ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1420:A1471

Extra

PDB:
ATOM 1 O3' A A1419 3.568 -37.649 -14.432 1.00 48.12 O
ATOM 2 P G A1420 3.066 -36.181 -14.838 1.00 53.07 P
ATOM 3 OP1 G A1420 3.930 -35.720 -15.933 1.00 58.25 O
ATOM 4 OP2 G A1420 3.010 -35.380 -13.599 1.00 59.97 O
ATOM 5 O5' G A1420 1.591 -36.441 -15.379 1.00 56.60 O
ATOM 6 C5' G A1420 1.328 -36.633 -16.760 1.00 52.51 C
ATOM 7 C4' G A1420 -0.151 -36.745 -17.007 1.00 55.90 C
ATOM 8 O4' G A1420 -0.743 -37.573 -15.972 1.00 63.77 O
ATOM 9 C3' G A1420 -0.930 -35.439 -16.938 1.00 61.53 C
ATOM 10 O3' G A1420 -0.920 -34.730 -18.166 1.00 60.91 O
ATOM 11 C2' G A1420 -2.327 -35.880 -16.496 1.00 61.09 C
ATOM 12 O2' G A1420 -3.079 -36.341 -17.601 1.00 54.16 O
ATOM 13 C1' G A1420 -2.012 -37.075 -15.602 1.00 64.83 C
ATOM 14 N9 G A1420 -1.972 -36.719 -14.171 1.00 66.38 N
ATOM 15 C8 G A1420 -0.830 -36.580 -13.419 1.00 66.41 C
ATOM 16 N7 G A1420 -1.063 -36.286 -12.171 1.00 72.74 N
ATOM 17 C5 G A1420 -2.449 -36.242 -12.089 1.00 71.39 C
ATOM 18 C6 G A1420 -3.276 -35.969 -10.973 1.00 71.85 C
ATOM 19 O6 G A1420 -2.953 -35.704 -9.800 1.00 74.09 O
ATOM 20 N1 G A1420 -4.612 -36.026 -11.345 1.00 78.30 N
ATOM 21 C2 G A1420 -5.096 -36.309 -12.600 1.00 75.42 C
ATOM 22 N2 G A1420 -6.431 -36.312 -12.736 1.00 76.74 N
ATOM 23 N3 G A1420 -4.329 -36.565 -13.643 1.00 71.33 N
ATOM 24 C4 G A1420 -3.027 -36.518 -13.313 1.00 68.21 C
ATOM 25 P A A1421 -0.099 -33.356 -18.310 1.00 49.75 P
ATOM 26 OP1 A A1421 1.316 -33.665 -18.048 1.00 81.60 O
ATOM 27 OP2 A A1421 -0.772 -32.331 -17.470 1.00 69.77 O
ATOM 28 O5' A A1421 -0.301 -33.005 -19.827 1.00 57.09 O
TER

