ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A722:A725

Extra

PDB:
ATOM 1 O3' G A 721 37.519 17.182 10.567 1.00 79.12 O
ATOM 2 P U A 722 37.196 18.756 10.448 1.00 74.50 P
ATOM 3 OP1 U A 722 38.054 19.495 11.410 1.00 78.03 O
ATOM 4 OP2 U A 722 35.721 18.953 10.477 1.00 76.84 O
ATOM 5 O5' U A 722 37.702 19.129 8.991 1.00 73.77 O
ATOM 6 C5' U A 722 39.076 19.363 8.747 1.00 76.94 C
ATOM 7 C4' U A 722 39.262 19.828 7.334 1.00 80.80 C
ATOM 8 O4' U A 722 38.814 18.769 6.460 1.00 80.51 O
ATOM 9 C3' U A 722 38.479 21.078 6.956 1.00 77.70 C
ATOM 10 O3' U A 722 39.324 22.219 7.188 1.00 76.28 O
ATOM 11 C2' U A 722 38.196 20.860 5.467 1.00 78.02 C
ATOM 12 O2' U A 722 39.219 21.387 4.644 1.00 72.11 O
ATOM 13 C1' U A 722 38.142 19.324 5.356 1.00 78.67 C
ATOM 14 N1 U A 722 36.802 18.725 5.324 1.00 76.73 N
ATOM 15 C2 U A 722 36.248 18.431 4.095 1.00 78.32 C
ATOM 16 O2 U A 722 36.815 18.663 3.035 1.00 81.06 O
ATOM 17 N3 U A 722 35.005 17.859 4.148 1.00 77.69 N
ATOM 18 C4 U A 722 34.275 17.567 5.279 1.00 82.38 C
ATOM 19 O4 U A 722 33.153 17.071 5.164 1.00 88.49 O
ATOM 20 C5 U A 722 34.917 17.908 6.508 1.00 76.87 C
ATOM 21 C6 U A 722 36.123 18.459 6.488 1.00 74.29 C
ATOM 22 P G A 723 38.726 23.715 7.184 1.00 75.49 P
ATOM 23 OP1 G A 723 39.880 24.606 6.902 1.00 71.55 O
ATOM 24 OP2 G A 723 37.944 23.903 8.438 1.00 69.34 O
ATOM 25 O5' G A 723 37.746 23.748 5.916 1.00 75.49 O
TER

ATOM 1 O3' A B 724 34.833 18.868 -0.905 1.00 78.96 O
ATOM 2 P G B 725 34.679 17.432 -0.163 1.00 83.72 P
ATOM 3 OP1 G B 725 33.387 16.827 -0.586 1.00 69.87 O
ATOM 4 OP2 G B 725 34.941 17.643 1.285 1.00 77.70 O
ATOM 5 O5' G B 725 35.841 16.536 -0.795 1.00 81.17 O
ATOM 6 C5' G B 725 36.860 15.923 0.010 1.00 78.02 C
ATOM 7 C4' G B 725 38.159 15.852 -0.772 1.00 79.59 C
ATOM 8 O4' G B 725 39.044 16.954 -0.406 1.00 80.67 O
ATOM 9 C3' G B 725 39.022 14.634 -0.520 1.00 79.24 C
ATOM 10 O3' G B 725 38.554 13.498 -1.197 1.00 80.59 O
ATOM 11 C2' G B 725 40.385 15.102 -0.989 1.00 79.69 C
ATOM 12 O2' G B 725 40.504 15.137 -2.395 1.00 79.52 O
ATOM 13 C1' G B 725 40.398 16.516 -0.425 1.00 76.47 C
ATOM 14 N9 G B 725 40.863 16.397 0.954 1.00 74.93 N
ATOM 15 C8 G B 725 40.108 16.453 2.103 1.00 74.76 C
ATOM 16 N7 G B 725 40.799 16.198 3.179 1.00 73.05 N
ATOM 17 C5 G B 725 42.088 15.980 2.718 1.00 72.46 C
ATOM 18 C6 G B 725 43.264 15.648 3.420 1.00 73.20 C
ATOM 19 O6 G B 725 43.399 15.443 4.633 1.00 79.09 O
ATOM 20 N1 G B 725 44.359 15.543 2.567 1.00 68.04 N
ATOM 21 C2 G B 725 44.321 15.726 1.205 1.00 71.97 C
ATOM 22 N2 G B 725 45.489 15.601 0.546 1.00 70.05 N
ATOM 23 N3 G B 725 43.222 16.016 0.534 1.00 72.93 N
ATOM 24 C4 G B 725 42.151 16.129 1.350 1.00 73.36 C
ATOM 25 P A B 726 38.149 12.213 -0.339 1.00 85.56 P
ATOM 26 OP1 A B 726 37.485 11.268 -1.266 1.00 81.34 O
ATOM 27 OP2 A B 726 37.415 12.718 0.846 1.00 81.84 O
ATOM 28 O5' A B 726 39.545 11.600 0.125 1.00 75.60 O
TER

Atoms:
C4: (34.275,17.567,5.279)
N3: (35.005,17.859,4.148)
OP1: (38.054,19.495,11.410)
OP2: (35.721,18.953,10.477)
C2: (36.248,18.431,4.095)
C1': (38.142,19.324,5.356)
C3': (38.479,21.078,6.956)
O5': (37.702,19.129,8.991)
O4': (38.814,18.769,6.460)
C5': (39.076,19.363,8.747)
P: (37.196,18.756,10.448)
C4': (39.262,19.828,7.334)
C2': (38.196,20.860,5.467)
O2': (39.219,21.387,4.644)
N1: (36.802,18.725,5.324)
O4: (33.153,17.071,5.164)
O2: (36.815,18.663,3.035)
C6: (36.123,18.459,6.488)
C5: (34.917,17.908,6.508)
O3': (39.324,22.219,7.188)
OP1: (33.387,16.827,-0.586)
OP2: (34.941,17.643,1.285)
C3': (39.022,14.634,-0.520)
C1': (40.398,16.516,-0.425)
C5': (36.860,15.923,0.010)
O6: (43.399,15.443,4.633)
O4': (39.044,16.954,-0.406)
C8: (40.108,16.453,2.103)
C2: (44.321,15.726,1.205)
C6: (43.264,15.648,3.420)
C5: (42.088,15.980,2.718)
C4: (42.151,16.129,1.350)
P: (34.679,17.432,-0.163)
C4': (38.159,15.852,-0.772)
C2': (40.385,15.102,-0.989)
O2': (40.504,15.137,-2.395)
N1: (44.359,15.543,2.567)
N2: (45.489,15.601,0.546)
N3: (43.222,16.016,0.534)
N7: (40.799,16.198,3.179)
N9: (40.863,16.397,0.954)
O5': (35.841,16.536,-0.795)
O3': (38.554,13.498,-1.197)
Image (generated by PyMOL):
PyMOL image
show in jmol