Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1087:A2016
Extra
PDB:
ATOM 1 O3' C A1086 49.481 101.219 114.871 1.00 35.87 O
ATOM 2 P U A1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 3 OP1 U A1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 4 OP2 U A1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 5 O5' U A1087 47.357 102.187 115.833 1.00 33.84 O
ATOM 6 C5' U A1087 47.856 103.483 116.171 1.00 32.79 C
ATOM 7 C4' U A1087 46.787 104.521 115.973 1.00 32.82 C
ATOM 8 O4' U A1087 46.522 104.693 114.556 1.00 33.65 O
ATOM 9 C3' U A1087 45.443 104.203 116.616 1.00 33.54 C
ATOM 10 O3' U A1087 44.875 105.416 117.067 1.00 36.50 O
ATOM 11 C2' U A1087 44.614 103.697 115.447 1.00 33.26 C
ATOM 12 O2' U A1087 43.234 103.917 115.649 1.00 34.36 O
ATOM 13 C1' U A1087 45.134 104.597 114.339 1.00 33.96 C
ATOM 14 N1 U A1087 44.881 104.138 112.969 1.00 34.69 N
ATOM 15 C2 U A1087 44.279 105.039 112.114 1.00 35.74 C
ATOM 16 O2 U A1087 43.995 106.174 112.442 1.00 37.18 O
ATOM 17 N3 U A1087 44.026 104.564 110.855 1.00 35.77 N
ATOM 18 C4 U A1087 44.312 103.314 110.370 1.00 35.86 C
ATOM 19 O4 U A1087 44.069 103.056 109.197 1.00 36.38 O
ATOM 20 C5 U A1087 44.946 102.441 111.304 1.00 36.33 C
ATOM 21 C6 U A1087 45.208 102.873 112.542 1.00 36.26 C
ATOM 22 P C A1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 23 OP1 C A1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 24 OP2 C A1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 25 O5' C A1088 43.947 104.630 119.256 1.00 39.39 O
TER
ATOM 1 O3' U B2015 42.284 108.568 109.671 1.00 24.93 O
ATOM 2 P G B2016 43.484 107.882 108.871 1.00 25.40 P
ATOM 3 OP1 G B2016 43.106 106.491 108.575 1.00 26.03 O
ATOM 4 OP2 G B2016 44.745 108.153 109.609 1.00 25.88 O
ATOM 5 O5' G B2016 43.447 108.644 107.483 1.00 22.01 O
ATOM 6 C5' G B2016 42.370 108.404 106.568 1.00 21.83 C
ATOM 7 C4' G B2016 42.462 109.367 105.435 1.00 21.46 C
ATOM 8 O4' G B2016 42.405 110.719 105.965 1.00 21.54 O
ATOM 9 C3' G B2016 43.798 109.295 104.722 1.00 21.91 C
ATOM 10 O3' G B2016 43.769 108.209 103.794 1.00 24.07 O
ATOM 11 C2' G B2016 43.889 110.684 104.103 1.00 20.78 C
ATOM 12 O2' G B2016 43.060 110.809 102.967 1.00 19.25 O
ATOM 13 C1' G B2016 43.289 111.538 105.225 1.00 22.97 C
ATOM 14 N9 G B2016 44.311 112.092 106.114 1.00 24.70 N
ATOM 15 C8 G B2016 44.908 111.520 107.215 1.00 25.78 C
ATOM 16 N7 G B2016 45.813 112.287 107.763 1.00 26.14 N
ATOM 17 C5 G B2016 45.803 113.432 106.978 1.00 25.56 C
ATOM 18 C6 G B2016 46.561 114.615 107.067 1.00 26.85 C
ATOM 19 O6 G B2016 47.452 114.896 107.879 1.00 28.60 O
ATOM 20 N1 G B2016 46.207 115.527 106.066 1.00 25.56 N
ATOM 21 C2 G B2016 45.261 115.309 105.097 1.00 23.14 C
ATOM 22 N2 G B2016 45.055 116.297 104.212 1.00 24.05 N
ATOM 23 N3 G B2016 44.565 114.207 105.000 1.00 23.85 N
ATOM 24 C4 G B2016 44.878 113.322 105.965 1.00 24.42 C
