ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1163:A525

Extra

PDB:
ATOM 1 O3' A A1162 -67.493-104.593 40.952 1.00 12.17 O
ATOM 2 P G A1163 -68.371-104.729 39.613 1.00 22.08 P
ATOM 3 OP1 G A1163 -69.579-103.886 39.831 1.00 31.32 O
ATOM 4 OP2 G A1163 -68.533-106.161 39.265 1.00 31.34 O
ATOM 5 O5' G A1163 -67.454-104.044 38.508 1.00 7.50 O
ATOM 6 C5' G A1163 -67.231-102.628 38.549 1.00 7.50 C
ATOM 7 C4' G A1163 -66.181-102.233 37.552 1.00 7.50 C
ATOM 8 O4' G A1163 -64.904-102.798 37.937 1.00 7.50 O
ATOM 9 C3' G A1163 -66.410-102.761 36.154 1.00 7.50 C
ATOM 10 O3' G A1163 -67.343-101.996 35.411 1.00 7.50 O
ATOM 11 C2' G A1163 -65.010-102.741 35.575 1.00 7.50 C
ATOM 12 O2' G A1163 -64.622-101.445 35.191 1.00 7.50 O
ATOM 13 C1' G A1163 -64.181-103.183 36.778 1.00 7.50 C
ATOM 14 N9 G A1163 -64.062-104.642 36.760 1.00 27.10 N
ATOM 15 C8 G A1163 -64.788-105.544 37.502 1.00 27.20 C
ATOM 16 N7 G A1163 -64.539-106.785 37.183 1.00 27.24 N
ATOM 17 C5 G A1163 -63.574-106.704 36.189 1.00 27.41 C
ATOM 18 C6 G A1163 -62.945-107.722 35.445 1.00 27.44 C
ATOM 19 O6 G A1163 -63.140-108.938 35.497 1.00 27.35 O
ATOM 20 N1 G A1163 -62.017-107.208 34.550 1.00 27.33 N
ATOM 21 C2 G A1163 -61.745-105.881 34.375 1.00 27.24 C
ATOM 22 N2 G A1163 -60.802-105.581 33.464 1.00 27.15 N
ATOM 23 N3 G A1163 -62.347-104.912 35.046 1.00 27.34 N
ATOM 24 C4 G A1163 -63.243-105.394 35.934 1.00 27.34 C
ATOM 25 P G A1164 -68.203-102.722 34.261 1.00 16.72 P
ATOM 26 OP1 G A1164 -69.110-101.726 33.634 1.00 51.71 O
ATOM 27 OP2 G A1164 -68.769-103.978 34.808 1.00 51.87 O
ATOM 28 O5' G A1164 -67.072-103.105 33.215 1.00 12.15 O
TER

ATOM 1 O3' U B 524 -57.585-104.982 32.915 1.00 4.37 O
ATOM 2 P G B 525 -57.793-105.278 31.359 1.00 20.97 P
ATOM 3 OP1 G B 525 -58.760-106.377 31.187 1.00 0.79 O
ATOM 4 OP2 G B 525 -56.451-105.351 30.710 1.00 0.79 O
ATOM 5 O5' G B 525 -58.589-104.012 30.866 1.00 48.61 O
ATOM 6 C5' G B 525 -58.498-103.618 29.529 1.00 48.61 C
ATOM 7 C4' G B 525 -58.781-102.167 29.436 1.00 48.61 C
ATOM 8 O4' G B 525 -57.957-101.449 30.375 1.00 48.61 O
ATOM 9 C3' G B 525 -58.498-101.530 28.093 1.00 48.61 C
ATOM 10 O3' G B 525 -59.629-101.850 27.268 1.00 48.61 O
ATOM 11 C2' G B 525 -58.361-100.067 28.480 1.00 48.61 C
ATOM 12 O2' G B 525 -59.648 -99.498 28.594 1.00 48.61 O
ATOM 13 C1' G B 525 -57.782-100.146 29.897 1.00 48.61 C
ATOM 14 N9 G B 525 -56.400 -99.713 30.094 1.00 23.50 N
ATOM 15 C8 G B 525 -55.233-100.419 29.908 1.00 23.50 C
ATOM 16 N7 G B 525 -54.159 -99.713 30.170 1.00 23.50 N
ATOM 17 C5 G B 525 -54.650 -98.469 30.551 1.00 23.50 C
ATOM 18 C6 G B 525 -53.975 -97.282 30.933 1.00 23.50 C
ATOM 19 O6 G B 525 -52.761 -97.072 31.009 1.00 23.50 O
ATOM 20 N1 G B 525 -54.868 -96.264 31.236 1.00 23.50 N
ATOM 21 C2 G B 525 -56.233 -96.361 31.171 1.00 23.50 C
ATOM 22 N2 G B 525 -56.928 -95.276 31.504 1.00 23.50 N
ATOM 23 N3 G B 525 -56.873 -97.445 30.811 1.00 23.50 N
ATOM 24 C4 G B 525 -56.028 -98.456 30.517 1.00 23.50 C
ATOM 25 P A B 526 -60.083-100.897 26.050 1.00 40.04 P
ATOM 26 OP1 A B 526 -60.293-101.788 24.888 1.00 69.43 O
ATOM 27 OP2 A B 526 -59.173 -99.741 25.915 1.00 69.43 O
ATOM 28 O5' A B 526 -61.523-100.405 26.522 1.00 4.86 O
TER

Atoms:
OP1: (-69.579,-103.886,39.831)
OP2: (-68.533,-106.161,39.265)
C3': (-66.410,-102.761,36.154)
C1': (-64.181,-103.183,36.778)
C5': (-67.231,-102.628,38.549)
O6: (-63.140,-108.938,35.497)
O4': (-64.904,-102.798,37.937)
C8: (-64.788,-105.544,37.502)
C2: (-61.745,-105.881,34.375)
C6: (-62.945,-107.722,35.445)
C5: (-63.574,-106.704,36.189)
C4: (-63.243,-105.394,35.934)
P: (-68.371,-104.729,39.613)
C4': (-66.181,-102.233,37.552)
C2': (-65.010,-102.741,35.575)
O2': (-64.622,-101.445,35.191)
N1: (-62.017,-107.208,34.550)
N2: (-60.802,-105.581,33.464)
N3: (-62.347,-104.912,35.046)
N7: (-64.539,-106.785,37.183)
N9: (-64.062,-104.642,36.760)
O5': (-67.454,-104.044,38.508)
O3': (-67.343,-101.996,35.411)
OP1: (-58.760,-106.377,31.187)
OP2: (-56.451,-105.351,30.710)
C3': (-58.498,-101.530,28.093)
C1': (-57.782,-100.146,29.897)
C5': (-58.498,-103.618,29.529)
O6: (-52.761,-97.072,31.009)
O4': (-57.957,-101.449,30.375)
C8: (-55.233,-100.419,29.908)
C2: (-56.233,-96.361,31.171)
C6: (-53.975,-97.282,30.933)
C5: (-54.650,-98.469,30.551)
C4: (-56.028,-98.456,30.517)
P: (-57.793,-105.278,31.359)
C4': (-58.781,-102.167,29.436)
C2': (-58.361,-100.067,28.480)
O2': (-59.648,-99.498,28.594)
N1: (-54.868,-96.264,31.236)
N2: (-56.928,-95.276,31.504)
N3: (-56.873,-97.445,30.811)
N7: (-54.159,-99.713,30.170)
N9: (-56.400,-99.713,30.094)
O5': (-58.589,-104.012,30.866)
O3': (-59.629,-101.850,27.268)
Image (generated by PyMOL):
PyMOL image
show in jmol