ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A602:A105

Extra

PDB:
ATOM 1 O3' A A 601 50.809 36.604 53.163 1.00109.78 O
ATOM 2 P G A 602 49.313 36.694 52.585 1.00109.46 P
ATOM 3 OP1 G A 602 49.220 37.719 51.509 1.00100.79 O
ATOM 4 OP2 G A 602 48.410 36.787 53.768 1.00 96.02 O
ATOM 5 O5' G A 602 49.133 35.270 51.903 1.00 96.77 O
ATOM 6 C5' G A 602 47.996 34.481 52.173 1.00 93.44 C
ATOM 7 C4' G A 602 48.406 33.093 52.565 1.00 90.17 C
ATOM 8 O4' G A 602 49.242 33.134 53.746 1.00 90.67 O
ATOM 9 C3' G A 602 47.203 32.272 52.956 1.00 87.94 C
ATOM 10 O3' G A 602 46.624 31.713 51.791 1.00 88.01 O
ATOM 11 C2' G A 602 47.778 31.273 53.949 1.00 90.86 C
ATOM 12 O2' G A 602 48.369 30.141 53.341 1.00 89.19 O
ATOM 13 C1' G A 602 48.843 32.122 54.653 1.00 93.92 C
ATOM 14 N9 G A 602 48.326 32.793 55.843 1.00 97.56 N
ATOM 15 C8 G A 602 48.295 34.149 56.061 1.00100.25 C
ATOM 16 N7 G A 602 47.748 34.475 57.198 1.00 98.90 N
ATOM 17 C5 G A 602 47.396 33.263 57.772 1.00 98.91 C
ATOM 18 C6 G A 602 46.753 32.989 58.999 1.00 98.51 C
ATOM 19 O6 G A 602 46.356 33.786 59.849 1.00 99.49 O
ATOM 20 N1 G A 602 46.578 31.626 59.196 1.00 97.11 N
ATOM 21 C2 G A 602 46.974 30.647 58.322 1.00 95.60 C
ATOM 22 N2 G A 602 46.714 29.380 58.696 1.00 91.48 N
ATOM 23 N3 G A 602 47.579 30.889 57.167 1.00 94.46 N
ATOM 24 C4 G A 602 47.754 32.211 56.957 1.00 97.67 C
ATOM 25 P C A 603 45.249 32.320 51.225 1.00 92.86 P
ATOM 26 OP1 C A 603 45.133 31.971 49.785 1.00 90.68 O
ATOM 27 OP2 C A 603 45.184 33.748 51.636 1.00 83.62 O
ATOM 28 O5' C A 603 44.142 31.505 52.029 1.00 89.62 O
TER

ATOM 1 O3' U B 104 46.740 26.591 59.319 1.00 85.63 O
ATOM 2 P G B 105 45.741 26.407 60.574 1.00 89.39 P
ATOM 3 OP1 G B 105 45.978 27.542 61.499 1.00 89.93 O
ATOM 4 OP2 G B 105 45.893 25.008 61.074 1.00 83.28 O
ATOM 5 O5' G B 105 44.283 26.548 59.931 1.00 77.80 O
ATOM 6 C5' G B 105 43.931 27.706 59.177 1.00 78.02 C
ATOM 7 C4' G B 105 42.699 27.455 58.336 1.00 73.00 C
ATOM 8 O4' G B 105 42.973 26.491 57.291 1.00 70.99 O
ATOM 9 C3' G B 105 41.485 26.880 59.042 1.00 74.23 C
ATOM 10 O3' G B 105 40.731 27.866 59.726 1.00 75.85 O
ATOM 11 C2' G B 105 40.677 26.286 57.897 1.00 72.12 C
ATOM 12 O2' G B 105 39.825 27.222 57.286 1.00 70.91 O
ATOM 13 C1' G B 105 41.765 25.851 56.919 1.00 73.18 C
ATOM 14 N9 G B 105 41.926 24.399 56.941 1.00 79.73 N
ATOM 15 C8 G B 105 42.764 23.653 57.737 1.00 79.54 C
ATOM 16 N7 G B 105 42.618 22.364 57.570 1.00 76.06 N
ATOM 17 C5 G B 105 41.635 22.250 56.594 1.00 78.68 C
ATOM 18 C6 G B 105 41.044 21.096 56.010 1.00 79.91 C
ATOM 19 O6 G B 105 41.279 19.903 56.244 1.00 79.92 O
ATOM 20 N1 G B 105 40.081 21.436 55.068 1.00 81.42 N
ATOM 21 C2 G B 105 39.727 22.715 54.724 1.00 84.65 C
ATOM 22 N2 G B 105 38.770 22.826 53.790 1.00 84.20 N
ATOM 23 N3 G B 105 40.269 23.800 55.256 1.00 84.42 N
ATOM 24 C4 G B 105 41.208 23.495 56.182 1.00 81.64 C
ATOM 25 P G B 106 39.452 27.420 60.577 1.00 75.09 P
ATOM 26 OP1 G B 106 38.950 28.603 61.307 1.00 84.60 O
ATOM 27 OP2 G B 106 39.876 26.226 61.344 1.00 70.63 O
ATOM 28 O5' G B 106 38.393 27.015 59.449 1.00 73.16 O
TER

Atoms:
OP1: (49.220,37.719,51.509)
OP2: (48.410,36.787,53.768)
C3': (47.203,32.272,52.956)
C1': (48.843,32.122,54.653)
C5': (47.996,34.481,52.173)
O6: (46.356,33.786,59.849)
O4': (49.242,33.134,53.746)
C8: (48.295,34.149,56.061)
C2: (46.974,30.647,58.322)
C6: (46.753,32.989,58.999)
C5: (47.396,33.263,57.772)
C4: (47.754,32.211,56.957)
P: (49.313,36.694,52.585)
C4': (48.406,33.093,52.565)
C2': (47.778,31.273,53.949)
O2': (48.369,30.141,53.341)
N1: (46.578,31.626,59.196)
N2: (46.714,29.380,58.696)
N3: (47.579,30.889,57.167)
N7: (47.748,34.475,57.198)
N9: (48.326,32.793,55.843)
O5': (49.133,35.270,51.903)
O3': (46.624,31.713,51.791)
OP1: (45.978,27.542,61.499)
OP2: (45.893,25.008,61.074)
C3': (41.485,26.880,59.042)
C1': (41.765,25.851,56.919)
C5': (43.931,27.706,59.177)
O6: (41.279,19.903,56.244)
O4': (42.973,26.491,57.291)
C8: (42.764,23.653,57.737)
C2: (39.727,22.715,54.724)
C6: (41.044,21.096,56.010)
C5: (41.635,22.250,56.594)
C4: (41.208,23.495,56.182)
P: (45.741,26.407,60.574)
C4': (42.699,27.455,58.336)
C2': (40.677,26.286,57.897)
O2': (39.825,27.222,57.286)
N1: (40.081,21.436,55.068)
N2: (38.770,22.826,53.790)
N3: (40.269,23.800,55.256)
N7: (42.618,22.364,57.570)
N9: (41.926,24.399,56.941)
O5': (44.283,26.548,59.931)
O3': (40.731,27.866,59.726)
Image (generated by PyMOL):
PyMOL image
show in jmol