Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:B6:A5
Extra
PDB:
ATOM 1 O3' A A 5 38.229 20.530 66.170 1.00 83.56 O
ATOM 2 P G A 6 38.376 21.573 64.964 1.00 86.96 P
ATOM 3 OP1 G A 6 39.510 22.481 65.261 1.00 86.31 O
ATOM 4 OP2 G A 6 37.028 22.125 64.672 1.00 80.94 O
ATOM 5 O5' G A 6 38.844 20.674 63.738 1.00 84.33 O
ATOM 6 C5' G A 6 40.029 19.868 63.809 1.00 80.22 C
ATOM 7 C4' G A 6 40.048 18.866 62.666 1.00 78.90 C
ATOM 8 O4' G A 6 38.910 17.972 62.780 1.00 78.36 O
ATOM 9 C3' G A 6 39.920 19.469 61.276 1.00 77.07 C
ATOM 10 O3' G A 6 41.229 19.850 60.828 1.00 75.72 O
ATOM 11 C2' G A 6 39.356 18.300 60.475 1.00 76.61 C
ATOM 12 O2' G A 6 40.366 17.357 60.172 1.00 79.05 O
ATOM 13 C1' G A 6 38.424 17.646 61.492 1.00 71.98 C
ATOM 14 N9 G A 6 37.007 17.996 61.418 1.00 71.24 N
ATOM 15 C8 G A 6 36.343 18.988 62.106 1.00 70.11 C
ATOM 16 N7 G A 6 35.063 19.028 61.857 1.00 69.79 N
ATOM 17 C5 G A 6 34.870 18.002 60.941 1.00 66.67 C
ATOM 18 C6 G A 6 33.687 17.553 60.304 1.00 65.76 C
ATOM 19 O6 G A 6 32.528 17.969 60.443 1.00 64.93 O
ATOM 20 N1 G A 6 33.948 16.494 59.429 1.00 65.29 N
ATOM 21 C2 G A 6 35.182 15.927 59.208 1.00 64.32 C
ATOM 22 N2 G A 6 35.225 14.926 58.317 1.00 63.30 N
ATOM 23 N3 G A 6 36.292 16.318 59.812 1.00 66.44 N
ATOM 24 C4 G A 6 36.065 17.361 60.655 1.00 67.75 C
ATOM 25 P A A 7 41.413 20.597 59.423 1.00 79.13 P
ATOM 26 OP1 A A 7 42.433 21.655 59.508 1.00 78.40 O
ATOM 27 OP2 A A 7 40.032 20.916 58.929 1.00 73.55 O
ATOM 28 O5' A A 7 42.079 19.471 58.536 1.00 74.55 O
TER
ATOM 1 P G B 5 32.285 13.020 56.101 1.00 64.57 P
ATOM 2 OP1 G B 5 30.921 12.450 56.340 1.00 53.94 O
ATOM 3 OP2 G B 5 33.259 13.225 57.221 1.00 53.04 O
ATOM 4 O5' G B 5 33.060 12.058 55.088 1.00 62.97 O
ATOM 5 C5' G B 5 32.509 11.819 53.816 1.00 62.85 C
ATOM 6 C4' G B 5 32.226 10.358 53.596 1.00 58.38 C
ATOM 7 O4' G B 5 31.562 10.228 52.325 1.00 52.06 O
ATOM 8 C3' G B 5 33.492 9.524 53.526 1.00 57.39 C
ATOM 9 O3' G B 5 33.245 8.211 54.038 1.00 56.90 O
ATOM 10 C2' G B 5 33.815 9.471 52.034 1.00 54.02 C
ATOM 11 O2' G B 5 34.355 8.248 51.595 1.00 61.02 O
ATOM 12 C1' G B 5 32.421 9.612 51.416 1.00 52.54 C
ATOM 13 N9 G B 5 32.235 10.207 50.098 1.00 53.24 N
ATOM 14 C8 G B 5 31.312 9.821 49.151 1.00 52.03 C
ATOM 15 N7 G B 5 31.419 10.476 48.032 1.00 53.35 N
ATOM 16 C5 G B 5 32.473 11.352 48.257 1.00 51.42 C
ATOM 17 C6 G B 5 33.077 12.286 47.391 1.00 53.13 C
ATOM 18 O6 G B 5 32.831 12.502 46.188 1.00 53.80 O
ATOM 19 N1 G B 5 34.089 13.000 48.044 1.00 53.56 N
ATOM 20 C2 G B 5 34.487 12.812 49.357 1.00 51.53 C
ATOM 21 N2 G B 5 35.468 13.596 49.828 1.00 53.72 N
ATOM 22 N3 G B 5 33.959 11.919 50.154 1.00 51.81 N
ATOM 23 C4 G B 5 32.961 11.225 49.542 1.00 51.95 C
