Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DLC:Y57:Y17
Extra
PDB:
ATOM 1 O3' C A 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 2 P U A 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U A 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U A 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U A 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U A 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U A 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U A 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U A 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U A 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U A 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U A 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U A 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U A 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U A 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U A 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U A 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U A 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U A 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U A 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U A 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
TER
ATOM 1 P G B 17 5.147 -7.996 124.117 1.00 32.10 P
ATOM 2 OP1 G B 17 5.397 -7.087 125.258 1.00 32.02 O
ATOM 3 OP2 G B 17 4.137 -9.071 124.236 1.00 31.85 O
ATOM 4 O5' G B 17 4.761 -7.126 122.830 1.00 32.22 O
ATOM 5 C5' G B 17 5.579 -6.045 122.378 1.00 32.35 C
ATOM 6 C4' G B 17 5.252 -5.654 120.941 1.00 32.50 C
ATOM 7 O4' G B 17 5.964 -6.518 120.017 1.00 32.47 O
ATOM 8 C3' G B 17 3.780 -5.721 120.535 1.00 32.58 C
ATOM 9 O3' G B 17 3.451 -4.600 119.715 1.00 32.57 O
ATOM 10 C2' G B 17 3.693 -7.040 119.762 1.00 32.76 C
ATOM 11 O2' G B 17 2.658 -7.049 118.798 1.00 32.97 O
ATOM 12 C1' G B 17 5.062 -7.088 119.087 1.00 32.74 C
ATOM 13 N9 G B 17 5.580 -8.418 118.756 1.00 32.72 N
ATOM 14 C8 G B 17 5.144 -9.640 119.220 1.00 32.71 C
ATOM 15 N7 G B 17 5.817 -10.652 118.748 1.00 32.51 N
ATOM 16 C5 G B 17 6.767 -10.068 117.921 1.00 32.53 C
ATOM 17 C6 G B 17 7.783 -10.665 117.136 1.00 32.46 C
ATOM 18 O6 G B 17 8.043 -11.869 117.022 1.00 32.78 O
ATOM 19 N1 G B 17 8.539 -9.719 116.438 1.00 32.33 N
ATOM 20 C2 G B 17 8.333 -8.358 116.495 1.00 32.30 C
ATOM 21 N2 G B 17 9.154 -7.595 115.760 1.00 32.19 N
ATOM 22 N3 G B 17 7.383 -7.786 117.228 1.00 32.46 N
ATOM 23 C4 G B 17 6.636 -8.695 117.913 1.00 32.59 C
TER
ATOM 2 P U A 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U A 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U A 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U A 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U A 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U A 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U A 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U A 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U A 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U A 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U A 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U A 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U A 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U A 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U A 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U A 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U A 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U A 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U A 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U A 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
TER
ATOM 1 P G B 17 5.147 -7.996 124.117 1.00 32.10 P
ATOM 2 OP1 G B 17 5.397 -7.087 125.258 1.00 32.02 O
ATOM 3 OP2 G B 17 4.137 -9.071 124.236 1.00 31.85 O
ATOM 4 O5' G B 17 4.761 -7.126 122.830 1.00 32.22 O
ATOM 5 C5' G B 17 5.579 -6.045 122.378 1.00 32.35 C
ATOM 6 C4' G B 17 5.252 -5.654 120.941 1.00 32.50 C
ATOM 7 O4' G B 17 5.964 -6.518 120.017 1.00 32.47 O
ATOM 8 C3' G B 17 3.780 -5.721 120.535 1.00 32.58 C
ATOM 9 O3' G B 17 3.451 -4.600 119.715 1.00 32.57 O
ATOM 10 C2' G B 17 3.693 -7.040 119.762 1.00 32.76 C
ATOM 11 O2' G B 17 2.658 -7.049 118.798 1.00 32.97 O
ATOM 12 C1' G B 17 5.062 -7.088 119.087 1.00 32.74 C
ATOM 13 N9 G B 17 5.580 -8.418 118.756 1.00 32.72 N
ATOM 14 C8 G B 17 5.144 -9.640 119.220 1.00 32.71 C
ATOM 15 N7 G B 17 5.817 -10.652 118.748 1.00 32.51 N
ATOM 16 C5 G B 17 6.767 -10.068 117.921 1.00 32.53 C
ATOM 17 C6 G B 17 7.783 -10.665 117.136 1.00 32.46 C
ATOM 18 O6 G B 17 8.043 -11.869 117.022 1.00 32.78 O
ATOM 19 N1 G B 17 8.539 -9.719 116.438 1.00 32.33 N
ATOM 20 C2 G B 17 8.333 -8.358 116.495 1.00 32.30 C
ATOM 21 N2 G B 17 9.154 -7.595 115.760 1.00 32.19 N
ATOM 22 N3 G B 17 7.383 -7.786 117.228 1.00 32.46 N
ATOM 23 C4 G B 17 6.636 -8.695 117.913 1.00 32.59 C
TER
Atoms:
C4: (8.325,-4.843,125.553)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
OP1: (5.397,-7.087,125.258)
OP2: (4.137,-9.071,124.236)
C3': (3.780,-5.721,120.535)
C1': (5.062,-7.088,119.087)
C5': (5.579,-6.045,122.378)
O6: (8.043,-11.869,117.022)
O4': (5.964,-6.518,120.017)
C8: (5.144,-9.640,119.220)
C2: (8.333,-8.358,116.495)
C6: (7.783,-10.665,117.136)
C5: (6.767,-10.068,117.921)
C4: (6.636,-8.695,117.913)
P: (5.147,-7.996,124.117)
C4': (5.252,-5.654,120.941)
C2': (3.693,-7.040,119.762)
O2': (2.658,-7.049,118.798)
N1: (8.539,-9.719,116.438)
N2: (9.154,-7.595,115.760)
N3: (7.383,-7.786,117.228)
N7: (5.817,-10.652,118.748)
N9: (5.580,-8.418,118.756)
O5': (4.761,-7.126,122.830)
O3': (3.451,-4.600,119.715)
OP2: (4.137,-9.071,124.236)
C3': (3.780,-5.721,120.535)
C1': (5.062,-7.088,119.087)
C5': (5.579,-6.045,122.378)
O6: (8.043,-11.869,117.022)
O4': (5.964,-6.518,120.017)
C8: (5.144,-9.640,119.220)
C2: (8.333,-8.358,116.495)
C6: (7.783,-10.665,117.136)
C5: (6.767,-10.068,117.921)
C4: (6.636,-8.695,117.913)
P: (5.147,-7.996,124.117)
C4': (5.252,-5.654,120.941)
C2': (3.693,-7.040,119.762)
O2': (2.658,-7.049,118.798)
N1: (8.539,-9.719,116.438)
N2: (9.154,-7.595,115.760)
N3: (7.383,-7.786,117.228)
N7: (5.817,-10.652,118.748)
N9: (5.580,-8.418,118.756)
O5': (4.761,-7.126,122.830)
O3': (3.451,-4.600,119.715)
Image (generated by PyMOL):