Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A891:A1313
Extra
PDB:
ATOM 1 O3' U A 890 39.818 113.987 73.213 1.00 25.97 O
ATOM 2 P U A 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 3 OP1 U A 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 4 OP2 U A 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 5 O5' U A 891 37.432 114.032 74.016 1.00 25.91 O
ATOM 6 C5' U A 891 37.301 115.269 74.718 1.00 25.74 C
ATOM 7 C4' U A 891 36.314 116.167 74.004 1.00 27.21 C
ATOM 8 O4' U A 891 36.980 116.909 72.952 1.00 27.56 O
ATOM 9 C3' U A 891 35.112 115.488 73.358 1.00 26.70 C
ATOM 10 O3' U A 891 33.971 116.313 73.434 1.00 24.38 O
ATOM 11 C2' U A 891 35.512 115.411 71.897 1.00 27.61 C
ATOM 12 O2' U A 891 34.339 115.383 71.115 1.00 27.34 O
ATOM 13 C1' U A 891 36.306 116.711 71.730 1.00 28.49 C
ATOM 14 N1 U A 891 37.314 116.668 70.658 1.00 28.34 N
ATOM 15 C2 U A 891 37.017 117.284 69.467 1.00 28.99 C
ATOM 16 O2 U A 891 35.989 117.910 69.287 1.00 31.73 O
ATOM 17 N3 U A 891 37.972 117.153 68.488 1.00 29.26 N
ATOM 18 C4 U A 891 39.169 116.498 68.579 1.00 29.64 C
ATOM 19 O4 U A 891 39.838 116.322 67.561 1.00 29.07 O
ATOM 20 C5 U A 891 39.424 115.928 69.859 1.00 29.93 C
ATOM 21 C6 U A 891 38.507 116.027 70.828 1.00 29.16 C
ATOM 22 P C A 892 32.784 115.910 74.413 1.00 26.91 P
ATOM 23 OP1 C A 892 31.619 116.785 74.158 1.00 26.18 O
ATOM 24 OP2 C A 892 33.389 115.872 75.761 1.00 26.85 O
ATOM 25 O5' C A 892 32.421 114.431 73.954 1.00 29.47 O
TER
ATOM 1 O3' C B1312 35.095 118.166 64.269 1.00 37.52 O
ATOM 2 P G B1313 35.622 117.400 65.580 1.00 35.55 P
ATOM 3 OP1 G B1313 36.966 117.929 65.922 1.00 36.94 O
ATOM 4 OP2 G B1313 35.442 115.941 65.415 1.00 36.31 O
ATOM 5 O5' G B1313 34.602 117.917 66.686 1.00 35.31 O
ATOM 6 C5' G B1313 34.109 119.279 66.653 1.00 36.48 C
ATOM 7 C4' G B1313 32.957 119.430 67.609 1.00 36.99 C
ATOM 8 O4' G B1313 31.914 118.510 67.195 1.00 38.31 O
ATOM 9 C3' G B1313 33.285 119.044 69.043 1.00 37.28 C
ATOM 10 O3' G B1313 32.341 119.724 69.863 1.00 37.64 O
ATOM 11 C2' G B1313 33.005 117.545 69.036 1.00 37.07 C
ATOM 12 O2' G B1313 32.763 117.003 70.312 1.00 38.88 O
ATOM 13 C1' G B1313 31.737 117.510 68.186 1.00 38.34 C
ATOM 14 N9 G B1313 31.454 116.236 67.534 1.00 37.14 N
ATOM 15 C8 G B1313 32.321 115.500 66.759 1.00 37.74 C
ATOM 16 N7 G B1313 31.812 114.372 66.350 1.00 38.77 N
ATOM 17 C5 G B1313 30.531 114.359 66.885 1.00 37.42 C
ATOM 18 C6 G B1313 29.525 113.378 66.797 1.00 36.81 C
ATOM 19 O6 G B1313 29.569 112.287 66.230 1.00 35.91 O
ATOM 20 N1 G B1313 28.372 113.767 67.467 1.00 37.95 N
ATOM 21 C2 G B1313 28.206 114.955 68.141 1.00 38.55 C
ATOM 22 N2 G B1313 26.995 115.131 68.735 1.00 39.65 N
ATOM 23 N3 G B1313 29.147 115.889 68.231 1.00 37.11 N
ATOM 24 C4 G B1313 30.280 115.519 67.592 1.00 36.82 C