ATOM 1 O3' G B1470 -9.286 -33.510 -12.322 1.00 86.69 O
ATOM 2 P G B1471 -9.700 -34.830 -11.515 1.00 98.59 P
ATOM 3 OP1 G B1471 -10.575 -34.398 -10.397 1.00 78.78 O
ATOM 4 OP2 G B1471 -8.446 -35.554 -11.193 1.00 76.74 O
ATOM 5 O5' G B1471 -10.548 -35.656 -12.599 1.00106.37 O
ATOM 6 C5' G B1471 -11.954 -35.477 -12.729 1.00106.28 C
ATOM 7 C4' G B1471 -12.426 -35.733 -14.140 1.00100.41 C
ATOM 8 O4' G B1471 -11.645 -34.941 -15.064 1.00 93.43 O
ATOM 9 C3' G B1471 -12.281 -37.160 -14.655 1.00102.85 C
ATOM 10 O3' G B1471 -13.338 -38.004 -14.248 1.00107.30 O
ATOM 11 C2' G B1471 -12.233 -36.963 -16.155 1.00 99.69 C
ATOM 12 O2' G B1471 -13.538 -36.767 -16.671 1.00 96.29 O
ATOM 13 C1' G B1471 -11.458 -35.650 -16.264 1.00 98.69 C
ATOM 14 N9 G B1471 -10.018 -35.892 -16.440 1.00 91.10 N
ATOM 15 C8 G B1471 -9.107 -36.153 -15.450 1.00 90.73 C
ATOM 16 N7 G B1471 -7.902 -36.353 -15.912 1.00 89.10 N
ATOM 17 C5 G B1471 -8.030 -36.228 -17.290 1.00 87.01 C
ATOM 18 C6 G B1471 -7.072 -36.345 -18.330 1.00 86.56 C
ATOM 19 O6 G B1471 -5.867 -36.592 -18.249 1.00 96.26 O
ATOM 20 N1 G B1471 -7.622 -36.146 -19.586 1.00 84.56 N
ATOM 21 C2 G B1471 -8.943 -35.868 -19.818 1.00 91.36 C
ATOM 22 N2 G B1471 -9.306 -35.705 -21.103 1.00 91.99 N
ATOM 23 N3 G B1471 -9.847 -35.757 -18.858 1.00 91.65 N
ATOM 24 C4 G B1471 -9.329 -35.946 -17.630 1.00 87.54 C
ATOM 25 P U B1472 -13.152 -39.003 -13.007 1.00 94.37 P
ATOM 26 OP1 U B1472 -14.497 -39.510 -12.656 1.00118.12 O
ATOM 27 OP2 U B1472 -12.381 -38.282 -11.977 1.00111.76 O
ATOM 28 O5' U B1472 -12.268 -40.176 -13.623 1.00 92.27 O
TER

Atoms:
OP1: (3.930,-35.720,-15.933)
OP2: (3.010,-35.380,-13.599)
C3': (-0.930,-35.439,-16.938)
C1': (-2.012,-37.075,-15.602)
C5': (1.328,-36.633,-16.760)
O6: (-2.953,-35.704,-9.800)
O4': (-0.743,-37.573,-15.972)
C8: (-0.830,-36.580,-13.419)
C2: (-5.096,-36.309,-12.600)
C6: (-3.276,-35.969,-10.973)
C5: (-2.449,-36.242,-12.089)
C4: (-3.027,-36.518,-13.313)
P: (3.066,-36.181,-14.838)
C4': (-0.151,-36.745,-17.007)
C2': (-2.327,-35.880,-16.496)
O2': (-3.079,-36.341,-17.601)
N1: (-4.612,-36.026,-11.345)
N2: (-6.431,-36.312,-12.736)
N3: (-4.329,-36.565,-13.643)
N7: (-1.063,-36.286,-12.171)
N9: (-1.972,-36.719,-14.171)
O5': (1.591,-36.441,-15.379)
O3': (-0.920,-34.730,-18.166)
OP1: (-10.575,-34.398,-10.397)
OP2: (-8.446,-35.554,-11.193)
C3': (-12.281,-37.160,-14.655)
C1': (-11.458,-35.650,-16.264)
C5': (-11.954,-35.477,-12.729)
O6: (-5.867,-36.592,-18.249)
O4': (-11.645,-34.941,-15.064)
C8: (-9.107,-36.153,-15.450)
C2: (-8.943,-35.868,-19.818)
C6: (-7.072,-36.345,-18.330)
C5: (-8.030,-36.228,-17.290)
C4: (-9.329,-35.946,-17.630)
P: (-9.700,-34.830,-11.515)
C4': (-12.426,-35.733,-14.140)
C2': (-12.233,-36.963,-16.155)
O2': (-13.538,-36.767,-16.671)
N1: (-7.622,-36.146,-19.586)
N2: (-9.306,-35.705,-21.103)
N3: (-9.847,-35.757,-18.858)
N7: (-7.902,-36.353,-15.912)
N9: (-10.018,-35.892,-16.440)
O5': (-10.548,-35.656,-12.599)
O3': (-13.338,-38.004,-14.248)
Image (generated by PyMOL):
PyMOL image
show in jmol