Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1927:A1956
Extra
PDB:
ATOM 1 O3' C A1926 -33.657 109.244 120.687 1.00 0.01 O
ATOM 2 P G A1927 -34.655 108.007 120.989 1.00 6.93 P
ATOM 3 OP1 G A1927 -34.038 107.220 122.080 1.00 6.93 O
ATOM 4 OP2 G A1927 -34.938 107.324 119.693 1.00 6.93 O
ATOM 5 O5' G A1927 -35.981 108.741 121.515 1.00 6.93 O
ATOM 6 C5' G A1927 -36.099 109.121 122.886 1.00 6.93 C
ATOM 7 C4' G A1927 -37.288 110.017 123.134 1.00 6.93 C
ATOM 8 O4' G A1927 -37.615 110.750 121.931 1.00 6.93 O
ATOM 9 C3' G A1927 -38.585 109.317 123.505 1.00 6.93 C
ATOM 10 O3' G A1927 -38.651 108.984 124.861 1.00 6.93 O
ATOM 11 C2' G A1927 -39.656 110.316 123.092 1.00 6.93 C
ATOM 12 O2' G A1927 -39.869 111.292 124.110 1.00 6.93 O
ATOM 13 C1' G A1927 -39.013 110.977 121.870 1.00 6.93 C
ATOM 14 N9 G A1927 -39.519 110.412 120.607 1.00 6.65 N
ATOM 15 C8 G A1927 -38.744 109.849 119.612 1.00 6.65 C
ATOM 16 N7 G A1927 -39.456 109.459 118.591 1.00 6.65 N
ATOM 17 C5 G A1927 -40.759 109.779 118.960 1.00 6.65 C
ATOM 18 C6 G A1927 -41.962 109.574 118.268 1.00 6.65 C
ATOM 19 O6 G A1927 -42.148 109.072 117.168 1.00 6.65 O
ATOM 20 N1 G A1927 -43.050 110.016 118.965 1.00 6.65 N
ATOM 21 C2 G A1927 -42.997 110.603 120.181 1.00 6.65 C
ATOM 22 N2 G A1927 -44.203 110.963 120.647 1.00 6.65 N
ATOM 23 N3 G A1927 -41.880 110.810 120.862 1.00 6.65 N
ATOM 24 C4 G A1927 -40.816 110.369 120.191 1.00 6.65 C
ATOM 25 P A A1928 -39.007 107.503 125.285 1.00 0.01 P
ATOM 26 OP1 A A1928 -37.874 107.015 126.111 1.00 0.01 O
ATOM 27 OP2 A A1928 -39.341 106.780 124.053 1.00 0.01 O
ATOM 28 O5' A A1928 -40.319 107.692 126.185 1.00 0.01 O
TER
ATOM 1 O3' U B1955 -49.303 111.738 120.279 1.00 28.36 O
ATOM 2 P G B1956 -47.722 111.982 120.314 1.00 0.03 P
ATOM 3 OP1 G B1956 -47.384 112.682 119.066 1.00 0.03 O
ATOM 4 OP2 G B1956 -47.086 110.658 120.591 1.00 0.03 O
ATOM 5 O5' G B1956 -47.501 112.959 121.565 1.00 0.03 O
ATOM 6 C5' G B1956 -47.144 112.441 122.854 1.00 0.03 C
ATOM 7 C4' G B1956 -46.186 113.350 123.600 1.00 0.03 C
ATOM 8 O4' G B1956 -44.880 113.266 122.983 1.00 0.03 O
ATOM 9 C3' G B1956 -46.560 114.828 123.602 1.00 0.03 C
ATOM 10 O3' G B1956 -46.079 115.460 124.792 1.00 0.03 O
ATOM 11 C2' G B1956 -45.795 115.368 122.403 1.00 0.03 C
ATOM 12 O2' G B1956 -45.505 116.743 122.493 1.00 0.03 O
ATOM 13 C1' G B1956 -44.517 114.511 122.416 1.00 0.03 C
ATOM 14 N9 G B1956 -43.969 114.229 121.088 1.00 0.01 N
ATOM 15 C8 G B1956 -44.760 113.886 120.052 1.00 0.01 C
ATOM 16 N7 G B1956 -44.090 113.627 118.974 1.00 0.01 N
ATOM 17 C5 G B1956 -42.764 113.774 119.307 1.00 0.01 C
ATOM 18 C6 G B1956 -41.595 113.591 118.511 1.00 0.01 C
ATOM 19 O6 G B1956 -41.508 113.272 117.323 1.00 0.01 O
ATOM 20 N1 G B1956 -40.427 113.825 119.210 1.00 0.01 N
ATOM 21 C2 G B1956 -40.399 114.193 120.510 1.00 0.01 C
ATOM 22 N2 G B1956 -39.165 114.377 120.969 1.00 0.01 N
ATOM 23 N3 G B1956 -41.483 114.363 121.275 1.00 0.01 N
ATOM 24 C4 G B1956 -42.656 114.141 120.623 1.00 0.01 C
ATOM 25 P C B1957 -46.784 115.184 126.206 1.00 3.87 P
