Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5A:B6:A5
Extra
PDB:
ATOM 1 O3' A A 5 38.056 20.432 65.443 1.00 95.25 O
ATOM 2 P G A 6 38.298 21.305 64.116 1.00 99.00 P
ATOM 3 OP1 G A 6 39.461 22.208 64.335 1.00 95.65 O
ATOM 4 OP2 G A 6 36.961 21.881 63.746 1.00 92.21 O
ATOM 5 O5' G A 6 38.747 20.238 63.011 1.00 97.17 O
ATOM 6 C5' G A 6 39.972 19.493 63.127 1.00 92.86 C
ATOM 7 C4' G A 6 40.087 18.481 61.994 1.00 90.56 C
ATOM 8 O4' G A 6 38.958 17.569 62.041 1.00 89.91 O
ATOM 9 C3' G A 6 40.081 19.033 60.575 1.00 89.29 C
ATOM 10 O3' G A 6 41.425 19.374 60.217 1.00 87.71 O
ATOM 11 C2' G A 6 39.561 17.844 59.768 1.00 88.30 C
ATOM 12 O2' G A 6 40.528 16.836 59.555 1.00 92.08 O
ATOM 13 C1' G A 6 38.545 17.241 60.729 1.00 85.26 C
ATOM 14 N9 G A 6 37.154 17.655 60.577 1.00 81.95 N
ATOM 15 C8 G A 6 36.475 18.662 61.254 1.00 81.06 C
ATOM 16 N7 G A 6 35.216 18.747 60.961 1.00 78.99 N
ATOM 17 C5 G A 6 35.022 17.721 60.045 1.00 79.00 C
ATOM 18 C6 G A 6 33.840 17.300 59.415 1.00 79.31 C
ATOM 19 O6 G A 6 32.690 17.725 59.546 1.00 78.85 O
ATOM 20 N1 G A 6 34.083 16.238 58.543 1.00 77.61 N
ATOM 21 C2 G A 6 35.326 15.650 58.280 1.00 78.51 C
ATOM 22 N2 G A 6 35.303 14.674 57.383 1.00 77.96 N
ATOM 23 N3 G A 6 36.436 16.054 58.871 1.00 80.32 N
ATOM 24 C4 G A 6 36.208 17.070 59.759 1.00 80.06 C
ATOM 25 P A A 7 41.722 20.138 58.829 1.00 88.62 P
ATOM 26 OP1 A A 7 42.797 21.143 59.015 1.00 87.63 O
ATOM 27 OP2 A A 7 40.401 20.551 58.247 1.00 85.68 O
ATOM 28 O5' A A 7 42.376 19.010 57.927 1.00 86.28 O
TER
ATOM 1 P G B 5 32.008 13.035 54.875 1.00 85.64 P
ATOM 2 OP1 G B 5 30.854 12.702 55.705 1.00 86.34 O
ATOM 3 OP2 G B 5 33.370 12.989 55.495 1.00 72.84 O
ATOM 4 O5' G B 5 32.042 12.057 53.632 1.00 82.62 O
ATOM 5 C5' G B 5 33.083 11.101 53.520 1.00 74.45 C
ATOM 6 C4' G B 5 32.512 9.780 53.093 1.00 72.17 C
ATOM 7 O4' G B 5 31.787 9.980 51.849 1.00 66.90 O
ATOM 8 C3' G B 5 33.666 8.840 52.722 1.00 69.80 C
ATOM 9 O3' G B 5 33.491 7.554 53.302 1.00 73.95 O
ATOM 10 C2' G B 5 33.796 8.838 51.208 1.00 66.62 C
ATOM 11 O2' G B 5 34.155 7.559 50.700 1.00 75.54 O
ATOM 12 C1' G B 5 32.373 9.205 50.832 1.00 65.47 C
ATOM 13 N9 G B 5 32.157 9.834 49.537 1.00 59.83 N
ATOM 14 C8 G B 5 31.212 9.483 48.591 1.00 57.22 C
ATOM 15 N7 G B 5 31.368 10.152 47.465 1.00 56.59 N
ATOM 16 C5 G B 5 32.461 10.997 47.718 1.00 54.34 C
ATOM 17 C6 G B 5 33.074 11.924 46.877 1.00 53.86 C
ATOM 18 O6 G B 5 32.796 12.216 45.722 1.00 56.94 O
ATOM 19 N1 G B 5 34.111 12.573 47.525 1.00 54.87 N
ATOM 20 C2 G B 5 34.504 12.345 48.810 1.00 54.73 C
ATOM 21 N2 G B 5 35.516 13.097 49.221 1.00 55.15 N
ATOM 22 N3 G B 5 33.943 11.457 49.607 1.00 54.96 N
ATOM 23 C4 G B 5 32.923 10.824 48.998 1.00 56.35 C
ATOM 24 P U B 6 33.691 7.360 54.883 1.00 76.07 P
