Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A350:A335
Extra
PDB:
ATOM 1 O3' C A 349 42.355 -98.704 -67.033 1.00 57.64 O
ATOM 2 P G A 350 42.909 -98.381 -68.499 1.00 59.45 P
ATOM 3 OP1 G A 350 42.826 -96.909 -68.667 1.00 53.68 O
ATOM 4 OP2 G A 350 42.211 -99.298 -69.446 1.00 60.14 O
ATOM 5 O5' G A 350 44.451 -98.787 -68.445 1.00 58.22 O
ATOM 6 C5' G A 350 45.385 -98.330 -69.428 1.00 55.92 C
ATOM 7 C4' G A 350 46.754 -98.136 -68.801 1.00 61.01 C
ATOM 8 O4' G A 350 47.013 -99.244 -67.901 1.00 61.28 O
ATOM 9 C3' G A 350 47.931 -98.123 -69.772 1.00 62.18 C
ATOM 10 O3' G A 350 48.259 -96.835 -70.286 1.00 64.34 O
ATOM 11 C2' G A 350 49.069 -98.682 -68.934 1.00 59.69 C
ATOM 12 O2' G A 350 49.684 -97.700 -68.123 1.00 56.27 O
ATOM 13 C1' G A 350 48.334 -99.716 -68.078 1.00 63.00 C
ATOM 14 N9 G A 350 48.249-101.007 -68.762 1.00 62.56 N
ATOM 15 C8 G A 350 47.105-101.674 -69.136 1.00 56.34 C
ATOM 16 N7 G A 350 47.346-102.801 -69.744 1.00 56.43 N
ATOM 17 C5 G A 350 48.732-102.886 -69.773 1.00 53.70 C
ATOM 18 C6 G A 350 49.573-103.883 -70.297 1.00 51.00 C
ATOM 19 O6 G A 350 49.263-104.941 -70.834 1.00 54.60 O
ATOM 20 N1 G A 350 50.911-103.564 -70.132 1.00 51.04 N
ATOM 21 C2 G A 350 51.384-102.437 -69.521 1.00 56.47 C
ATOM 22 N2 G A 350 52.717-102.316 -69.455 1.00 53.41 N
ATOM 23 N3 G A 350 50.612-101.502 -69.012 1.00 56.53 N
ATOM 24 C4 G A 350 49.303-101.788 -69.174 1.00 57.67 C
ATOM 25 P U A 351 49.080 -96.728 -71.666 1.00 59.00 P
ATOM 26 OP1 U A 351 49.569 -95.339 -71.879 1.00 55.38 O
ATOM 27 OP2 U A 351 48.251 -97.385 -72.707 1.00 55.70 O
ATOM 28 O5' U A 351 50.323 -97.682 -71.432 1.00 60.84 O
TER
ATOM 1 O3' A B 334 54.928-103.486 -73.254 1.00 54.24 O
ATOM 2 P G B 335 55.579-103.459 -71.785 1.00 58.90 P
ATOM 3 OP1 G B 335 54.621-104.149 -70.880 1.00 42.34 O
ATOM 4 OP2 G B 335 55.994-102.066 -71.492 1.00 61.95 O
ATOM 5 O5' G B 335 56.936-104.292 -71.896 1.00 59.82 O
ATOM 6 C5' G B 335 57.041-105.590 -71.329 1.00 55.10 C
ATOM 7 C4' G B 335 58.271-105.698 -70.454 1.00 46.80 C
ATOM 8 O4' G B 335 58.237-107.016 -69.860 1.00 48.40 O
ATOM 9 C3' G B 335 59.621-105.579 -71.170 1.00 46.50 C
ATOM 10 O3' G B 335 60.625-105.055 -70.303 1.00 43.38 O
ATOM 11 C2' G B 335 60.007-107.031 -71.407 1.00 48.37 C
ATOM 12 O2' G B 335 61.402-107.239 -71.499 1.00 47.06 O
ATOM 13 C1' G B 335 59.433-107.696 -70.159 1.00 53.76 C
ATOM 14 N9 G B 335 59.132-109.101 -70.373 1.00 53.57 N
ATOM 15 C8 G B 335 59.784-110.176 -69.819 1.00 47.05 C
ATOM 16 N7 G B 335 59.324-111.320 -70.238 1.00 52.05 N
ATOM 17 C5 G B 335 58.299-110.976 -71.107 1.00 54.62 C
ATOM 18 C6 G B 335 57.445-111.791 -71.874 1.00 56.74 C
ATOM 19 O6 G B 335 57.414-113.021 -71.941 1.00 55.54 O
ATOM 20 N1 G B 335 56.560-111.033 -72.633 1.00 59.39 N
ATOM 21 C2 G B 335 56.511-109.660 -72.656 1.00 60.51 C
ATOM 22 N2 G B 335 55.613-109.111 -73.496 1.00 62.33 N
ATOM 23 N3 G B 335 57.293-108.887 -71.926 1.00 56.86 N
ATOM 24 C4 G B 335 58.162-109.609 -71.187 1.00 55.18 C
ATOM 25 P A B 336 60.943-103.485 -70.282 1.00 49.41 P