ATOM 26 OP1 C B1957 -46.354 116.246 127.120 1.00 3.87 O
ATOM 27 OP2 C B1957 -46.496 113.805 126.567 1.00 3.87 O
ATOM 28 O5' C B1957 -48.338 115.330 125.878 1.00 3.87 O
TER
ATOM 2 P G A1927 -34.655 108.007 120.989 1.00 6.93 P
ATOM 3 OP1 G A1927 -34.038 107.220 122.080 1.00 6.93 O
ATOM 4 OP2 G A1927 -34.938 107.324 119.693 1.00 6.93 O
ATOM 5 O5' G A1927 -35.981 108.741 121.515 1.00 6.93 O
ATOM 6 C5' G A1927 -36.099 109.121 122.886 1.00 6.93 C
ATOM 7 C4' G A1927 -37.288 110.017 123.134 1.00 6.93 C
ATOM 8 O4' G A1927 -37.615 110.750 121.931 1.00 6.93 O
ATOM 9 C3' G A1927 -38.585 109.317 123.505 1.00 6.93 C
ATOM 10 O3' G A1927 -38.651 108.984 124.861 1.00 6.93 O
ATOM 11 C2' G A1927 -39.656 110.316 123.092 1.00 6.93 C
ATOM 12 O2' G A1927 -39.869 111.292 124.110 1.00 6.93 O
ATOM 13 C1' G A1927 -39.013 110.977 121.870 1.00 6.93 C
ATOM 14 N9 G A1927 -39.519 110.412 120.607 1.00 6.65 N
ATOM 15 C8 G A1927 -38.744 109.849 119.612 1.00 6.65 C
ATOM 16 N7 G A1927 -39.456 109.459 118.591 1.00 6.65 N
ATOM 17 C5 G A1927 -40.759 109.779 118.960 1.00 6.65 C
ATOM 18 C6 G A1927 -41.962 109.574 118.268 1.00 6.65 C
ATOM 19 O6 G A1927 -42.148 109.072 117.168 1.00 6.65 O
ATOM 20 N1 G A1927 -43.050 110.016 118.965 1.00 6.65 N
ATOM 21 C2 G A1927 -42.997 110.603 120.181 1.00 6.65 C
ATOM 22 N2 G A1927 -44.203 110.963 120.647 1.00 6.65 N
ATOM 23 N3 G A1927 -41.880 110.810 120.862 1.00 6.65 N
ATOM 24 C4 G A1927 -40.816 110.369 120.191 1.00 6.65 C
ATOM 25 P A A1928 -39.007 107.503 125.285 1.00 0.01 P
ATOM 26 OP1 A A1928 -37.874 107.015 126.111 1.00 0.01 O
ATOM 27 OP2 A A1928 -39.341 106.780 124.053 1.00 0.01 O
ATOM 28 O5' A A1928 -40.319 107.692 126.185 1.00 0.01 O
TER
ATOM 1 O3' U B1955 -49.303 111.738 120.279 1.00 28.36 O
ATOM 2 P G B1956 -47.722 111.982 120.314 1.00 0.03 P
ATOM 3 OP1 G B1956 -47.384 112.682 119.066 1.00 0.03 O
ATOM 4 OP2 G B1956 -47.086 110.658 120.591 1.00 0.03 O
ATOM 5 O5' G B1956 -47.501 112.959 121.565 1.00 0.03 O
ATOM 6 C5' G B1956 -47.144 112.441 122.854 1.00 0.03 C
ATOM 7 C4' G B1956 -46.186 113.350 123.600 1.00 0.03 C
ATOM 8 O4' G B1956 -44.880 113.266 122.983 1.00 0.03 O
ATOM 9 C3' G B1956 -46.560 114.828 123.602 1.00 0.03 C
ATOM 10 O3' G B1956 -46.079 115.460 124.792 1.00 0.03 O
ATOM 11 C2' G B1956 -45.795 115.368 122.403 1.00 0.03 C
ATOM 12 O2' G B1956 -45.505 116.743 122.493 1.00 0.03 O
ATOM 13 C1' G B1956 -44.517 114.511 122.416 1.00 0.03 C
ATOM 14 N9 G B1956 -43.969 114.229 121.088 1.00 0.01 N
ATOM 15 C8 G B1956 -44.760 113.886 120.052 1.00 0.01 C
ATOM 16 N7 G B1956 -44.090 113.627 118.974 1.00 0.01 N
ATOM 17 C5 G B1956 -42.764 113.774 119.307 1.00 0.01 C
ATOM 18 C6 G B1956 -41.595 113.591 118.511 1.00 0.01 C
ATOM 19 O6 G B1956 -41.508 113.272 117.323 1.00 0.01 O
ATOM 20 N1 G B1956 -40.427 113.825 119.210 1.00 0.01 N
ATOM 21 C2 G B1956 -40.399 114.193 120.510 1.00 0.01 C
ATOM 22 N2 G B1956 -39.165 114.377 120.969 1.00 0.01 N
ATOM 23 N3 G B1956 -41.483 114.363 121.275 1.00 0.01 N
ATOM 24 C4 G B1956 -42.656 114.141 120.623 1.00 0.01 C