ATOM 25 P A B1314 32.782 121.041 70.660 1.00 40.61 P
ATOM 26 OP1 A B1314 31.642 121.526 71.460 1.00 38.22 O
ATOM 27 OP2 A B1314 33.494 121.975 69.736 1.00 41.20 O
ATOM 28 O5' A B1314 33.795 120.481 71.739 1.00 38.51 O
TER
ATOM 2 P U A 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 3 OP1 U A 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 4 OP2 U A 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 5 O5' U A 891 37.432 114.032 74.016 1.00 25.91 O
ATOM 6 C5' U A 891 37.301 115.269 74.718 1.00 25.74 C
ATOM 7 C4' U A 891 36.314 116.167 74.004 1.00 27.21 C
ATOM 8 O4' U A 891 36.980 116.909 72.952 1.00 27.56 O
ATOM 9 C3' U A 891 35.112 115.488 73.358 1.00 26.70 C
ATOM 10 O3' U A 891 33.971 116.313 73.434 1.00 24.38 O
ATOM 11 C2' U A 891 35.512 115.411 71.897 1.00 27.61 C
ATOM 12 O2' U A 891 34.339 115.383 71.115 1.00 27.34 O
ATOM 13 C1' U A 891 36.306 116.711 71.730 1.00 28.49 C
ATOM 14 N1 U A 891 37.314 116.668 70.658 1.00 28.34 N
ATOM 15 C2 U A 891 37.017 117.284 69.467 1.00 28.99 C
ATOM 16 O2 U A 891 35.989 117.910 69.287 1.00 31.73 O
ATOM 17 N3 U A 891 37.972 117.153 68.488 1.00 29.26 N
ATOM 18 C4 U A 891 39.169 116.498 68.579 1.00 29.64 C
ATOM 19 O4 U A 891 39.838 116.322 67.561 1.00 29.07 O
ATOM 20 C5 U A 891 39.424 115.928 69.859 1.00 29.93 C
ATOM 21 C6 U A 891 38.507 116.027 70.828 1.00 29.16 C
ATOM 22 P C A 892 32.784 115.910 74.413 1.00 26.91 P
ATOM 23 OP1 C A 892 31.619 116.785 74.158 1.00 26.18 O
ATOM 24 OP2 C A 892 33.389 115.872 75.761 1.00 26.85 O
ATOM 25 O5' C A 892 32.421 114.431 73.954 1.00 29.47 O
TER
ATOM 1 O3' C B1312 35.095 118.166 64.269 1.00 37.52 O
ATOM 2 P G B1313 35.622 117.400 65.580 1.00 35.55 P
ATOM 3 OP1 G B1313 36.966 117.929 65.922 1.00 36.94 O
ATOM 4 OP2 G B1313 35.442 115.941 65.415 1.00 36.31 O
ATOM 5 O5' G B1313 34.602 117.917 66.686 1.00 35.31 O
ATOM 6 C5' G B1313 34.109 119.279 66.653 1.00 36.48 C
ATOM 7 C4' G B1313 32.957 119.430 67.609 1.00 36.99 C
ATOM 8 O4' G B1313 31.914 118.510 67.195 1.00 38.31 O
ATOM 9 C3' G B1313 33.285 119.044 69.043 1.00 37.28 C
ATOM 10 O3' G B1313 32.341 119.724 69.863 1.00 37.64 O
ATOM 11 C2' G B1313 33.005 117.545 69.036 1.00 37.07 C
ATOM 12 O2' G B1313 32.763 117.003 70.312 1.00 38.88 O
ATOM 13 C1' G B1313 31.737 117.510 68.186 1.00 38.34 C
ATOM 14 N9 G B1313 31.454 116.236 67.534 1.00 37.14 N
ATOM 15 C8 G B1313 32.321 115.500 66.759 1.00 37.74 C
ATOM 16 N7 G B1313 31.812 114.372 66.350 1.00 38.77 N
ATOM 17 C5 G B1313 30.531 114.359 66.885 1.00 37.42 C
ATOM 18 C6 G B1313 29.525 113.378 66.797 1.00 36.81 C
ATOM 19 O6 G B1313 29.569 112.287 66.230 1.00 35.91 O
ATOM 20 N1 G B1313 28.372 113.767 67.467 1.00 37.95 N
ATOM 21 C2 G B1313 28.206 114.955 68.141 1.00 38.55 C
ATOM 22 N2 G B1313 26.995 115.131 68.735 1.00 39.65 N