ATOM 26 OP1 A B 336 60.302-102.812 -71.454 1.00 48.72 O
ATOM 27 OP2 A B 336 62.400-103.327 -70.055 1.00 47.04 O
ATOM 28 O5' A B 336 60.207-103.010 -68.951 1.00 59.64 O
TER
ATOM 2 P G A 350 42.909 -98.381 -68.499 1.00 59.45 P
ATOM 3 OP1 G A 350 42.826 -96.909 -68.667 1.00 53.68 O
ATOM 4 OP2 G A 350 42.211 -99.298 -69.446 1.00 60.14 O
ATOM 5 O5' G A 350 44.451 -98.787 -68.445 1.00 58.22 O
ATOM 6 C5' G A 350 45.385 -98.330 -69.428 1.00 55.92 C
ATOM 7 C4' G A 350 46.754 -98.136 -68.801 1.00 61.01 C
ATOM 8 O4' G A 350 47.013 -99.244 -67.901 1.00 61.28 O
ATOM 9 C3' G A 350 47.931 -98.123 -69.772 1.00 62.18 C
ATOM 10 O3' G A 350 48.259 -96.835 -70.286 1.00 64.34 O
ATOM 11 C2' G A 350 49.069 -98.682 -68.934 1.00 59.69 C
ATOM 12 O2' G A 350 49.684 -97.700 -68.123 1.00 56.27 O
ATOM 13 C1' G A 350 48.334 -99.716 -68.078 1.00 63.00 C
ATOM 14 N9 G A 350 48.249-101.007 -68.762 1.00 62.56 N
ATOM 15 C8 G A 350 47.105-101.674 -69.136 1.00 56.34 C
ATOM 16 N7 G A 350 47.346-102.801 -69.744 1.00 56.43 N
ATOM 17 C5 G A 350 48.732-102.886 -69.773 1.00 53.70 C
ATOM 18 C6 G A 350 49.573-103.883 -70.297 1.00 51.00 C
ATOM 19 O6 G A 350 49.263-104.941 -70.834 1.00 54.60 O
ATOM 20 N1 G A 350 50.911-103.564 -70.132 1.00 51.04 N
ATOM 21 C2 G A 350 51.384-102.437 -69.521 1.00 56.47 C
ATOM 22 N2 G A 350 52.717-102.316 -69.455 1.00 53.41 N
ATOM 23 N3 G A 350 50.612-101.502 -69.012 1.00 56.53 N
ATOM 24 C4 G A 350 49.303-101.788 -69.174 1.00 57.67 C
ATOM 25 P U A 351 49.080 -96.728 -71.666 1.00 59.00 P
ATOM 26 OP1 U A 351 49.569 -95.339 -71.879 1.00 55.38 O
ATOM 27 OP2 U A 351 48.251 -97.385 -72.707 1.00 55.70 O
ATOM 28 O5' U A 351 50.323 -97.682 -71.432 1.00 60.84 O
TER
ATOM 1 O3' A B 334 54.928-103.486 -73.254 1.00 54.24 O
ATOM 2 P G B 335 55.579-103.459 -71.785 1.00 58.90 P
ATOM 3 OP1 G B 335 54.621-104.149 -70.880 1.00 42.34 O
ATOM 4 OP2 G B 335 55.994-102.066 -71.492 1.00 61.95 O
ATOM 5 O5' G B 335 56.936-104.292 -71.896 1.00 59.82 O
ATOM 6 C5' G B 335 57.041-105.590 -71.329 1.00 55.10 C
ATOM 7 C4' G B 335 58.271-105.698 -70.454 1.00 46.80 C
ATOM 8 O4' G B 335 58.237-107.016 -69.860 1.00 48.40 O
ATOM 9 C3' G B 335 59.621-105.579 -71.170 1.00 46.50 C
ATOM 10 O3' G B 335 60.625-105.055 -70.303 1.00 43.38 O
ATOM 11 C2' G B 335 60.007-107.031 -71.407 1.00 48.37 C
ATOM 12 O2' G B 335 61.402-107.239 -71.499 1.00 47.06 O
ATOM 13 C1' G B 335 59.433-107.696 -70.159 1.00 53.76 C
ATOM 14 N9 G B 335 59.132-109.101 -70.373 1.00 53.57 N
ATOM 15 C8 G B 335 59.784-110.176 -69.819 1.00 47.05 C
ATOM 16 N7 G B 335 59.324-111.320 -70.238 1.00 52.05 N
ATOM 17 C5 G B 335 58.299-110.976 -71.107 1.00 54.62 C
ATOM 18 C6 G B 335 57.445-111.791 -71.874 1.00 56.74 C
ATOM 19 O6 G B 335 57.414-113.021 -71.941 1.00 55.54 O
ATOM 20 N1 G B 335 56.560-111.033 -72.633 1.00 59.39 N
ATOM 21 C2 G B 335 56.511-109.660 -72.656 1.00 60.51 C
ATOM 22 N2 G B 335 55.613-109.111 -73.496 1.00 62.33 N
ATOM 23 N3 G B 335 57.293-108.887 -71.926 1.00 56.86 N
ATOM 24 C4 G B 335 58.162-109.609 -71.187 1.00 55.18 C
