ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0891:01313

Extra

PDB:
ATOM 1 O3' U A 890 39.522 113.339 72.931 1.00 29.97 O
ATOM 2 P U A 891 38.407 112.496 73.722 1.00 30.33 P
ATOM 3 OP1 U A 891 38.840 112.361 75.119 1.00 30.71 O
ATOM 4 OP2 U A 891 38.020 111.281 72.962 1.00 29.38 O
ATOM 5 O5' U A 891 37.141 113.447 73.640 1.00 29.31 O
ATOM 6 C5' U A 891 37.010 114.609 74.458 1.00 29.11 C
ATOM 7 C4' U A 891 36.047 115.569 73.803 1.00 31.47 C
ATOM 8 O4' U A 891 36.736 116.262 72.721 1.00 33.42 O
ATOM 9 C3' U A 891 34.829 114.887 73.170 1.00 31.43 C
ATOM 10 O3' U A 891 33.672 115.698 73.253 1.00 31.17 O
ATOM 11 C2' U A 891 35.243 114.756 71.710 1.00 30.27 C
ATOM 12 O2' U A 891 34.128 114.708 70.851 1.00 27.61 O
ATOM 13 C1' U A 891 36.046 116.043 71.503 1.00 32.25 C
ATOM 14 N1 U A 891 37.026 115.956 70.407 1.00 31.38 N
ATOM 15 C2 U A 891 36.696 116.551 69.195 1.00 31.51 C
ATOM 16 O2 U A 891 35.656 117.147 69.013 1.00 30.58 O
ATOM 17 N3 U A 891 37.639 116.417 68.201 1.00 30.41 N
ATOM 18 C4 U A 891 38.854 115.771 68.291 1.00 28.79 C
ATOM 19 O4 U A 891 39.592 115.735 67.307 1.00 28.57 O
ATOM 20 C5 U A 891 39.131 115.189 69.574 1.00 28.66 C
ATOM 21 C6 U A 891 38.231 115.298 70.564 1.00 30.82 C
ATOM 22 P C A 892 32.521 115.330 74.308 1.00 34.24 P
ATOM 23 OP1 C A 892 31.390 116.285 74.090 1.00 31.18 O
ATOM 24 OP2 C A 892 33.141 115.235 75.658 1.00 30.03 O
ATOM 25 O5' C A 892 32.071 113.864 73.894 1.00 30.84 O
TER

ATOM 1 O3' C B1312 34.932 117.486 63.963 1.00 33.13 O
ATOM 2 P G B1313 35.374 116.770 65.336 1.00 32.18 P
ATOM 3 OP1 G B1313 36.597 117.464 65.812 1.00 38.65 O
ATOM 4 OP2 G B1313 35.396 115.298 65.198 1.00 32.45 O
ATOM 5 O5' G B1313 34.221 117.214 66.342 1.00 29.63 O
ATOM 6 C5' G B1313 33.828 118.595 66.446 1.00 27.24 C
ATOM 7 C4' G B1313 32.658 118.740 67.394 1.00 31.18 C
ATOM 8 O4' G B1313 31.623 117.814 66.977 1.00 33.20 O
ATOM 9 C3' G B1313 32.917 118.414 68.864 1.00 31.85 C
ATOM 10 O3' G B1313 31.949 119.112 69.637 1.00 32.64 O
ATOM 11 C2' G B1313 32.586 116.932 68.925 1.00 32.71 C
ATOM 12 O2' G B1313 32.240 116.472 70.212 1.00 33.45 O
ATOM 13 C1' G B1313 31.366 116.889 68.013 1.00 34.24 C
ATOM 14 N9 G B1313 31.106 115.592 67.407 1.00 33.17 N
ATOM 15 C8 G B1313 31.975 114.829 66.670 1.00 31.46 C
ATOM 16 N7 G B1313 31.439 113.725 66.238 1.00 33.21 N
ATOM 17 C5 G B1313 30.139 113.760 66.723 1.00 33.34 C
ATOM 18 C6 G B1313 29.077 112.835 66.565 1.00 32.70 C
ATOM 19 O6 G B1313 29.085 111.759 65.953 1.00 32.26 O
ATOM 20 N1 G B1313 27.918 113.269 67.211 1.00 31.59 N
ATOM 21 C2 G B1313 27.806 114.442 67.927 1.00 32.98 C
ATOM 22 N2 G B1313 26.608 114.702 68.480 1.00 31.08 N
ATOM 23 N3 G B1313 28.798 115.305 68.087 1.00 33.19 N
ATOM 24 C4 G B1313 29.924 114.903 67.456 1.00 32.91 C
ATOM 25 P A B1314 32.337 120.505 70.339 1.00 36.36 P
ATOM 26 OP1 A B1314 31.109 121.086 70.945 1.00 33.49 O
ATOM 27 OP2 A B1314 33.101 121.300 69.332 1.00 36.50 O
ATOM 28 O5' A B1314 33.318 120.065 71.516 1.00 35.08 O
TER

Atoms:
C4: (38.854,115.771,68.291)
N3: (37.639,116.417,68.201)
OP1: (38.840,112.361,75.119)
OP2: (38.020,111.281,72.962)
C2: (36.696,116.551,69.195)
C1': (36.046,116.043,71.503)
C3': (34.829,114.887,73.170)
O5': (37.141,113.447,73.640)
O4': (36.736,116.262,72.721)
C5': (37.010,114.609,74.458)
P: (38.407,112.496,73.722)
C4': (36.047,115.569,73.803)
C2': (35.243,114.756,71.710)
O2': (34.128,114.708,70.851)
N1: (37.026,115.956,70.407)
O4: (39.592,115.735,67.307)
O2: (35.656,117.147,69.013)
C6: (38.231,115.298,70.564)
C5: (39.131,115.189,69.574)
O3': (33.672,115.698,73.253)
OP1: (36.597,117.464,65.812)
OP2: (35.396,115.298,65.198)
C3': (32.917,118.414,68.864)
C1': (31.366,116.889,68.013)
C5': (33.828,118.595,66.446)
O6: (29.085,111.759,65.953)
O4': (31.623,117.814,66.977)
C8: (31.975,114.829,66.670)
C2: (27.806,114.442,67.927)
C6: (29.077,112.835,66.565)
C5: (30.139,113.760,66.723)
C4: (29.924,114.903,67.456)
P: (35.374,116.770,65.336)
C4': (32.658,118.740,67.394)
C2': (32.586,116.932,68.925)
O2': (32.240,116.472,70.212)
N1: (27.918,113.269,67.211)
N2: (26.608,114.702,68.480)
N3: (28.798,115.305,68.087)
N7: (31.439,113.725,66.238)
N9: (31.106,115.592,67.407)
O5': (34.221,117.214,66.342)
O3': (31.949,119.112,69.637)
Image (generated by PyMOL):
PyMOL image
show in jmol