Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01087:02016
Extra
PDB:
ATOM 1 O3' C A1086 49.827 101.651 115.404 1.00 46.85 O
ATOM 2 P U A1087 48.632 101.382 116.440 1.00 47.27 P
ATOM 3 OP1 U A1087 49.207 101.395 117.803 1.00 47.07 O
ATOM 4 OP2 U A1087 47.907 100.178 115.959 1.00 46.84 O
ATOM 5 O5' U A1087 47.692 102.654 116.304 1.00 46.78 O
ATOM 6 C5' U A1087 48.170 103.950 116.656 1.00 47.49 C
ATOM 7 C4' U A1087 47.084 104.978 116.477 1.00 49.63 C
ATOM 8 O4' U A1087 46.829 105.183 115.057 1.00 50.76 O
ATOM 9 C3' U A1087 45.737 104.658 117.117 1.00 50.03 C
ATOM 10 O3' U A1087 45.178 105.853 117.624 1.00 50.17 O
ATOM 11 C2' U A1087 44.910 104.169 115.933 1.00 51.44 C
ATOM 12 O2' U A1087 43.529 104.381 116.111 1.00 52.45 O
ATOM 13 C1' U A1087 45.443 105.057 114.811 1.00 51.98 C
ATOM 14 N1 U A1087 45.251 104.543 113.445 1.00 52.63 N
ATOM 15 C2 U A1087 44.702 105.405 112.513 1.00 53.85 C
ATOM 16 O2 U A1087 44.364 106.547 112.781 1.00 56.94 O
ATOM 17 N3 U A1087 44.563 104.882 111.252 1.00 51.91 N
ATOM 18 C4 U A1087 44.902 103.616 110.839 1.00 52.49 C
ATOM 19 O4 U A1087 44.774 103.317 109.655 1.00 52.85 O
ATOM 20 C5 U A1087 45.451 102.781 111.859 1.00 53.49 C
ATOM 21 C6 U A1087 45.605 103.261 113.095 1.00 53.43 C
ATOM 22 P C A1088 45.350 106.199 119.178 1.00 54.03 P
ATOM 23 OP1 C A1088 44.785 107.557 119.434 1.00 51.86 O
ATOM 24 OP2 C A1088 46.775 105.921 119.521 1.00 52.56 O
ATOM 25 O5' C A1088 44.424 105.122 119.906 1.00 53.09 O
TER
ATOM 1 O3' U B2015 42.446 108.973 110.191 1.00 35.07 O
ATOM 2 P G B2016 43.653 108.301 109.368 1.00 33.41 P
ATOM 3 OP1 G B2016 43.280 106.884 109.148 1.00 34.70 O
ATOM 4 OP2 G B2016 44.930 108.630 110.040 1.00 33.82 O
ATOM 5 O5' G B2016 43.636 109.032 107.958 1.00 31.87 O
ATOM 6 C5' G B2016 42.641 108.729 106.966 1.00 29.42 C
ATOM 7 C4' G B2016 42.777 109.684 105.806 1.00 30.00 C
ATOM 8 O4' G B2016 42.685 111.044 106.304 1.00 30.02 O
ATOM 9 C3' G B2016 44.122 109.639 105.108 1.00 29.43 C
ATOM 10 O3' G B2016 44.138 108.594 104.142 1.00 31.70 O
ATOM 11 C2' G B2016 44.219 111.028 104.496 1.00 28.12 C
ATOM 12 O2' G B2016 43.447 111.181 103.337 1.00 30.64 O
ATOM 13 C1' G B2016 43.565 111.880 105.577 1.00 30.04 C
ATOM 14 N9 G B2016 44.518 112.486 106.504 1.00 33.06 N
ATOM 15 C8 G B2016 45.016 111.939 107.662 1.00 34.64 C
ATOM 16 N7 G B2016 45.887 112.708 108.258 1.00 35.58 N
ATOM 17 C5 G B2016 45.969 113.831 107.447 1.00 34.09 C
ATOM 18 C6 G B2016 46.771 114.989 107.567 1.00 34.89 C
ATOM 19 O6 G B2016 47.632 115.245 108.419 1.00 36.21 O
ATOM 20 N1 G B2016 46.509 115.898 106.547 1.00 33.03 N
ATOM 21 C2 G B2016 45.608 115.706 105.532 1.00 31.70 C
ATOM 22 N2 G B2016 45.468 116.711 104.663 1.00 31.96 N
ATOM 23 N3 G B2016 44.890 114.614 105.384 1.00 31.40 N
ATOM 24 C4 G B2016 45.115 113.723 106.373 1.00 32.83 C
