ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A631:A124

Extra

PDB:
ATOM 1 O3' U A 630 -2.459 54.875 79.038 1.00 51.99 O
ATOM 2 P G A 631 -1.765 56.272 79.427 1.00 38.10 P
ATOM 3 OP1 G A 631 -2.781 57.348 79.187 1.00 38.10 O
ATOM 4 OP2 G A 631 -0.476 56.322 78.687 1.00 38.10 O
ATOM 5 O5' G A 631 -1.492 56.132 81.000 1.00 38.10 O
ATOM 6 C5' G A 631 -2.131 57.002 81.923 1.00 38.10 C
ATOM 7 C4' G A 631 -1.834 56.621 83.350 1.00 38.10 C
ATOM 8 O4' G A 631 -2.233 55.253 83.598 1.00 38.10 O
ATOM 9 C3' G A 631 -0.384 56.630 83.747 1.00 38.10 C
ATOM 10 O3' G A 631 0.114 57.917 83.980 1.00 38.10 O
ATOM 11 C2' G A 631 -0.374 55.746 84.982 1.00 38.10 C
ATOM 12 O2' G A 631 -0.822 56.458 86.119 1.00 38.10 O
ATOM 13 C1' G A 631 -1.426 54.711 84.622 1.00 38.10 C
ATOM 14 N9 G A 631 -0.826 53.446 84.162 1.00 37.80 N
ATOM 15 C8 G A 631 -0.970 52.721 83.006 1.00 37.80 C
ATOM 16 N7 G A 631 -0.269 51.613 83.003 1.00 37.80 N
ATOM 17 C5 G A 631 0.364 51.601 84.231 1.00 37.80 C
ATOM 18 C6 G A 631 1.250 50.674 84.825 1.00 37.80 C
ATOM 19 O6 G A 631 1.697 49.616 84.392 1.00 37.80 O
ATOM 20 N1 G A 631 1.640 51.075 86.081 1.00 37.80 N
ATOM 21 C2 G A 631 1.228 52.227 86.690 1.00 37.80 C
ATOM 22 N2 G A 631 1.718 52.456 87.912 1.00 37.80 N
ATOM 23 N3 G A 631 0.402 53.103 86.164 1.00 37.80 N
ATOM 24 C4 G A 631 0.018 52.719 84.943 1.00 37.80 C
ATOM 25 P C A 632 1.692 58.141 83.970 1.00 33.50 P
ATOM 26 OP1 C A 632 1.942 59.554 84.347 1.00 33.50 O
ATOM 27 OP2 C A 632 2.188 57.647 82.667 1.00 33.50 O
ATOM 28 O5' C A 632 2.185 57.174 85.119 1.00 33.50 O
TER

ATOM 1 O3' U B 123 0.975 51.818 90.768 1.00 16.58 O
ATOM 2 P G B 124 1.958 50.587 91.082 1.00 24.48 P
ATOM 3 OP1 G B 124 1.893 49.664 89.913 1.00 24.48 O
ATOM 4 OP2 G B 124 1.603 50.069 92.425 1.00 24.48 O
ATOM 5 O5' G B 124 3.374 51.300 91.131 1.00 24.48 O
ATOM 6 C5' G B 124 3.695 52.289 90.167 1.00 24.48 C
ATOM 7 C4' G B 124 4.892 53.086 90.570 1.00 24.48 C
ATOM 8 O4' G B 124 4.494 54.203 91.414 1.00 24.48 O
ATOM 9 C3' G B 124 5.911 52.362 91.421 1.00 24.48 C
ATOM 10 O3' G B 124 6.689 51.430 90.706 1.00 24.48 O
ATOM 11 C2' G B 124 6.700 53.526 91.989 1.00 24.48 C
ATOM 12 O2' G B 124 7.533 54.114 90.994 1.00 24.48 O
ATOM 13 C1' G B 124 5.555 54.492 92.318 1.00 24.48 C
ATOM 14 N9 G B 124 5.084 54.300 93.713 1.00 24.99 N
ATOM 15 C8 G B 124 4.001 53.615 94.251 1.00 24.99 C
ATOM 16 N7 G B 124 3.967 53.646 95.567 1.00 24.99 N
ATOM 17 C5 G B 124 5.101 54.380 95.915 1.00 24.99 C
ATOM 18 C6 G B 124 5.623 54.760 97.175 1.00 24.99 C
ATOM 19 O6 G B 124 5.166 54.513 98.294 1.00 24.99 O
ATOM 20 N1 G B 124 6.796 55.499 97.044 1.00 24.99 N
ATOM 21 C2 G B 124 7.400 55.835 95.858 1.00 24.99 C
ATOM 22 N2 G B 124 8.532 56.548 95.901 1.00 24.99 N
ATOM 23 N3 G B 124 6.933 55.488 94.686 1.00 24.99 N
ATOM 24 C4 G B 124 5.795 54.774 94.791 1.00 24.99 C
ATOM 25 P G B 125 7.912 50.708 91.438 1.00 34.56 P
ATOM 26 OP1 G B 125 8.369 49.599 90.567 1.00 34.56 O
ATOM 27 OP2 G B 125 7.467 50.394 92.803 1.00 34.56 O
ATOM 28 O5' G B 125 9.009 51.865 91.483 1.00 34.56 O
TER

Atoms:
OP1: (-2.781,57.348,79.187)
OP2: (-0.476,56.322,78.687)
C3': (-0.384,56.630,83.747)
C1': (-1.426,54.711,84.622)
C5': (-2.131,57.002,81.923)
O6: (1.697,49.616,84.392)
O4': (-2.233,55.253,83.598)
C8: (-0.970,52.721,83.006)
C2: (1.228,52.227,86.690)
C6: (1.250,50.674,84.825)
C5: (0.364,51.601,84.231)
C4: (0.018,52.719,84.943)
P: (-1.765,56.272,79.427)
C4': (-1.834,56.621,83.350)
C2': (-0.374,55.746,84.982)
O2': (-0.822,56.458,86.119)
N1: (1.640,51.075,86.081)
N2: (1.718,52.456,87.912)
N3: (0.402,53.103,86.164)
N7: (-0.269,51.613,83.003)
N9: (-0.826,53.446,84.162)
O5': (-1.492,56.132,81.000)
O3': (0.114,57.917,83.980)
OP1: (1.893,49.664,89.913)
OP2: (1.603,50.069,92.425)
C3': (5.911,52.362,91.421)
C1': (5.555,54.492,92.318)
C5': (3.695,52.289,90.167)
O6: (5.166,54.513,98.294)
O4': (4.494,54.203,91.414)
C8: (4.001,53.615,94.251)
C2: (7.400,55.835,95.858)
C6: (5.623,54.760,97.175)
C5: (5.101,54.380,95.915)
C4: (5.795,54.774,94.791)
P: (1.958,50.587,91.082)
C4': (4.892,53.086,90.570)
C2': (6.700,53.526,91.989)
O2': (7.533,54.114,90.994)
N1: (6.796,55.499,97.044)
N2: (8.532,56.548,95.901)
N3: (6.933,55.488,94.686)
N7: (3.967,53.646,95.567)
N9: (5.084,54.300,93.713)
O5': (3.374,51.300,91.131)
O3': (6.689,51.430,90.706)
Image (generated by PyMOL):
PyMOL image
show in jmol