Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A350:A335
Extra
PDB:
ATOM 1 O3' C A 349 42.899 -98.028 -65.846 1.00 55.69 O
ATOM 2 P G A 350 43.261 -97.722 -67.362 1.00 58.42 P
ATOM 3 OP1 G A 350 42.314 -96.681 -67.837 1.00 85.17 O
ATOM 4 OP2 G A 350 43.307 -99.033 -68.075 1.00 70.60 O
ATOM 5 O5' G A 350 44.711 -97.111 -67.244 1.00 44.03 O
ATOM 6 C5' G A 350 45.673 -97.313 -68.259 1.00 39.57 C
ATOM 7 C4' G A 350 47.052 -97.397 -67.675 1.00 44.07 C
ATOM 8 O4' G A 350 47.213 -98.663 -66.982 1.00 46.27 O
ATOM 9 C3' G A 350 48.215 -97.364 -68.662 1.00 47.83 C
ATOM 10 O3' G A 350 48.545 -96.044 -69.092 1.00 46.06 O
ATOM 11 C2' G A 350 49.319 -98.014 -67.857 1.00 50.90 C
ATOM 12 O2' G A 350 49.816 -97.085 -66.905 1.00 53.65 O
ATOM 13 C1' G A 350 48.544 -99.101 -67.100 1.00 51.32 C
ATOM 14 N9 G A 350 48.544-100.395 -67.802 1.00 49.22 N
ATOM 15 C8 G A 350 47.409-101.008 -68.236 1.00 48.59 C
ATOM 16 N7 G A 350 47.634-102.145 -68.820 1.00 50.47 N
ATOM 17 C5 G A 350 49.003-102.305 -68.759 1.00 54.94 C
ATOM 18 C6 G A 350 49.804-103.370 -69.248 1.00 62.26 C
ATOM 19 O6 G A 350 49.444-104.397 -69.830 1.00 70.92 O
ATOM 20 N1 G A 350 51.144-103.167 -68.999 1.00 53.37 N
ATOM 21 C2 G A 350 51.625-102.057 -68.363 1.00 56.50 C
ATOM 22 N2 G A 350 52.951-102.045 -68.230 1.00 63.66 N
ATOM 23 N3 G A 350 50.898-101.047 -67.895 1.00 47.99 N
ATOM 24 C4 G A 350 49.587-101.237 -68.123 1.00 50.03 C
ATOM 25 P U A 351 49.273 -95.794 -70.511 1.00 37.96 P
ATOM 26 OP1 U A 351 49.714 -94.390 -70.532 1.00 48.17 O
ATOM 27 OP2 U A 351 48.346 -96.262 -71.581 1.00 69.09 O
ATOM 28 O5' U A 351 50.509 -96.755 -70.427 1.00 41.45 O
TER
ATOM 1 O3' A B 334 55.304-103.519 -71.888 1.00 55.50 O
ATOM 2 P G B 335 56.110-102.597 -70.811 1.00 55.28 P
ATOM 3 OP1 G B 335 55.318-102.631 -69.565 1.00 50.85 O
ATOM 4 OP2 G B 335 56.384-101.290 -71.438 1.00 46.19 O
ATOM 5 O5' G B 335 57.471-103.374 -70.598 1.00 45.25 O
ATOM 6 C5' G B 335 57.466-104.752 -70.257 1.00 44.64 C
ATOM 7 C4' G B 335 58.603-105.109 -69.340 1.00 43.86 C
ATOM 8 O4' G B 335 58.412-106.472 -68.870 1.00 41.33 O
ATOM 9 C3' G B 335 60.005-105.053 -69.977 1.00 53.39 C
ATOM 10 O3' G B 335 60.953-104.497 -69.057 1.00 50.37 O
ATOM 11 C2' G B 335 60.344-106.520 -70.218 1.00 52.66 C
ATOM 12 O2' G B 335 61.717-106.802 -70.168 1.00 45.50 O
ATOM 13 C1' G B 335 59.592-107.223 -69.086 1.00 50.20 C
ATOM 14 N9 G B 335 59.231-108.614 -69.392 1.00 47.41 N
ATOM 15 C8 G B 335 59.927-109.716 -68.993 1.00 48.96 C
ATOM 16 N7 G B 335 59.413-110.828 -69.430 1.00 55.56 N
ATOM 17 C5 G B 335 58.316-110.445 -70.178 1.00 51.97 C
ATOM 18 C6 G B 335 57.384-111.219 -70.905 1.00 51.97 C
ATOM 19 O6 G B 335 57.320-112.440 -71.041 1.00 59.14 O
ATOM 20 N1 G B 335 56.441-110.440 -71.529 1.00 49.27 N
ATOM 21 C2 G B 335 56.392-109.085 -71.467 1.00 54.65 C
ATOM 22 N2 G B 335 55.371-108.528 -72.146 1.00 58.26 N
ATOM 23 N3 G B 335 57.259-108.347 -70.793 1.00 49.77 N
ATOM 24 C4 G B 335 58.196-109.084 -70.174 1.00 47.08 C
ATOM 25 P A B 336 61.384-102.951 -69.156 1.00 44.80 P