ATOM 24 P U B 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 25 OP1 U B 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 26 OP2 U B 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 27 O5' U B 6 35.276 7.744 55.472 1.00 59.08 O
TER
ATOM 2 P G A 6 38.376 21.573 64.964 1.00 86.96 P
ATOM 3 OP1 G A 6 39.510 22.481 65.261 1.00 86.31 O
ATOM 4 OP2 G A 6 37.028 22.125 64.672 1.00 80.94 O
ATOM 5 O5' G A 6 38.844 20.674 63.738 1.00 84.33 O
ATOM 6 C5' G A 6 40.029 19.868 63.809 1.00 80.22 C
ATOM 7 C4' G A 6 40.048 18.866 62.666 1.00 78.90 C
ATOM 8 O4' G A 6 38.910 17.972 62.780 1.00 78.36 O
ATOM 9 C3' G A 6 39.920 19.469 61.276 1.00 77.07 C
ATOM 10 O3' G A 6 41.229 19.850 60.828 1.00 75.72 O
ATOM 11 C2' G A 6 39.356 18.300 60.475 1.00 76.61 C
ATOM 12 O2' G A 6 40.366 17.357 60.172 1.00 79.05 O
ATOM 13 C1' G A 6 38.424 17.646 61.492 1.00 71.98 C
ATOM 14 N9 G A 6 37.007 17.996 61.418 1.00 71.24 N
ATOM 15 C8 G A 6 36.343 18.988 62.106 1.00 70.11 C
ATOM 16 N7 G A 6 35.063 19.028 61.857 1.00 69.79 N
ATOM 17 C5 G A 6 34.870 18.002 60.941 1.00 66.67 C
ATOM 18 C6 G A 6 33.687 17.553 60.304 1.00 65.76 C
ATOM 19 O6 G A 6 32.528 17.969 60.443 1.00 64.93 O
ATOM 20 N1 G A 6 33.948 16.494 59.429 1.00 65.29 N
ATOM 21 C2 G A 6 35.182 15.927 59.208 1.00 64.32 C
ATOM 22 N2 G A 6 35.225 14.926 58.317 1.00 63.30 N
ATOM 23 N3 G A 6 36.292 16.318 59.812 1.00 66.44 N
ATOM 24 C4 G A 6 36.065 17.361 60.655 1.00 67.75 C
ATOM 25 P A A 7 41.413 20.597 59.423 1.00 79.13 P
ATOM 26 OP1 A A 7 42.433 21.655 59.508 1.00 78.40 O
ATOM 27 OP2 A A 7 40.032 20.916 58.929 1.00 73.55 O
ATOM 28 O5' A A 7 42.079 19.471 58.536 1.00 74.55 O
TER
ATOM 1 P G B 5 32.285 13.020 56.101 1.00 64.57 P
ATOM 2 OP1 G B 5 30.921 12.450 56.340 1.00 53.94 O
ATOM 3 OP2 G B 5 33.259 13.225 57.221 1.00 53.04 O
ATOM 4 O5' G B 5 33.060 12.058 55.088 1.00 62.97 O
ATOM 5 C5' G B 5 32.509 11.819 53.816 1.00 62.85 C
ATOM 6 C4' G B 5 32.226 10.358 53.596 1.00 58.38 C
ATOM 7 O4' G B 5 31.562 10.228 52.325 1.00 52.06 O
ATOM 8 C3' G B 5 33.492 9.524 53.526 1.00 57.39 C
ATOM 9 O3' G B 5 33.245 8.211 54.038 1.00 56.90 O
ATOM 10 C2' G B 5 33.815 9.471 52.034 1.00 54.02 C
ATOM 11 O2' G B 5 34.355 8.248 51.595 1.00 61.02 O
ATOM 12 C1' G B 5 32.421 9.612 51.416 1.00 52.54 C
ATOM 13 N9 G B 5 32.235 10.207 50.098 1.00 53.24 N
ATOM 14 C8 G B 5 31.312 9.821 49.151 1.00 52.03 C
ATOM 15 N7 G B 5 31.419 10.476 48.032 1.00 53.35 N
ATOM 16 C5 G B 5 32.473 11.352 48.257 1.00 51.42 C
ATOM 17 C6 G B 5 33.077 12.286 47.391 1.00 53.13 C
ATOM 18 O6 G B 5 32.831 12.502 46.188 1.00 53.80 O
ATOM 19 N1 G B 5 34.089 13.000 48.044 1.00 53.56 N
ATOM 20 C2 G B 5 34.487 12.812 49.357 1.00 51.53 C
ATOM 21 N2 G B 5 35.468 13.596 49.828 1.00 53.72 N
ATOM 22 N3 G B 5 33.959 11.919 50.154 1.00 51.81 N
ATOM 23 C4 G B 5 32.961 11.225 49.542 1.00 51.95 C