ATOM 25 OP1 U B 6 33.254 6.019 55.235 1.00 80.51 O
ATOM 26 OP2 U B 6 33.117 8.498 55.569 1.00 77.60 O
ATOM 27 O5' U B 6 35.280 7.370 54.936 1.00 72.94 O
TER
ATOM 2 P G A 6 38.298 21.305 64.116 1.00 99.00 P
ATOM 3 OP1 G A 6 39.461 22.208 64.335 1.00 95.65 O
ATOM 4 OP2 G A 6 36.961 21.881 63.746 1.00 92.21 O
ATOM 5 O5' G A 6 38.747 20.238 63.011 1.00 97.17 O
ATOM 6 C5' G A 6 39.972 19.493 63.127 1.00 92.86 C
ATOM 7 C4' G A 6 40.087 18.481 61.994 1.00 90.56 C
ATOM 8 O4' G A 6 38.958 17.569 62.041 1.00 89.91 O
ATOM 9 C3' G A 6 40.081 19.033 60.575 1.00 89.29 C
ATOM 10 O3' G A 6 41.425 19.374 60.217 1.00 87.71 O
ATOM 11 C2' G A 6 39.561 17.844 59.768 1.00 88.30 C
ATOM 12 O2' G A 6 40.528 16.836 59.555 1.00 92.08 O
ATOM 13 C1' G A 6 38.545 17.241 60.729 1.00 85.26 C
ATOM 14 N9 G A 6 37.154 17.655 60.577 1.00 81.95 N
ATOM 15 C8 G A 6 36.475 18.662 61.254 1.00 81.06 C
ATOM 16 N7 G A 6 35.216 18.747 60.961 1.00 78.99 N
ATOM 17 C5 G A 6 35.022 17.721 60.045 1.00 79.00 C
ATOM 18 C6 G A 6 33.840 17.300 59.415 1.00 79.31 C
ATOM 19 O6 G A 6 32.690 17.725 59.546 1.00 78.85 O
ATOM 20 N1 G A 6 34.083 16.238 58.543 1.00 77.61 N
ATOM 21 C2 G A 6 35.326 15.650 58.280 1.00 78.51 C
ATOM 22 N2 G A 6 35.303 14.674 57.383 1.00 77.96 N
ATOM 23 N3 G A 6 36.436 16.054 58.871 1.00 80.32 N
ATOM 24 C4 G A 6 36.208 17.070 59.759 1.00 80.06 C
ATOM 25 P A A 7 41.722 20.138 58.829 1.00 88.62 P
ATOM 26 OP1 A A 7 42.797 21.143 59.015 1.00 87.63 O
ATOM 27 OP2 A A 7 40.401 20.551 58.247 1.00 85.68 O
ATOM 28 O5' A A 7 42.376 19.010 57.927 1.00 86.28 O
TER
ATOM 1 P G B 5 32.008 13.035 54.875 1.00 85.64 P
ATOM 2 OP1 G B 5 30.854 12.702 55.705 1.00 86.34 O
ATOM 3 OP2 G B 5 33.370 12.989 55.495 1.00 72.84 O
ATOM 4 O5' G B 5 32.042 12.057 53.632 1.00 82.62 O
ATOM 5 C5' G B 5 33.083 11.101 53.520 1.00 74.45 C
ATOM 6 C4' G B 5 32.512 9.780 53.093 1.00 72.17 C
ATOM 7 O4' G B 5 31.787 9.980 51.849 1.00 66.90 O
ATOM 8 C3' G B 5 33.666 8.840 52.722 1.00 69.80 C
ATOM 9 O3' G B 5 33.491 7.554 53.302 1.00 73.95 O
ATOM 10 C2' G B 5 33.796 8.838 51.208 1.00 66.62 C
ATOM 11 O2' G B 5 34.155 7.559 50.700 1.00 75.54 O
ATOM 12 C1' G B 5 32.373 9.205 50.832 1.00 65.47 C
ATOM 13 N9 G B 5 32.157 9.834 49.537 1.00 59.83 N
ATOM 14 C8 G B 5 31.212 9.483 48.591 1.00 57.22 C
ATOM 15 N7 G B 5 31.368 10.152 47.465 1.00 56.59 N
ATOM 16 C5 G B 5 32.461 10.997 47.718 1.00 54.34 C
ATOM 17 C6 G B 5 33.074 11.924 46.877 1.00 53.86 C
ATOM 18 O6 G B 5 32.796 12.216 45.722 1.00 56.94 O
ATOM 19 N1 G B 5 34.111 12.573 47.525 1.00 54.87 N
ATOM 20 C2 G B 5 34.504 12.345 48.810 1.00 54.73 C
ATOM 21 N2 G B 5 35.516 13.097 49.221 1.00 55.15 N
ATOM 22 N3 G B 5 33.943 11.457 49.607 1.00 54.96 N
ATOM 23 C4 G B 5 32.923 10.824 48.998 1.00 56.35 C