ATOM 25 P C B2017 45.059 107.252 103.617 1.00 28.03 P
ATOM 26 OP1 C B2017 44.686 106.286 102.573 1.00 27.85 O
ATOM 27 OP2 C B2017 45.581 106.743 104.923 1.00 27.73 O
ATOM 28 O5' C B2017 46.173 108.221 103.028 1.00 26.41 O
TER
ATOM 2 P U A1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 3 OP1 U A1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 4 OP2 U A1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 5 O5' U A1087 47.357 102.187 115.833 1.00 33.84 O
ATOM 6 C5' U A1087 47.856 103.483 116.171 1.00 32.79 C
ATOM 7 C4' U A1087 46.787 104.521 115.973 1.00 32.82 C
ATOM 8 O4' U A1087 46.522 104.693 114.556 1.00 33.65 O
ATOM 9 C3' U A1087 45.443 104.203 116.616 1.00 33.54 C
ATOM 10 O3' U A1087 44.875 105.416 117.067 1.00 36.50 O
ATOM 11 C2' U A1087 44.614 103.697 115.447 1.00 33.26 C
ATOM 12 O2' U A1087 43.234 103.917 115.649 1.00 34.36 O
ATOM 13 C1' U A1087 45.134 104.597 114.339 1.00 33.96 C
ATOM 14 N1 U A1087 44.881 104.138 112.969 1.00 34.69 N
ATOM 15 C2 U A1087 44.279 105.039 112.114 1.00 35.74 C
ATOM 16 O2 U A1087 43.995 106.174 112.442 1.00 37.18 O
ATOM 17 N3 U A1087 44.026 104.564 110.855 1.00 35.77 N
ATOM 18 C4 U A1087 44.312 103.314 110.370 1.00 35.86 C
ATOM 19 O4 U A1087 44.069 103.056 109.197 1.00 36.38 O
ATOM 20 C5 U A1087 44.946 102.441 111.304 1.00 36.33 C
ATOM 21 C6 U A1087 45.208 102.873 112.542 1.00 36.26 C
ATOM 22 P C A1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 23 OP1 C A1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 24 OP2 C A1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 25 O5' C A1088 43.947 104.630 119.256 1.00 39.39 O
TER
ATOM 1 O3' U B2015 42.284 108.568 109.671 1.00 24.93 O
ATOM 2 P G B2016 43.484 107.882 108.871 1.00 25.40 P
ATOM 3 OP1 G B2016 43.106 106.491 108.575 1.00 26.03 O
ATOM 4 OP2 G B2016 44.745 108.153 109.609 1.00 25.88 O
ATOM 5 O5' G B2016 43.447 108.644 107.483 1.00 22.01 O
ATOM 6 C5' G B2016 42.370 108.404 106.568 1.00 21.83 C
ATOM 7 C4' G B2016 42.462 109.367 105.435 1.00 21.46 C
ATOM 8 O4' G B2016 42.405 110.719 105.965 1.00 21.54 O
ATOM 9 C3' G B2016 43.798 109.295 104.722 1.00 21.91 C
ATOM 10 O3' G B2016 43.769 108.209 103.794 1.00 24.07 O
ATOM 11 C2' G B2016 43.889 110.684 104.103 1.00 20.78 C
ATOM 12 O2' G B2016 43.060 110.809 102.967 1.00 19.25 O
ATOM 13 C1' G B2016 43.289 111.538 105.225 1.00 22.97 C
ATOM 14 N9 G B2016 44.311 112.092 106.114 1.00 24.70 N
ATOM 15 C8 G B2016 44.908 111.520 107.215 1.00 25.78 C
ATOM 16 N7 G B2016 45.813 112.287 107.763 1.00 26.14 N
ATOM 17 C5 G B2016 45.803 113.432 106.978 1.00 25.56 C
ATOM 18 C6 G B2016 46.561 114.615 107.067 1.00 26.85 C
ATOM 19 O6 G B2016 47.452 114.896 107.879 1.00 28.60 O
ATOM 20 N1 G B2016 46.207 115.527 106.066 1.00 25.56 N
ATOM 21 C2 G B2016 45.261 115.309 105.097 1.00 23.14 C
ATOM 22 N2 G B2016 45.055 116.297 104.212 1.00 24.05 N