ATOM 24 P U B 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 25 OP1 U B 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 26 OP2 U B 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 27 O5' U B 6 35.276 7.744 55.472 1.00 59.08 O
TER
Atoms:
OP1: (39.510,22.481,65.261)
OP2: (37.028,22.125,64.672)
C3': (39.920,19.469,61.276)
C1': (38.424,17.646,61.492)
C5': (40.029,19.868,63.809)
O6: (32.528,17.969,60.443)
O4': (38.910,17.972,62.780)
C8: (36.343,18.988,62.106)
C2: (35.182,15.927,59.208)
C6: (33.687,17.553,60.304)
C5: (34.870,18.002,60.941)
C4: (36.065,17.361,60.655)
P: (38.376,21.573,64.964)
C4': (40.048,18.866,62.666)
C2': (39.356,18.300,60.475)
O2': (40.366,17.357,60.172)
N1: (33.948,16.494,59.429)
N2: (35.225,14.926,58.317)
N3: (36.292,16.318,59.812)
N7: (35.063,19.028,61.857)
N9: (37.007,17.996,61.418)
O5': (38.844,20.674,63.738)
O3': (41.229,19.850,60.828)
OP2: (37.028,22.125,64.672)
C3': (39.920,19.469,61.276)
C1': (38.424,17.646,61.492)
C5': (40.029,19.868,63.809)
O6: (32.528,17.969,60.443)
O4': (38.910,17.972,62.780)
C8: (36.343,18.988,62.106)
C2: (35.182,15.927,59.208)
C6: (33.687,17.553,60.304)
C5: (34.870,18.002,60.941)
C4: (36.065,17.361,60.655)
P: (38.376,21.573,64.964)
C4': (40.048,18.866,62.666)
C2': (39.356,18.300,60.475)
O2': (40.366,17.357,60.172)
N1: (33.948,16.494,59.429)
N2: (35.225,14.926,58.317)
N3: (36.292,16.318,59.812)
N7: (35.063,19.028,61.857)
N9: (37.007,17.996,61.418)
O5': (38.844,20.674,63.738)
O3': (41.229,19.850,60.828)
OP1: (30.921,12.450,56.340)
OP2: (33.259,13.225,57.221)
C3': (33.492,9.524,53.526)
C1': (32.421,9.612,51.416)
C5': (32.509,11.819,53.816)
O6: (32.831,12.502,46.188)
O4': (31.562,10.228,52.325)
C8: (31.312,9.821,49.151)
C2: (34.487,12.812,49.357)
C6: (33.077,12.286,47.391)
C5: (32.473,11.352,48.257)
C4: (32.961,11.225,49.542)
P: (32.285,13.020,56.101)
C4': (32.226,10.358,53.596)
C2': (33.815,9.471,52.034)
O2': (34.355,8.248,51.595)
N1: (34.089,13.000,48.044)
N2: (35.468,13.596,49.828)
N3: (33.959,11.919,50.154)
N7: (31.419,10.476,48.032)
N9: (32.235,10.207,50.098)
O5': (33.060,12.058,55.088)
O3': (33.245,8.211,54.038)
OP2: (33.259,13.225,57.221)
C3': (33.492,9.524,53.526)
C1': (32.421,9.612,51.416)
C5': (32.509,11.819,53.816)
O6: (32.831,12.502,46.188)
O4': (31.562,10.228,52.325)
C8: (31.312,9.821,49.151)
C2: (34.487,12.812,49.357)
C6: (33.077,12.286,47.391)
C5: (32.473,11.352,48.257)
C4: (32.961,11.225,49.542)
P: (32.285,13.020,56.101)
C4': (32.226,10.358,53.596)
C2': (33.815,9.471,52.034)
O2': (34.355,8.248,51.595)
N1: (34.089,13.000,48.044)
N2: (35.468,13.596,49.828)
N3: (33.959,11.919,50.154)
N7: (31.419,10.476,48.032)
N9: (32.235,10.207,50.098)
O5': (33.060,12.058,55.088)
O3': (33.245,8.211,54.038)
Image (generated by PyMOL):