ATOM 25 P C B1957 -46.784 115.184 126.206 1.00 3.87 P
ATOM 26 OP1 C B1957 -46.354 116.246 127.120 1.00 3.87 O
ATOM 27 OP2 C B1957 -46.496 113.805 126.567 1.00 3.87 O
ATOM 28 O5' C B1957 -48.338 115.330 125.878 1.00 3.87 O
TER
Atoms:
OP1: (-34.038,107.220,122.080)
OP2: (-34.938,107.324,119.693)
C3': (-38.585,109.317,123.505)
C1': (-39.013,110.977,121.870)
C5': (-36.099,109.121,122.886)
O6: (-42.148,109.072,117.168)
O4': (-37.615,110.750,121.931)
C8: (-38.744,109.849,119.612)
C2: (-42.997,110.603,120.181)
C6: (-41.962,109.574,118.268)
C5: (-40.759,109.779,118.960)
C4: (-40.816,110.369,120.191)
P: (-34.655,108.007,120.989)
C4': (-37.288,110.017,123.134)
C2': (-39.656,110.316,123.092)
O2': (-39.869,111.292,124.110)
N1: (-43.050,110.016,118.965)
N2: (-44.203,110.963,120.647)
N3: (-41.880,110.810,120.862)
N7: (-39.456,109.459,118.591)
N9: (-39.519,110.412,120.607)
O5': (-35.981,108.741,121.515)
O3': (-38.651,108.984,124.861)
OP2: (-34.938,107.324,119.693)
C3': (-38.585,109.317,123.505)
C1': (-39.013,110.977,121.870)
C5': (-36.099,109.121,122.886)
O6: (-42.148,109.072,117.168)
O4': (-37.615,110.750,121.931)
C8: (-38.744,109.849,119.612)
C2: (-42.997,110.603,120.181)
C6: (-41.962,109.574,118.268)
C5: (-40.759,109.779,118.960)
C4: (-40.816,110.369,120.191)
P: (-34.655,108.007,120.989)
C4': (-37.288,110.017,123.134)
C2': (-39.656,110.316,123.092)
O2': (-39.869,111.292,124.110)
N1: (-43.050,110.016,118.965)
N2: (-44.203,110.963,120.647)
N3: (-41.880,110.810,120.862)
N7: (-39.456,109.459,118.591)
N9: (-39.519,110.412,120.607)
O5': (-35.981,108.741,121.515)
O3': (-38.651,108.984,124.861)
OP1: (-47.384,112.682,119.066)
OP2: (-47.086,110.658,120.591)
C3': (-46.560,114.828,123.602)
C1': (-44.517,114.511,122.416)
C5': (-47.144,112.441,122.854)
O6: (-41.508,113.272,117.323)
O4': (-44.880,113.266,122.983)
C8: (-44.760,113.886,120.052)
C2: (-40.399,114.193,120.510)
C6: (-41.595,113.591,118.511)
C5: (-42.764,113.774,119.307)
C4: (-42.656,114.141,120.623)
P: (-47.722,111.982,120.314)
C4': (-46.186,113.350,123.600)
C2': (-45.795,115.368,122.403)
O2': (-45.505,116.743,122.493)
N1: (-40.427,113.825,119.210)
N2: (-39.165,114.377,120.969)
N3: (-41.483,114.363,121.275)
N7: (-44.090,113.627,118.974)
N9: (-43.969,114.229,121.088)
O5': (-47.501,112.959,121.565)
O3': (-46.079,115.460,124.792)
OP2: (-47.086,110.658,120.591)
C3': (-46.560,114.828,123.602)
C1': (-44.517,114.511,122.416)
C5': (-47.144,112.441,122.854)
O6: (-41.508,113.272,117.323)
O4': (-44.880,113.266,122.983)
C8: (-44.760,113.886,120.052)
C2: (-40.399,114.193,120.510)
C6: (-41.595,113.591,118.511)
C5: (-42.764,113.774,119.307)
C4: (-42.656,114.141,120.623)
P: (-47.722,111.982,120.314)
C4': (-46.186,113.350,123.600)
C2': (-45.795,115.368,122.403)
O2': (-45.505,116.743,122.493)
N1: (-40.427,113.825,119.210)
N2: (-39.165,114.377,120.969)
N3: (-41.483,114.363,121.275)
N7: (-44.090,113.627,118.974)
N9: (-43.969,114.229,121.088)
O5': (-47.501,112.959,121.565)
O3': (-46.079,115.460,124.792)
Image (generated by PyMOL):