ATOM 25 P C B2017 45.420 107.633 104.018 1.00 33.86 P
ATOM 26 OP1 C B2017 45.113 106.612 103.004 1.00 34.01 O
ATOM 27 OP2 C B2017 45.844 107.209 105.367 1.00 32.60 O
ATOM 28 O5' C B2017 46.537 108.585 103.417 1.00 32.30 O
TER
ATOM 2 P U A1087 48.632 101.382 116.440 1.00 47.27 P
ATOM 3 OP1 U A1087 49.207 101.395 117.803 1.00 47.07 O
ATOM 4 OP2 U A1087 47.907 100.178 115.959 1.00 46.84 O
ATOM 5 O5' U A1087 47.692 102.654 116.304 1.00 46.78 O
ATOM 6 C5' U A1087 48.170 103.950 116.656 1.00 47.49 C
ATOM 7 C4' U A1087 47.084 104.978 116.477 1.00 49.63 C
ATOM 8 O4' U A1087 46.829 105.183 115.057 1.00 50.76 O
ATOM 9 C3' U A1087 45.737 104.658 117.117 1.00 50.03 C
ATOM 10 O3' U A1087 45.178 105.853 117.624 1.00 50.17 O
ATOM 11 C2' U A1087 44.910 104.169 115.933 1.00 51.44 C
ATOM 12 O2' U A1087 43.529 104.381 116.111 1.00 52.45 O
ATOM 13 C1' U A1087 45.443 105.057 114.811 1.00 51.98 C
ATOM 14 N1 U A1087 45.251 104.543 113.445 1.00 52.63 N
ATOM 15 C2 U A1087 44.702 105.405 112.513 1.00 53.85 C
ATOM 16 O2 U A1087 44.364 106.547 112.781 1.00 56.94 O
ATOM 17 N3 U A1087 44.563 104.882 111.252 1.00 51.91 N
ATOM 18 C4 U A1087 44.902 103.616 110.839 1.00 52.49 C
ATOM 19 O4 U A1087 44.774 103.317 109.655 1.00 52.85 O
ATOM 20 C5 U A1087 45.451 102.781 111.859 1.00 53.49 C
ATOM 21 C6 U A1087 45.605 103.261 113.095 1.00 53.43 C
ATOM 22 P C A1088 45.350 106.199 119.178 1.00 54.03 P
ATOM 23 OP1 C A1088 44.785 107.557 119.434 1.00 51.86 O
ATOM 24 OP2 C A1088 46.775 105.921 119.521 1.00 52.56 O
ATOM 25 O5' C A1088 44.424 105.122 119.906 1.00 53.09 O
TER
ATOM 1 O3' U B2015 42.446 108.973 110.191 1.00 35.07 O
ATOM 2 P G B2016 43.653 108.301 109.368 1.00 33.41 P
ATOM 3 OP1 G B2016 43.280 106.884 109.148 1.00 34.70 O
ATOM 4 OP2 G B2016 44.930 108.630 110.040 1.00 33.82 O
ATOM 5 O5' G B2016 43.636 109.032 107.958 1.00 31.87 O
ATOM 6 C5' G B2016 42.641 108.729 106.966 1.00 29.42 C
ATOM 7 C4' G B2016 42.777 109.684 105.806 1.00 30.00 C
ATOM 8 O4' G B2016 42.685 111.044 106.304 1.00 30.02 O
ATOM 9 C3' G B2016 44.122 109.639 105.108 1.00 29.43 C
ATOM 10 O3' G B2016 44.138 108.594 104.142 1.00 31.70 O
ATOM 11 C2' G B2016 44.219 111.028 104.496 1.00 28.12 C
ATOM 12 O2' G B2016 43.447 111.181 103.337 1.00 30.64 O
ATOM 13 C1' G B2016 43.565 111.880 105.577 1.00 30.04 C
ATOM 14 N9 G B2016 44.518 112.486 106.504 1.00 33.06 N
ATOM 15 C8 G B2016 45.016 111.939 107.662 1.00 34.64 C
ATOM 16 N7 G B2016 45.887 112.708 108.258 1.00 35.58 N
ATOM 17 C5 G B2016 45.969 113.831 107.447 1.00 34.09 C
ATOM 18 C6 G B2016 46.771 114.989 107.567 1.00 34.89 C
ATOM 19 O6 G B2016 47.632 115.245 108.419 1.00 36.21 O
ATOM 20 N1 G B2016 46.509 115.898 106.547 1.00 33.03 N
ATOM 21 C2 G B2016 45.608 115.706 105.532 1.00 31.70 C
ATOM 22 N2 G B2016 45.468 116.711 104.663 1.00 31.96 N
ATOM 23 N3 G B2016 44.890 114.614 105.384 1.00 31.40 N
