ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:01278:0506

Extra

PDB:
ATOM 1 O3' A A1277 19.253 128.597 61.223 1.00 40.65 O
ATOM 2 P G A1278 19.122 128.504 62.821 1.00 40.15 P
ATOM 3 OP1 G A1278 19.713 127.207 63.212 1.00 39.30 O
ATOM 4 OP2 G A1278 17.734 128.819 63.211 1.00 40.08 O
ATOM 5 O5' G A1278 20.055 129.686 63.335 1.00 40.37 O
ATOM 6 C5' G A1278 21.465 129.709 63.028 1.00 41.08 C
ATOM 7 C4' G A1278 22.064 131.031 63.435 1.00 41.68 C
ATOM 8 O4' G A1278 21.450 132.091 62.659 1.00 41.80 O
ATOM 9 C3' G A1278 21.807 131.442 64.872 1.00 42.25 C
ATOM 10 O3' G A1278 22.736 130.847 65.759 1.00 43.49 O
ATOM 11 C2' G A1278 21.978 132.949 64.803 1.00 41.66 C
ATOM 12 O2' G A1278 23.344 133.304 64.767 1.00 41.08 O
ATOM 13 C1' G A1278 21.322 133.258 63.454 1.00 41.35 C
ATOM 14 N9 G A1278 19.900 133.544 63.584 1.00 40.93 N
ATOM 15 C8 G A1278 18.871 132.674 63.332 1.00 40.75 C
ATOM 16 N7 G A1278 17.694 133.184 63.581 1.00 42.04 N
ATOM 17 C5 G A1278 17.960 134.474 64.015 1.00 41.28 C
ATOM 18 C6 G A1278 17.078 135.492 64.443 1.00 41.25 C
ATOM 19 O6 G A1278 15.844 135.456 64.530 1.00 40.87 O
ATOM 20 N1 G A1278 17.766 136.648 64.793 1.00 40.93 N
ATOM 21 C2 G A1278 19.127 136.808 64.733 1.00 41.49 C
ATOM 22 N2 G A1278 19.599 138.021 65.084 1.00 41.88 N
ATOM 23 N3 G A1278 19.966 135.855 64.349 1.00 41.33 N
ATOM 24 C4 G A1278 19.317 134.722 64.007 1.00 41.61 C
ATOM 25 P U A1279 22.268 130.427 67.236 1.00 44.89 P
ATOM 26 OP1 U A1279 23.439 129.752 67.854 1.00 45.37 O
ATOM 27 OP2 U A1279 20.976 129.713 67.147 1.00 44.77 O
ATOM 28 O5' U A1279 22.033 131.814 67.981 1.00 44.55 O
TER

ATOM 1 O3' U B 505 20.781 140.792 64.647 1.00 42.16 O
ATOM 2 P G B 506 20.472 141.565 66.012 1.00 43.73 P
ATOM 3 OP1 G B 506 19.318 140.881 66.640 1.00 42.02 O
ATOM 4 OP2 G B 506 20.393 143.018 65.729 1.00 41.71 O
ATOM 5 O5' G B 506 21.781 141.277 66.873 1.00 43.65 O
ATOM 6 C5' G B 506 22.292 139.935 66.978 1.00 43.58 C
ATOM 7 C4' G B 506 23.686 139.932 67.547 1.00 43.37 C
ATOM 8 O4' G B 506 24.615 140.486 66.568 1.00 42.93 O
ATOM 9 C3' G B 506 23.886 140.750 68.829 1.00 43.15 C
ATOM 10 O3' G B 506 24.839 140.076 69.661 1.00 43.32 O
ATOM 11 C2' G B 506 24.546 142.012 68.289 1.00 42.81 C
ATOM 12 O2' G B 506 25.294 142.742 69.236 1.00 42.66 O
ATOM 13 C1' G B 506 25.455 141.391 67.238 1.00 42.55 C
ATOM 14 N9 G B 506 26.067 142.325 66.305 1.00 43.16 N
ATOM 15 C8 G B 506 25.548 143.508 65.838 1.00 43.35 C
ATOM 16 N7 G B 506 26.410 144.204 65.146 1.00 43.63 N
ATOM 17 C5 G B 506 27.554 143.413 65.130 1.00 43.84 C
ATOM 18 C6 G B 506 28.835 143.653 64.567 1.00 43.40 C
ATOM 19 O6 G B 506 29.236 144.654 63.980 1.00 43.69 O
ATOM 20 N1 G B 506 29.692 142.577 64.762 1.00 43.29 N
ATOM 21 C2 G B 506 29.368 141.422 65.422 1.00 43.64 C
ATOM 22 N2 G B 506 30.326 140.490 65.492 1.00 43.76 N
ATOM 23 N3 G B 506 28.188 141.195 65.974 1.00 44.37 N
ATOM 24 C4 G B 506 27.337 142.229 65.795 1.00 43.81 C
ATOM 25 P A B 507 24.639 140.038 71.259 1.00 42.40 P
ATOM 26 OP1 A B 507 23.214 140.302 71.571 1.00 41.90 O
ATOM 27 OP2 A B 507 25.693 140.888 71.873 1.00 42.38 O
ATOM 28 O5' A B 507 24.950 138.519 71.629 1.00 42.45 O
TER

Atoms:
OP1: (19.713,127.207,63.212)
OP2: (17.734,128.819,63.211)
C3': (21.807,131.442,64.872)
C1': (21.322,133.258,63.454)
C5': (21.465,129.709,63.028)
O6: (15.844,135.456,64.530)
O4': (21.450,132.091,62.659)
C8: (18.871,132.674,63.332)
C2: (19.127,136.808,64.733)
C6: (17.078,135.492,64.443)
C5: (17.960,134.474,64.015)
C4: (19.317,134.722,64.007)
P: (19.122,128.504,62.821)
C4': (22.064,131.031,63.435)
C2': (21.978,132.949,64.803)
O2': (23.344,133.304,64.767)
N1: (17.766,136.648,64.793)
N2: (19.599,138.021,65.084)
N3: (19.966,135.855,64.349)
N7: (17.694,133.184,63.581)
N9: (19.900,133.544,63.584)
O5': (20.055,129.686,63.335)
O3': (22.736,130.847,65.759)
OP1: (19.318,140.881,66.640)
OP2: (20.393,143.018,65.729)
C3': (23.886,140.750,68.829)
C1': (25.455,141.391,67.238)
C5': (22.292,139.935,66.978)
O6: (29.236,144.654,63.980)
O4': (24.615,140.486,66.568)
C8: (25.548,143.508,65.838)
C2: (29.368,141.422,65.422)
C6: (28.835,143.653,64.567)
C5: (27.554,143.413,65.130)
C4: (27.337,142.229,65.795)
P: (20.472,141.565,66.012)
C4': (23.686,139.932,67.547)
C2': (24.546,142.012,68.289)
O2': (25.294,142.742,69.236)
N1: (29.692,142.577,64.762)
N2: (30.326,140.490,65.492)
N3: (28.188,141.195,65.974)
N7: (26.410,144.204,65.146)
N9: (26.067,142.325,66.305)
O5': (21.781,141.277,66.873)
O3': (24.839,140.076,69.661)
Image (generated by PyMOL):
PyMOL image
show in jmol