ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0891:01313

Extra

PDB:
ATOM 1 O3' U A 890 39.913 114.440 73.108 1.00 28.98 O
ATOM 2 P U A 891 38.788 113.620 73.917 1.00 30.95 P
ATOM 3 OP1 U A 891 39.154 113.536 75.343 1.00 32.30 O
ATOM 4 OP2 U A 891 38.461 112.383 73.187 1.00 32.32 O
ATOM 5 O5' U A 891 37.502 114.538 73.783 1.00 31.36 O
ATOM 6 C5' U A 891 37.344 115.734 74.552 1.00 30.15 C
ATOM 7 C4' U A 891 36.353 116.641 73.869 1.00 32.24 C
ATOM 8 O4' U A 891 37.021 117.368 72.805 1.00 32.60 O
ATOM 9 C3' U A 891 35.171 115.925 73.220 1.00 32.60 C
ATOM 10 O3' U A 891 34.023 116.739 73.290 1.00 32.59 O
ATOM 11 C2' U A 891 35.617 115.791 71.772 1.00 32.98 C
ATOM 12 O2' U A 891 34.532 115.687 70.870 1.00 32.43 O
ATOM 13 C1' U A 891 36.391 117.092 71.574 1.00 32.85 C
ATOM 14 N1 U A 891 37.433 116.991 70.546 1.00 34.61 N
ATOM 15 C2 U A 891 37.212 117.632 69.342 1.00 36.74 C
ATOM 16 O2 U A 891 36.215 118.292 69.117 1.00 38.47 O
ATOM 17 N3 U A 891 38.209 117.473 68.408 1.00 37.38 N
ATOM 18 C4 U A 891 39.386 116.766 68.560 1.00 36.30 C
ATOM 19 O4 U A 891 40.187 116.714 67.626 1.00 35.96 O
ATOM 20 C5 U A 891 39.548 116.146 69.841 1.00 36.40 C
ATOM 21 C6 U A 891 38.590 116.275 70.767 1.00 35.30 C
ATOM 22 P C A 892 32.909 116.422 74.388 1.00 36.83 P
ATOM 23 OP1 C A 892 31.818 117.425 74.223 1.00 37.00 O
ATOM 24 OP2 C A 892 33.589 116.303 75.692 1.00 35.73 O
ATOM 25 O5' C A 892 32.402 114.961 74.007 1.00 36.36 O
TER

ATOM 1 O3' C B1312 35.166 118.567 64.136 1.00 41.81 O
ATOM 2 P G B1313 35.717 117.839 65.456 1.00 36.23 P
ATOM 3 OP1 G B1313 37.003 118.499 65.771 1.00 38.99 O
ATOM 4 OP2 G B1313 35.673 116.365 65.299 1.00 36.06 O
ATOM 5 O5' G B1313 34.665 118.282 66.566 1.00 33.81 O
ATOM 6 C5' G B1313 34.209 119.647 66.644 1.00 32.45 C
ATOM 7 C4' G B1313 33.039 119.751 67.588 1.00 34.14 C
ATOM 8 O4' G B1313 32.017 118.820 67.141 1.00 36.61 O
ATOM 9 C3' G B1313 33.328 119.376 69.037 1.00 34.92 C
ATOM 10 O3' G B1313 32.370 120.025 69.860 1.00 35.49 O
ATOM 11 C2' G B1313 33.027 117.885 69.040 1.00 36.31 C
ATOM 12 O2' G B1313 32.714 117.371 70.316 1.00 37.53 O
ATOM 13 C1' G B1313 31.795 117.852 68.140 1.00 36.50 C
ATOM 14 N9 G B1313 31.548 116.572 67.495 1.00 35.77 N
ATOM 15 C8 G B1313 32.424 115.825 66.747 1.00 36.47 C
ATOM 16 N7 G B1313 31.901 114.712 66.311 1.00 37.68 N
ATOM 17 C5 G B1313 30.601 114.731 66.802 1.00 37.45 C
ATOM 18 C6 G B1313 29.552 113.794 66.654 1.00 37.00 C
ATOM 19 O6 G B1313 29.560 112.724 66.041 1.00 38.71 O
ATOM 20 N1 G B1313 28.400 114.209 67.312 1.00 35.78 N
ATOM 21 C2 G B1313 28.275 115.379 68.018 1.00 37.66 C
ATOM 22 N2 G B1313 27.082 115.609 68.584 1.00 38.44 N
ATOM 23 N3 G B1313 29.245 116.261 68.161 1.00 36.51 N
ATOM 24 C4 G B1313 30.372 115.875 67.532 1.00 36.60 C
ATOM 25 P A B1314 32.720 121.430 70.552 1.00 39.91 P
ATOM 26 OP1 A B1314 31.469 121.960 71.159 1.00 37.39 O
ATOM 27 OP2 A B1314 33.461 122.249 69.547 1.00 37.89 O
ATOM 28 O5' A B1314 33.711 121.032 71.730 1.00 37.55 O
TER

Atoms:
C4: (39.386,116.766,68.560)
N3: (38.209,117.473,68.408)
OP1: (39.154,113.536,75.343)
OP2: (38.461,112.383,73.187)
C2: (37.212,117.632,69.342)
C1': (36.391,117.092,71.574)
C3': (35.171,115.925,73.220)
O5': (37.502,114.538,73.783)
O4': (37.021,117.368,72.805)
C5': (37.344,115.734,74.552)
P: (38.788,113.620,73.917)
C4': (36.353,116.641,73.869)
C2': (35.617,115.791,71.772)
O2': (34.532,115.687,70.870)
N1: (37.433,116.991,70.546)
O4: (40.187,116.714,67.626)
O2: (36.215,118.292,69.117)
C6: (38.590,116.275,70.767)
C5: (39.548,116.146,69.841)
O3': (34.023,116.739,73.290)
OP1: (37.003,118.499,65.771)
OP2: (35.673,116.365,65.299)
C3': (33.328,119.376,69.037)
C1': (31.795,117.852,68.140)
C5': (34.209,119.647,66.644)
O6: (29.560,112.724,66.041)
O4': (32.017,118.820,67.141)
C8: (32.424,115.825,66.747)
C2: (28.275,115.379,68.018)
C6: (29.552,113.794,66.654)
C5: (30.601,114.731,66.802)
C4: (30.372,115.875,67.532)
P: (35.717,117.839,65.456)
C4': (33.039,119.751,67.588)
C2': (33.027,117.885,69.040)
O2': (32.714,117.371,70.316)
N1: (28.400,114.209,67.312)
N2: (27.082,115.609,68.584)
N3: (29.245,116.261,68.161)
N7: (31.901,114.712,66.311)
N9: (31.548,116.572,67.495)
O5': (34.665,118.282,66.566)
O3': (32.370,120.025,69.860)
Image (generated by PyMOL):
PyMOL image
show in jmol