ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01087:02016

Extra

PDB:
ATOM 1 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 2 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 3 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 4 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 5 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
ATOM 6 C5' U A1087 47.876 103.486 116.321 1.00 39.81 C
ATOM 7 C4' U A1087 46.811 104.527 116.104 1.00 39.86 C
ATOM 8 O4' U A1087 46.560 104.654 114.674 1.00 38.64 O
ATOM 9 C3' U A1087 45.456 104.249 116.754 1.00 38.72 C
ATOM 10 O3' U A1087 44.918 105.471 117.249 1.00 41.10 O
ATOM 11 C2' U A1087 44.624 103.760 115.573 1.00 38.26 C
ATOM 12 O2' U A1087 43.237 103.957 115.731 1.00 37.89 O
ATOM 13 C1' U A1087 45.172 104.641 114.457 1.00 37.95 C
ATOM 14 N1 U A1087 44.904 104.196 113.083 1.00 37.33 N
ATOM 15 C2 U A1087 44.329 105.116 112.223 1.00 37.86 C
ATOM 16 O2 U A1087 44.076 106.267 112.553 1.00 38.27 O
ATOM 17 N3 U A1087 44.063 104.643 110.960 1.00 36.94 N
ATOM 18 C4 U A1087 44.312 103.374 110.478 1.00 36.83 C
ATOM 19 O4 U A1087 43.984 103.089 109.323 1.00 36.20 O
ATOM 20 C5 U A1087 44.926 102.488 111.421 1.00 36.90 C
ATOM 21 C6 U A1087 45.196 102.919 112.660 1.00 37.58 C
ATOM 22 P C A1088 45.002 105.799 118.823 1.00 45.53 P
ATOM 23 OP1 C A1088 44.442 107.164 119.044 1.00 44.59 O
ATOM 24 OP2 C A1088 46.384 105.488 119.287 1.00 45.64 O
ATOM 25 O5' C A1088 44.027 104.729 119.491 1.00 46.54 O
TER

ATOM 1 O3' U B2015 42.355 108.555 109.798 1.00 30.30 O
ATOM 2 P G B2016 43.618 107.915 109.055 1.00 30.24 P
ATOM 3 OP1 G B2016 43.377 106.459 108.905 1.00 30.39 O
ATOM 4 OP2 G B2016 44.841 108.386 109.754 1.00 31.25 O
ATOM 5 O5' G B2016 43.573 108.576 107.612 1.00 29.57 O
ATOM 6 C5' G B2016 42.433 108.408 106.761 1.00 29.15 C
ATOM 7 C4' G B2016 42.511 109.372 105.610 1.00 28.72 C
ATOM 8 O4' G B2016 42.440 110.726 106.121 1.00 28.98 O
ATOM 9 C3' G B2016 43.815 109.324 104.837 1.00 28.22 C
ATOM 10 O3' G B2016 43.770 108.298 103.855 1.00 30.13 O
ATOM 11 C2' G B2016 43.872 110.712 104.223 1.00 28.94 C
ATOM 12 O2' G B2016 43.041 110.824 103.088 1.00 27.74 O
ATOM 13 C1' G B2016 43.287 111.565 105.355 1.00 31.02 C
ATOM 14 N9 G B2016 44.293 112.159 106.240 1.00 32.75 N
ATOM 15 C8 G B2016 44.823 111.618 107.387 1.00 32.65 C
ATOM 16 N7 G B2016 45.724 112.380 107.945 1.00 32.53 N
ATOM 17 C5 G B2016 45.794 113.494 107.121 1.00 32.76 C
ATOM 18 C6 G B2016 46.604 114.649 107.207 1.00 34.03 C
ATOM 19 O6 G B2016 47.466 114.930 108.052 1.00 36.63 O
ATOM 20 N1 G B2016 46.342 115.530 106.168 1.00 33.97 N
ATOM 21 C2 G B2016 45.430 115.327 105.170 1.00 32.68 C
ATOM 22 N2 G B2016 45.322 116.300 104.260 1.00 34.44 N
ATOM 23 N3 G B2016 44.680 114.253 105.070 1.00 32.29 N
ATOM 24 C4 G B2016 44.910 113.382 106.072 1.00 32.59 C
ATOM 25 P C B2017 45.001 107.275 103.701 1.00 31.85 P
ATOM 26 OP1 C B2017 44.544 106.212 102.772 1.00 30.38 O
ATOM 27 OP2 C B2017 45.499 106.898 105.063 1.00 31.14 O
ATOM 28 O5' C B2017 46.113 108.141 102.961 1.00 30.07 O
TER

Atoms:
C4: (44.312,103.374,110.478)
N3: (44.063,104.643,110.960)
OP1: (48.963,100.881,117.312)
OP2: (47.650,99.777,115.397)
C2: (44.329,105.116,112.223)
C1': (45.172,104.641,114.457)
C3': (45.456,104.249,116.754)
O5': (47.415,102.209,115.889)
O4': (46.560,104.654,114.674)
C5': (47.876,103.486,116.321)
P: (48.380,100.950,115.947)
C4': (46.811,104.527,116.104)
C2': (44.624,103.760,115.573)
O2': (43.237,103.957,115.731)
N1: (44.904,104.196,113.083)
O4: (43.984,103.089,109.323)
O2: (44.076,106.267,112.553)
C6: (45.196,102.919,112.660)
C5: (44.926,102.488,111.421)
O3': (44.918,105.471,117.249)
OP1: (43.377,106.459,108.905)
OP2: (44.841,108.386,109.754)
C3': (43.815,109.324,104.837)
C1': (43.287,111.565,105.355)
C5': (42.433,108.408,106.761)
O6: (47.466,114.930,108.052)
O4': (42.440,110.726,106.121)
C8: (44.823,111.618,107.387)
C2: (45.430,115.327,105.170)
C6: (46.604,114.649,107.207)
C5: (45.794,113.494,107.121)
C4: (44.910,113.382,106.072)
P: (43.618,107.915,109.055)
C4': (42.511,109.372,105.610)
C2': (43.872,110.712,104.223)
O2': (43.041,110.824,103.088)
N1: (46.342,115.530,106.168)
N2: (45.322,116.300,104.260)
N3: (44.680,114.253,105.070)
N7: (45.724,112.380,107.945)
N9: (44.293,112.159,106.240)
O5': (43.573,108.576,107.612)
O3': (43.770,108.298,103.855)
Image (generated by PyMOL):
PyMOL image
show in jmol