ATOM 24 P U B 6 33.691 7.360 54.883 1.00 76.07 P
ATOM 25 OP1 U B 6 33.254 6.019 55.235 1.00 80.51 O
ATOM 26 OP2 U B 6 33.117 8.498 55.569 1.00 77.60 O
ATOM 27 O5' U B 6 35.280 7.370 54.936 1.00 72.94 O
TER
Atoms:
OP1: (39.461,22.208,64.335)
OP2: (36.961,21.881,63.746)
C3': (40.081,19.033,60.575)
C1': (38.545,17.241,60.729)
C5': (39.972,19.493,63.127)
O6: (32.690,17.725,59.546)
O4': (38.958,17.569,62.041)
C8: (36.475,18.662,61.254)
C2: (35.326,15.650,58.280)
C6: (33.840,17.300,59.415)
C5: (35.022,17.721,60.045)
C4: (36.208,17.070,59.759)
P: (38.298,21.305,64.116)
C4': (40.087,18.481,61.994)
C2': (39.561,17.844,59.768)
O2': (40.528,16.836,59.555)
N1: (34.083,16.238,58.543)
N2: (35.303,14.674,57.383)
N3: (36.436,16.054,58.871)
N7: (35.216,18.747,60.961)
N9: (37.154,17.655,60.577)
O5': (38.747,20.238,63.011)
O3': (41.425,19.374,60.217)
OP2: (36.961,21.881,63.746)
C3': (40.081,19.033,60.575)
C1': (38.545,17.241,60.729)
C5': (39.972,19.493,63.127)
O6: (32.690,17.725,59.546)
O4': (38.958,17.569,62.041)
C8: (36.475,18.662,61.254)
C2: (35.326,15.650,58.280)
C6: (33.840,17.300,59.415)
C5: (35.022,17.721,60.045)
C4: (36.208,17.070,59.759)
P: (38.298,21.305,64.116)
C4': (40.087,18.481,61.994)
C2': (39.561,17.844,59.768)
O2': (40.528,16.836,59.555)
N1: (34.083,16.238,58.543)
N2: (35.303,14.674,57.383)
N3: (36.436,16.054,58.871)
N7: (35.216,18.747,60.961)
N9: (37.154,17.655,60.577)
O5': (38.747,20.238,63.011)
O3': (41.425,19.374,60.217)
OP1: (30.854,12.702,55.705)
OP2: (33.370,12.989,55.495)
C3': (33.666,8.840,52.722)
C1': (32.373,9.205,50.832)
C5': (33.083,11.101,53.520)
O6: (32.796,12.216,45.722)
O4': (31.787,9.980,51.849)
C8: (31.212,9.483,48.591)
C2: (34.504,12.345,48.810)
C6: (33.074,11.924,46.877)
C5: (32.461,10.997,47.718)
C4: (32.923,10.824,48.998)
P: (32.008,13.035,54.875)
C4': (32.512,9.780,53.093)
C2': (33.796,8.838,51.208)
O2': (34.155,7.559,50.700)
N1: (34.111,12.573,47.525)
N2: (35.516,13.097,49.221)
N3: (33.943,11.457,49.607)
N7: (31.368,10.152,47.465)
N9: (32.157,9.834,49.537)
O5': (32.042,12.057,53.632)
O3': (33.491,7.554,53.302)
OP2: (33.370,12.989,55.495)
C3': (33.666,8.840,52.722)
C1': (32.373,9.205,50.832)
C5': (33.083,11.101,53.520)
O6: (32.796,12.216,45.722)
O4': (31.787,9.980,51.849)
C8: (31.212,9.483,48.591)
C2: (34.504,12.345,48.810)
C6: (33.074,11.924,46.877)
C5: (32.461,10.997,47.718)
C4: (32.923,10.824,48.998)
P: (32.008,13.035,54.875)
C4': (32.512,9.780,53.093)
C2': (33.796,8.838,51.208)
O2': (34.155,7.559,50.700)
N1: (34.111,12.573,47.525)
N2: (35.516,13.097,49.221)
N3: (33.943,11.457,49.607)
N7: (31.368,10.152,47.465)
N9: (32.157,9.834,49.537)
O5': (32.042,12.057,53.632)
O3': (33.491,7.554,53.302)
Image (generated by PyMOL):