ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01958:01903

Extra

PDB:
ATOM 1 O3' A A1957 111.566 121.666 86.303 1.00 47.68 O
ATOM 2 P U A1958 110.575 120.397 86.189 1.00 45.42 P
ATOM 3 OP1 U A1958 111.317 119.174 85.824 1.00 44.12 O
ATOM 4 OP2 U A1958 109.414 120.790 85.378 1.00 46.88 O
ATOM 5 O5' U A1958 110.044 120.271 87.683 1.00 46.32 O
ATOM 6 C5' U A1958 109.598 119.029 88.206 1.00 45.25 C
ATOM 7 C4' U A1958 108.095 119.011 88.270 1.00 45.91 C
ATOM 8 O4' U A1958 107.682 117.649 88.516 1.00 46.60 O
ATOM 9 C3' U A1958 107.419 119.850 89.351 1.00 45.16 C
ATOM 10 O3' U A1958 107.253 121.213 88.906 1.00 44.36 O
ATOM 11 C2' U A1958 106.100 119.100 89.542 1.00 46.26 C
ATOM 12 O2' U A1958 105.144 119.403 88.543 1.00 44.77 O
ATOM 13 C1' U A1958 106.541 117.643 89.338 1.00 47.13 C
ATOM 14 N1 U A1958 106.842 116.819 90.522 1.00 48.79 N
ATOM 15 C2 U A1958 106.861 115.439 90.339 1.00 49.52 C
ATOM 16 O2 U A1958 106.692 114.912 89.253 1.00 51.86 O
ATOM 17 N3 U A1958 107.086 114.700 91.469 1.00 49.44 N
ATOM 18 C4 U A1958 107.297 115.179 92.738 1.00 51.43 C
ATOM 19 O4 U A1958 107.391 114.381 93.668 1.00 54.36 O
ATOM 20 C5 U A1958 107.301 116.611 92.850 1.00 51.31 C
ATOM 21 C6 U A1958 107.081 117.363 91.765 1.00 49.54 C
ATOM 22 P G A1959 106.595 122.335 89.876 1.00 42.78 P
ATOM 23 OP1 G A1959 105.439 121.790 90.614 1.00 45.39 O
ATOM 24 OP2 G A1959 106.417 123.549 89.056 1.00 43.03 O
ATOM 25 O5' G A1959 107.708 122.658 90.963 1.00 45.04 O
TER

ATOM 1 O3' G B1902 105.656 110.095 89.706 1.00 54.05 O
ATOM 2 P G B1903 106.083 110.204 91.246 1.00 56.45 P
ATOM 3 OP1 G B1903 104.865 109.874 92.041 1.00 56.65 O
ATOM 4 OP2 G B1903 106.786 111.500 91.482 1.00 56.48 O
ATOM 5 O5' G B1903 107.135 109.020 91.409 1.00 55.22 O
ATOM 6 C5' G B1903 106.722 107.653 91.243 1.00 54.73 C
ATOM 7 C4' G B1903 107.812 106.718 91.695 1.00 54.75 C
ATOM 8 O4' G B1903 108.927 106.793 90.774 1.00 53.75 O
ATOM 9 C3' G B1903 108.416 107.031 93.053 1.00 55.10 C
ATOM 10 O3' G B1903 107.635 106.495 94.110 1.00 58.02 O
ATOM 11 C2' G B1903 109.778 106.369 92.948 1.00 54.37 C
ATOM 12 O2' G B1903 109.696 104.971 93.120 1.00 53.70 O
ATOM 13 C1' G B1903 110.141 106.684 91.496 1.00 54.52 C
ATOM 14 N9 G B1903 110.851 107.952 91.369 1.00 54.94 N
ATOM 15 C8 G B1903 110.319 109.167 91.007 1.00 54.63 C
ATOM 16 N7 G B1903 111.199 110.128 90.999 1.00 55.21 N
ATOM 17 C5 G B1903 112.385 109.511 91.380 1.00 55.65 C
ATOM 18 C6 G B1903 113.682 110.047 91.558 1.00 55.73 C
ATOM 19 O6 G B1903 114.059 111.210 91.413 1.00 58.02 O
ATOM 20 N1 G B1903 114.588 109.073 91.947 1.00 54.71 N
ATOM 21 C2 G B1903 114.292 107.755 92.138 1.00 54.42 C
ATOM 22 N2 G B1903 115.312 106.978 92.510 1.00 56.08 N
ATOM 23 N3 G B1903 113.089 107.237 91.979 1.00 53.98 N
ATOM 24 C4 G B1903 112.188 108.168 91.603 1.00 55.01 C
ATOM 25 P C B1904 107.652 107.202 95.548 1.00 61.01 P
ATOM 26 OP1 C B1904 106.798 106.388 96.440 1.00 62.74 O
ATOM 27 OP2 C B1904 107.356 108.650 95.372 1.00 60.73 O
ATOM 28 O5' C B1904 109.159 107.040 96.040 1.00 64.06 O
TER

Atoms:
C4: (107.297,115.179,92.738)
N3: (107.086,114.700,91.469)
OP1: (111.317,119.174,85.824)
OP2: (109.414,120.790,85.378)
C2: (106.861,115.439,90.339)
C1': (106.541,117.643,89.338)
C3': (107.419,119.850,89.351)
O5': (110.044,120.271,87.683)
O4': (107.682,117.649,88.516)
C5': (109.598,119.029,88.206)
P: (110.575,120.397,86.189)
C4': (108.095,119.011,88.270)
C2': (106.100,119.100,89.542)
O2': (105.144,119.403,88.543)
N1: (106.842,116.819,90.522)
O4: (107.391,114.381,93.668)
O2: (106.692,114.912,89.253)
C6: (107.081,117.363,91.765)
C5: (107.301,116.611,92.850)
O3': (107.253,121.213,88.906)
OP1: (104.865,109.874,92.041)
OP2: (106.786,111.500,91.482)
C3': (108.416,107.031,93.053)
C1': (110.141,106.684,91.496)
C5': (106.722,107.653,91.243)
O6: (114.059,111.210,91.413)
O4': (108.927,106.793,90.774)
C8: (110.319,109.167,91.007)
C2: (114.292,107.755,92.138)
C6: (113.682,110.047,91.558)
C5: (112.385,109.511,91.380)
C4: (112.188,108.168,91.603)
P: (106.083,110.204,91.246)
C4': (107.812,106.718,91.695)
C2': (109.778,106.369,92.948)
O2': (109.696,104.971,93.120)
N1: (114.588,109.073,91.947)
N2: (115.312,106.978,92.510)
N3: (113.089,107.237,91.979)
N7: (111.199,110.128,90.999)
N9: (110.851,107.952,91.369)
O5': (107.135,109.020,91.409)
O3': (107.635,106.495,94.110)
Image (generated by PyMOL):
PyMOL image
show in jmol