ATOM 24 C4 G B2016 45.115 113.723 106.373 1.00 32.83 C
ATOM 25 P C B2017 45.420 107.633 104.018 1.00 33.86 P
ATOM 26 OP1 C B2017 45.113 106.612 103.004 1.00 34.01 O
ATOM 27 OP2 C B2017 45.844 107.209 105.367 1.00 32.60 O
ATOM 28 O5' C B2017 46.537 108.585 103.417 1.00 32.30 O
TER
Atoms:
C4: (44.902,103.616,110.839)
N3: (44.563,104.882,111.252)
OP1: (49.207,101.395,117.803)
OP2: (47.907,100.178,115.959)
C2: (44.702,105.405,112.513)
C1': (45.443,105.057,114.811)
C3': (45.737,104.658,117.117)
O5': (47.692,102.654,116.304)
O4': (46.829,105.183,115.057)
C5': (48.170,103.950,116.656)
P: (48.632,101.382,116.440)
C4': (47.084,104.978,116.477)
C2': (44.910,104.169,115.933)
O2': (43.529,104.381,116.111)
N1: (45.251,104.543,113.445)
O4: (44.774,103.317,109.655)
O2: (44.364,106.547,112.781)
C6: (45.605,103.261,113.095)
C5: (45.451,102.781,111.859)
O3': (45.178,105.853,117.624)
N3: (44.563,104.882,111.252)
OP1: (49.207,101.395,117.803)
OP2: (47.907,100.178,115.959)
C2: (44.702,105.405,112.513)
C1': (45.443,105.057,114.811)
C3': (45.737,104.658,117.117)
O5': (47.692,102.654,116.304)
O4': (46.829,105.183,115.057)
C5': (48.170,103.950,116.656)
P: (48.632,101.382,116.440)
C4': (47.084,104.978,116.477)
C2': (44.910,104.169,115.933)
O2': (43.529,104.381,116.111)
N1: (45.251,104.543,113.445)
O4: (44.774,103.317,109.655)
O2: (44.364,106.547,112.781)
C6: (45.605,103.261,113.095)
C5: (45.451,102.781,111.859)
O3': (45.178,105.853,117.624)
OP1: (43.280,106.884,109.148)
OP2: (44.930,108.630,110.040)
C3': (44.122,109.639,105.108)
C1': (43.565,111.880,105.577)
C5': (42.641,108.729,106.966)
O6: (47.632,115.245,108.419)
O4': (42.685,111.044,106.304)
C8: (45.016,111.939,107.662)
C2: (45.608,115.706,105.532)
C6: (46.771,114.989,107.567)
C5: (45.969,113.831,107.447)
C4: (45.115,113.723,106.373)
P: (43.653,108.301,109.368)
C4': (42.777,109.684,105.806)
C2': (44.219,111.028,104.496)
O2': (43.447,111.181,103.337)
N1: (46.509,115.898,106.547)
N2: (45.468,116.711,104.663)
N3: (44.890,114.614,105.384)
N7: (45.887,112.708,108.258)
N9: (44.518,112.486,106.504)
O5': (43.636,109.032,107.958)
O3': (44.138,108.594,104.142)
OP2: (44.930,108.630,110.040)
C3': (44.122,109.639,105.108)
C1': (43.565,111.880,105.577)
C5': (42.641,108.729,106.966)
O6: (47.632,115.245,108.419)
O4': (42.685,111.044,106.304)
C8: (45.016,111.939,107.662)
C2: (45.608,115.706,105.532)
C6: (46.771,114.989,107.567)
C5: (45.969,113.831,107.447)
C4: (45.115,113.723,106.373)
P: (43.653,108.301,109.368)
C4': (42.777,109.684,105.806)
C2': (44.219,111.028,104.496)
O2': (43.447,111.181,103.337)
N1: (46.509,115.898,106.547)
N2: (45.468,116.711,104.663)
N3: (44.890,114.614,105.384)
N7: (45.887,112.708,108.258)
N9: (44.518,112.486,106.504)
O5': (43.636,109.032,107.958)
O3': (44.138,108.594,104.142)
Image (generated by PyMOL):