ATOM 26 OP1 A B 336 60.818-102.410 -70.411 1.00 64.32 O
ATOM 27 OP2 A B 336 62.830-102.896 -68.951 1.00 56.09 O
ATOM 28 O5' A B 336 60.642-102.283 -67.917 1.00 58.98 O
TER
ATOM 2 P G A 350 43.261 -97.722 -67.362 1.00 58.42 P
ATOM 3 OP1 G A 350 42.314 -96.681 -67.837 1.00 85.17 O
ATOM 4 OP2 G A 350 43.307 -99.033 -68.075 1.00 70.60 O
ATOM 5 O5' G A 350 44.711 -97.111 -67.244 1.00 44.03 O
ATOM 6 C5' G A 350 45.673 -97.313 -68.259 1.00 39.57 C
ATOM 7 C4' G A 350 47.052 -97.397 -67.675 1.00 44.07 C
ATOM 8 O4' G A 350 47.213 -98.663 -66.982 1.00 46.27 O
ATOM 9 C3' G A 350 48.215 -97.364 -68.662 1.00 47.83 C
ATOM 10 O3' G A 350 48.545 -96.044 -69.092 1.00 46.06 O
ATOM 11 C2' G A 350 49.319 -98.014 -67.857 1.00 50.90 C
ATOM 12 O2' G A 350 49.816 -97.085 -66.905 1.00 53.65 O
ATOM 13 C1' G A 350 48.544 -99.101 -67.100 1.00 51.32 C
ATOM 14 N9 G A 350 48.544-100.395 -67.802 1.00 49.22 N
ATOM 15 C8 G A 350 47.409-101.008 -68.236 1.00 48.59 C
ATOM 16 N7 G A 350 47.634-102.145 -68.820 1.00 50.47 N
ATOM 17 C5 G A 350 49.003-102.305 -68.759 1.00 54.94 C
ATOM 18 C6 G A 350 49.804-103.370 -69.248 1.00 62.26 C
ATOM 19 O6 G A 350 49.444-104.397 -69.830 1.00 70.92 O
ATOM 20 N1 G A 350 51.144-103.167 -68.999 1.00 53.37 N
ATOM 21 C2 G A 350 51.625-102.057 -68.363 1.00 56.50 C
ATOM 22 N2 G A 350 52.951-102.045 -68.230 1.00 63.66 N
ATOM 23 N3 G A 350 50.898-101.047 -67.895 1.00 47.99 N
ATOM 24 C4 G A 350 49.587-101.237 -68.123 1.00 50.03 C
ATOM 25 P U A 351 49.273 -95.794 -70.511 1.00 37.96 P
ATOM 26 OP1 U A 351 49.714 -94.390 -70.532 1.00 48.17 O
ATOM 27 OP2 U A 351 48.346 -96.262 -71.581 1.00 69.09 O
ATOM 28 O5' U A 351 50.509 -96.755 -70.427 1.00 41.45 O
TER
ATOM 1 O3' A B 334 55.304-103.519 -71.888 1.00 55.50 O
ATOM 2 P G B 335 56.110-102.597 -70.811 1.00 55.28 P
ATOM 3 OP1 G B 335 55.318-102.631 -69.565 1.00 50.85 O
ATOM 4 OP2 G B 335 56.384-101.290 -71.438 1.00 46.19 O
ATOM 5 O5' G B 335 57.471-103.374 -70.598 1.00 45.25 O
ATOM 6 C5' G B 335 57.466-104.752 -70.257 1.00 44.64 C
ATOM 7 C4' G B 335 58.603-105.109 -69.340 1.00 43.86 C
ATOM 8 O4' G B 335 58.412-106.472 -68.870 1.00 41.33 O
ATOM 9 C3' G B 335 60.005-105.053 -69.977 1.00 53.39 C
ATOM 10 O3' G B 335 60.953-104.497 -69.057 1.00 50.37 O
ATOM 11 C2' G B 335 60.344-106.520 -70.218 1.00 52.66 C
ATOM 12 O2' G B 335 61.717-106.802 -70.168 1.00 45.50 O
ATOM 13 C1' G B 335 59.592-107.223 -69.086 1.00 50.20 C
ATOM 14 N9 G B 335 59.231-108.614 -69.392 1.00 47.41 N
ATOM 15 C8 G B 335 59.927-109.716 -68.993 1.00 48.96 C
ATOM 16 N7 G B 335 59.413-110.828 -69.430 1.00 55.56 N
ATOM 17 C5 G B 335 58.316-110.445 -70.178 1.00 51.97 C
ATOM 18 C6 G B 335 57.384-111.219 -70.905 1.00 51.97 C
ATOM 19 O6 G B 335 57.320-112.440 -71.041 1.00 59.14 O
ATOM 20 N1 G B 335 56.441-110.440 -71.529 1.00 49.27 N
ATOM 21 C2 G B 335 56.392-109.085 -71.467 1.00 54.65 C
ATOM 22 N2 G B 335 55.371-108.528 -72.146 1.00 58.26 N
ATOM 23 N3 G B 335 57.259-108.347 -70.793 1.00 49.77 N
ATOM 24 C4 G B 335 58.196-109.084 -70.174 1.00 47.08 C