ATOM 23 N3 G B2016 44.565 114.207 105.000 1.00 23.85 N
ATOM 24 C4 G B2016 44.878 113.322 105.965 1.00 24.42 C
ATOM 25 P C B2017 45.059 107.252 103.617 1.00 28.03 P
ATOM 26 OP1 C B2017 44.686 106.286 102.573 1.00 27.85 O
ATOM 27 OP2 C B2017 45.581 106.743 104.923 1.00 27.73 O
ATOM 28 O5' C B2017 46.173 108.221 103.028 1.00 26.41 O
TER
Atoms:
C4: (44.312,103.314,110.370)
N3: (44.026,104.564,110.855)
OP1: (48.895,100.910,117.270)
OP2: (47.581,99.719,115.423)
C2: (44.279,105.039,112.114)
C1': (45.134,104.597,114.339)
C3': (45.443,104.203,116.616)
O5': (47.357,102.187,115.833)
O4': (46.522,104.693,114.556)
C5': (47.856,103.483,116.171)
P: (48.301,100.914,115.916)
C4': (46.787,104.521,115.973)
C2': (44.614,103.697,115.447)
O2': (43.234,103.917,115.649)
N1: (44.881,104.138,112.969)
O4: (44.069,103.056,109.197)
O2: (43.995,106.174,112.442)
C6: (45.208,102.873,112.542)
C5: (44.946,102.441,111.304)
O3': (44.875,105.416,117.067)
N3: (44.026,104.564,110.855)
OP1: (48.895,100.910,117.270)
OP2: (47.581,99.719,115.423)
C2: (44.279,105.039,112.114)
C1': (45.134,104.597,114.339)
C3': (45.443,104.203,116.616)
O5': (47.357,102.187,115.833)
O4': (46.522,104.693,114.556)
C5': (47.856,103.483,116.171)
P: (48.301,100.914,115.916)
C4': (46.787,104.521,115.973)
C2': (44.614,103.697,115.447)
O2': (43.234,103.917,115.649)
N1: (44.881,104.138,112.969)
O4: (44.069,103.056,109.197)
O2: (43.995,106.174,112.442)
C6: (45.208,102.873,112.542)
C5: (44.946,102.441,111.304)
O3': (44.875,105.416,117.067)
OP1: (43.106,106.491,108.575)
OP2: (44.745,108.153,109.609)
C3': (43.798,109.295,104.722)
C1': (43.289,111.538,105.225)
C5': (42.370,108.404,106.568)
O6: (47.452,114.896,107.879)
O4': (42.405,110.719,105.965)
C8: (44.908,111.520,107.215)
C2: (45.261,115.309,105.097)
C6: (46.561,114.615,107.067)
C5: (45.803,113.432,106.978)
C4: (44.878,113.322,105.965)
P: (43.484,107.882,108.871)
C4': (42.462,109.367,105.435)
C2': (43.889,110.684,104.103)
O2': (43.060,110.809,102.967)
N1: (46.207,115.527,106.066)
N2: (45.055,116.297,104.212)
N3: (44.565,114.207,105.000)
N7: (45.813,112.287,107.763)
N9: (44.311,112.092,106.114)
O5': (43.447,108.644,107.483)
O3': (43.769,108.209,103.794)
OP2: (44.745,108.153,109.609)
C3': (43.798,109.295,104.722)
C1': (43.289,111.538,105.225)
C5': (42.370,108.404,106.568)
O6: (47.452,114.896,107.879)
O4': (42.405,110.719,105.965)
C8: (44.908,111.520,107.215)
C2: (45.261,115.309,105.097)
C6: (46.561,114.615,107.067)
C5: (45.803,113.432,106.978)
C4: (44.878,113.322,105.965)
P: (43.484,107.882,108.871)
C4': (42.462,109.367,105.435)
C2': (43.889,110.684,104.103)
O2': (43.060,110.809,102.967)
N1: (46.207,115.527,106.066)
N2: (45.055,116.297,104.212)
N3: (44.565,114.207,105.000)
N7: (45.813,112.287,107.763)
N9: (44.311,112.092,106.114)
O5': (43.447,108.644,107.483)
O3': (43.769,108.209,103.794)
Image (generated by PyMOL):