C A1088 44.466 107.230 118.968 1.00 46.51 O
ATOM 24 OP2 C A1088 46.472 105.650 119.296 1.00 47.72 O
ATOM 25 O5' C A1088 44.140 104.772 119.414 1.00 47.87 O
TER

ATOM 1 O3' U B2015 42.481 108.553 109.920 1.00 29.84 O
ATOM 2 P G B2016 43.650 107.890 109.048 1.00 30.98 P
ATOM 3 OP1 G B2016 43.249 106.477 108.837 1.00 31.21 O
ATOM 4 OP2 G B2016 44.963 108.197 109.679 1.00 29.28 O
ATOM 5 O5' G B2016 43.581 108.649 107.651 1.00 28.61 O
ATOM 6 C5' G B2016 42.529 108.404 106.711 1.00 26.18 C
ATOM 7 C4' G B2016 42.652 109.364 105.554 1.00 26.62 C
ATOM 8 O4' G B2016 42.616 110.727 106.058 1.00 27.43 O
ATOM 9 C3' G B2016 43.972 109.277 104.816 1.00 26.54 C
ATOM 10 O3' G B2016 43.920 108.234 103.851 1.00 28.72 O
ATOM 11 C2' G B2016 44.098 110.662 104.199 1.00 26.21 C
ATOM 12 O2' G B2016 43.324 110.811 103.033 1.00 25.94 O
ATOM 13 C1' G B2016 43.493 111.542 105.296 1.00 29.05 C
ATOM 14 N9 G B2016 44.480 112.148 106.194 1.00 31.93 N
ATOM 15 C8 G B2016 45.038 111.582 107.314 1.00 32.54 C
ATOM 16 N7 G B2016 45.917 112.353 107.895 1.00 32.83 N
ATOM 17 C5 G B2016 45.941 113.500 107.116 1.00 32.50 C
ATOM 18 C6 G B2016 46.723 114.680 107.240 1.00 33.83 C
ATOM 19 O6 G B2016 47.597 114.950 108.083 1.00 34.66 O
ATOM 20 N1 G B2016 46.420 115.596 106.242 1.00 32.59 N
ATOM 21 C2 G B2016 45.498 115.404 105.247 1.00 31.58 C
ATOM 22 N2 G B2016 45.349 116.414 104.383 1.00 32.44 N
ATOM 23 N3 G B2016 44.777 114.308 105.110 1.00 31.21 N
ATOM 24 C4 G B2016 45.049 113.401 106.071 1.00 31.70 C
ATOM 25 P C B2017 45.187 107.260 103.650 1.00 31.33 P
ATOM 26 OP1 C B2017 44.800 106.246 102.645 1.00 29.42 O
ATOM 27 OP2 C B2017 45.674 106.810 104.986 1.00 30.91 O
ATOM 28 O5' C B2017 46.292 108.210 103.008 1.00 28.16 O
TER

Atoms:
C4: (44.410,103.415,110.473)
N3: (44.174,104.680,110.957)
OP1: (49.004,101.102,117.405)
OP2: (47.705,99.924,115.527)
C2: (44.423,105.142,112.224)
C1': (45.262,104.672,114.461)
C3': (45.684,104.368,116.745)
O5': (47.552,102.388,115.871)
O4': (46.652,104.847,114.617)
C5': (48.066,103.681,116.186)
P: (48.466,101.102,116.021)
C4': (46.987,104.712,116.030)
C2': (44.846,103.774,115.620)
O2': (43.461,103.857,115.861)
N1: (44.978,104.212,113.092)
O4: (44.112,103.152,109.303)
O2: (44.170,106.291,112.555)
C6: (45.244,102.928,112.673)
C5: (44.985,102.507,111.427)
O3': (45.080,105.563,117.215)
OP1: (43.249,106.477,108.837)
OP2: (44.963,108.197,109.679)
C3': (43.972,109.277,104.816)
C1': (43.493,111.542,105.296)
C5': (42.529,108.404,106.711)
O6: (47.597,114.950,108.083)
O4': (42.616,110.727,106.058)
C8: (45.038,111.582,107.314)
C2: (45.498,115.404,105.247)
C6: (46.723,114.680,107.240)
C5: (45.941,113.500,107.116)
C4: (45.049,113.401,106.071)
P: (43.650,107.890,109.048)
C4': (42.652,109.364,105.554)
C2': (44.098,110.662,104.199)
O2': (43.324,110.811,103.033)
N1: (46.420,115.596,106.242)
N2: (45.349,116.414,104.383)
N3: (44.777,114.308,105.110)
N7: (45.917,112.353,107.895)
N9: (44.480,112.148,106.194)
O5': (43.581,108.649,107.651)
O3': (43.920,108.234,103.851)
Image (generated by PyMOL):
PyMOL image
show in jmol