ATOM 25 P A B 336 60.943-103.485 -70.282 1.00 49.41 P
ATOM 26 OP1 A B 336 60.302-102.812 -71.454 1.00 48.72 O
ATOM 27 OP2 A B 336 62.400-103.327 -70.055 1.00 47.04 O
ATOM 28 O5' A B 336 60.207-103.010 -68.951 1.00 59.64 O
TER
Atoms:
OP1: (42.826,-96.909,-68.667)
OP2: (42.211,-99.298,-69.446)
C3': (47.931,-98.123,-69.772)
C1': (48.334,-99.716,-68.078)
C5': (45.385,-98.330,-69.428)
O6: (49.263,-104.941,-70.834)
O4': (47.013,-99.244,-67.901)
C8: (47.105,-101.674,-69.136)
C2: (51.384,-102.437,-69.521)
C6: (49.573,-103.883,-70.297)
C5: (48.732,-102.886,-69.773)
C4: (49.303,-101.788,-69.174)
P: (42.909,-98.381,-68.499)
C4': (46.754,-98.136,-68.801)
C2': (49.069,-98.682,-68.934)
O2': (49.684,-97.700,-68.123)
N1: (50.911,-103.564,-70.132)
N2: (52.717,-102.316,-69.455)
N3: (50.612,-101.502,-69.012)
N7: (47.346,-102.801,-69.744)
N9: (48.249,-101.007,-68.762)
O5': (44.451,-98.787,-68.445)
O3': (48.259,-96.835,-70.286)
OP2: (42.211,-99.298,-69.446)
C3': (47.931,-98.123,-69.772)
C1': (48.334,-99.716,-68.078)
C5': (45.385,-98.330,-69.428)
O6: (49.263,-104.941,-70.834)
O4': (47.013,-99.244,-67.901)
C8: (47.105,-101.674,-69.136)
C2: (51.384,-102.437,-69.521)
C6: (49.573,-103.883,-70.297)
C5: (48.732,-102.886,-69.773)
C4: (49.303,-101.788,-69.174)
P: (42.909,-98.381,-68.499)
C4': (46.754,-98.136,-68.801)
C2': (49.069,-98.682,-68.934)
O2': (49.684,-97.700,-68.123)
N1: (50.911,-103.564,-70.132)
N2: (52.717,-102.316,-69.455)
N3: (50.612,-101.502,-69.012)
N7: (47.346,-102.801,-69.744)
N9: (48.249,-101.007,-68.762)
O5': (44.451,-98.787,-68.445)
O3': (48.259,-96.835,-70.286)
OP1: (54.621,-104.149,-70.880)
OP2: (55.994,-102.066,-71.492)
C3': (59.621,-105.579,-71.170)
C1': (59.433,-107.696,-70.159)
C5': (57.041,-105.590,-71.329)
O6: (57.414,-113.021,-71.941)
O4': (58.237,-107.016,-69.860)
C8: (59.784,-110.176,-69.819)
C2: (56.511,-109.660,-72.656)
C6: (57.445,-111.791,-71.874)
C5: (58.299,-110.976,-71.107)
C4: (58.162,-109.609,-71.187)
P: (55.579,-103.459,-71.785)
C4': (58.271,-105.698,-70.454)
C2': (60.007,-107.031,-71.407)
O2': (61.402,-107.239,-71.499)
N1: (56.560,-111.033,-72.633)
N2: (55.613,-109.111,-73.496)
N3: (57.293,-108.887,-71.926)
N7: (59.324,-111.320,-70.238)
N9: (59.132,-109.101,-70.373)
O5': (56.936,-104.292,-71.896)
O3': (60.625,-105.055,-70.303)
OP2: (55.994,-102.066,-71.492)
C3': (59.621,-105.579,-71.170)
C1': (59.433,-107.696,-70.159)
C5': (57.041,-105.590,-71.329)
O6: (57.414,-113.021,-71.941)
O4': (58.237,-107.016,-69.860)
C8: (59.784,-110.176,-69.819)
C2: (56.511,-109.660,-72.656)
C6: (57.445,-111.791,-71.874)
C5: (58.299,-110.976,-71.107)
C4: (58.162,-109.609,-71.187)
P: (55.579,-103.459,-71.785)
C4': (58.271,-105.698,-70.454)
C2': (60.007,-107.031,-71.407)
O2': (61.402,-107.239,-71.499)
N1: (56.560,-111.033,-72.633)
N2: (55.613,-109.111,-73.496)
N3: (57.293,-108.887,-71.926)
N7: (59.324,-111.320,-70.238)
N9: (59.132,-109.101,-70.373)
O5': (56.936,-104.292,-71.896)
O3': (60.625,-105.055,-70.303)
Image (generated by PyMOL):