ATOM 25 P A B 336 61.384-102.951 -69.156 1.00 44.80 P
ATOM 26 OP1 A B 336 60.818-102.410 -70.411 1.00 64.32 O
ATOM 27 OP2 A B 336 62.830-102.896 -68.951 1.00 56.09 O
ATOM 28 O5' A B 336 60.642-102.283 -67.917 1.00 58.98 O
TER
Atoms:
OP1: (42.314,-96.681,-67.837)
OP2: (43.307,-99.033,-68.075)
C3': (48.215,-97.364,-68.662)
C1': (48.544,-99.101,-67.100)
C5': (45.673,-97.313,-68.259)
O6: (49.444,-104.397,-69.830)
O4': (47.213,-98.663,-66.982)
C8: (47.409,-101.008,-68.236)
C2: (51.625,-102.057,-68.363)
C6: (49.804,-103.370,-69.248)
C5: (49.003,-102.305,-68.759)
C4: (49.587,-101.237,-68.123)
P: (43.261,-97.722,-67.362)
C4': (47.052,-97.397,-67.675)
C2': (49.319,-98.014,-67.857)
O2': (49.816,-97.085,-66.905)
N1: (51.144,-103.167,-68.999)
N2: (52.951,-102.045,-68.230)
N3: (50.898,-101.047,-67.895)
N7: (47.634,-102.145,-68.820)
N9: (48.544,-100.395,-67.802)
O5': (44.711,-97.111,-67.244)
O3': (48.545,-96.044,-69.092)
OP2: (43.307,-99.033,-68.075)
C3': (48.215,-97.364,-68.662)
C1': (48.544,-99.101,-67.100)
C5': (45.673,-97.313,-68.259)
O6: (49.444,-104.397,-69.830)
O4': (47.213,-98.663,-66.982)
C8: (47.409,-101.008,-68.236)
C2: (51.625,-102.057,-68.363)
C6: (49.804,-103.370,-69.248)
C5: (49.003,-102.305,-68.759)
C4: (49.587,-101.237,-68.123)
P: (43.261,-97.722,-67.362)
C4': (47.052,-97.397,-67.675)
C2': (49.319,-98.014,-67.857)
O2': (49.816,-97.085,-66.905)
N1: (51.144,-103.167,-68.999)
N2: (52.951,-102.045,-68.230)
N3: (50.898,-101.047,-67.895)
N7: (47.634,-102.145,-68.820)
N9: (48.544,-100.395,-67.802)
O5': (44.711,-97.111,-67.244)
O3': (48.545,-96.044,-69.092)
OP1: (55.318,-102.631,-69.565)
OP2: (56.384,-101.290,-71.438)
C3': (60.005,-105.053,-69.977)
C1': (59.592,-107.223,-69.086)
C5': (57.466,-104.752,-70.257)
O6: (57.320,-112.440,-71.041)
O4': (58.412,-106.472,-68.870)
C8: (59.927,-109.716,-68.993)
C2: (56.392,-109.085,-71.467)
C6: (57.384,-111.219,-70.905)
C5: (58.316,-110.445,-70.178)
C4: (58.196,-109.084,-70.174)
P: (56.110,-102.597,-70.811)
C4': (58.603,-105.109,-69.340)
C2': (60.344,-106.520,-70.218)
O2': (61.717,-106.802,-70.168)
N1: (56.441,-110.440,-71.529)
N2: (55.371,-108.528,-72.146)
N3: (57.259,-108.347,-70.793)
N7: (59.413,-110.828,-69.430)
N9: (59.231,-108.614,-69.392)
O5': (57.471,-103.374,-70.598)
O3': (60.953,-104.497,-69.057)
OP2: (56.384,-101.290,-71.438)
C3': (60.005,-105.053,-69.977)
C1': (59.592,-107.223,-69.086)
C5': (57.466,-104.752,-70.257)
O6: (57.320,-112.440,-71.041)
O4': (58.412,-106.472,-68.870)
C8: (59.927,-109.716,-68.993)
C2: (56.392,-109.085,-71.467)
C6: (57.384,-111.219,-70.905)
C5: (58.316,-110.445,-70.178)
C4: (58.196,-109.084,-70.174)
P: (56.110,-102.597,-70.811)
C4': (58.603,-105.109,-69.340)
C2': (60.344,-106.520,-70.218)
O2': (61.717,-106.802,-70.168)
N1: (56.441,-110.440,-71.529)
N2: (55.371,-108.528,-72.146)
N3: (57.259,-108.347,-70.793)
N7: (59.413,-110.828,-69.430)
N9: (59.231,-108.614,-69.392)
O5': (57.471,-103.374,-70.598)
O3': (60.953,-104.497,-69.057)
Image (generated by PyMOL):