ATOM 23 N3 G B1313 29.147 115.889 68.231 1.00 37.11 N
ATOM 24 C4 G B1313 30.280 115.519 67.592 1.00 36.82 C
ATOM 25 P A B1314 32.782 121.041 70.660 1.00 40.61 P
ATOM 26 OP1 A B1314 31.642 121.526 71.460 1.00 38.22 O
ATOM 27 OP2 A B1314 33.494 121.975 69.736 1.00 41.20 O
ATOM 28 O5' A B1314 33.795 120.481 71.739 1.00 38.51 O
TER
Atoms:
C4: (39.169,116.498,68.579)
N3: (37.972,117.153,68.488)
OP1: (39.207,113.007,75.470)
OP2: (38.467,111.956,73.275)
C2: (37.017,117.284,69.467)
C1': (36.306,116.711,71.730)
C3': (35.112,115.488,73.358)
O5': (37.432,114.032,74.016)
O4': (36.980,116.909,72.952)
C5': (37.301,115.269,74.718)
P: (38.754,113.155,74.067)
C4': (36.314,116.167,74.004)
C2': (35.512,115.411,71.897)
O2': (34.339,115.383,71.115)
N1: (37.314,116.668,70.658)
O4: (39.838,116.322,67.561)
O2: (35.989,117.910,69.287)
C6: (38.507,116.027,70.828)
C5: (39.424,115.928,69.859)
O3': (33.971,116.313,73.434)
N3: (37.972,117.153,68.488)
OP1: (39.207,113.007,75.470)
OP2: (38.467,111.956,73.275)
C2: (37.017,117.284,69.467)
C1': (36.306,116.711,71.730)
C3': (35.112,115.488,73.358)
O5': (37.432,114.032,74.016)
O4': (36.980,116.909,72.952)
C5': (37.301,115.269,74.718)
P: (38.754,113.155,74.067)
C4': (36.314,116.167,74.004)
C2': (35.512,115.411,71.897)
O2': (34.339,115.383,71.115)
N1: (37.314,116.668,70.658)
O4: (39.838,116.322,67.561)
O2: (35.989,117.910,69.287)
C6: (38.507,116.027,70.828)
C5: (39.424,115.928,69.859)
O3': (33.971,116.313,73.434)
OP1: (36.966,117.929,65.922)
OP2: (35.442,115.941,65.415)
C3': (33.285,119.044,69.043)
C1': (31.737,117.510,68.186)
C5': (34.109,119.279,66.653)
O6: (29.569,112.287,66.230)
O4': (31.914,118.510,67.195)
C8: (32.321,115.500,66.759)
C2: (28.206,114.955,68.141)
C6: (29.525,113.378,66.797)
C5: (30.531,114.359,66.885)
C4: (30.280,115.519,67.592)
P: (35.622,117.400,65.580)
C4': (32.957,119.430,67.609)
C2': (33.005,117.545,69.036)
O2': (32.763,117.003,70.312)
N1: (28.372,113.767,67.467)
N2: (26.995,115.131,68.735)
N3: (29.147,115.889,68.231)
N7: (31.812,114.372,66.350)
N9: (31.454,116.236,67.534)
O5': (34.602,117.917,66.686)
O3': (32.341,119.724,69.863)
OP2: (35.442,115.941,65.415)
C3': (33.285,119.044,69.043)
C1': (31.737,117.510,68.186)
C5': (34.109,119.279,66.653)
O6: (29.569,112.287,66.230)
O4': (31.914,118.510,67.195)
C8: (32.321,115.500,66.759)
C2: (28.206,114.955,68.141)
C6: (29.525,113.378,66.797)
C5: (30.531,114.359,66.885)
C4: (30.280,115.519,67.592)
P: (35.622,117.400,65.580)
C4': (32.957,119.430,67.609)
C2': (33.005,117.545,69.036)
O2': (32.763,117.003,70.312)
N1: (28.372,113.767,67.467)
N2: (26.995,115.131,68.735)
N3: (29.147,115.889,68.231)
N7: (31.812,114.372,66.350)
N9: (31.454,116.236,67.534)
O5': (34.602,117.917,66.686)
O3': (32.341,119.724,69.863)
Image (generated by PyMOL):