Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1224:1209
Extra
PDB:
ATOM 1 O3' C A 223 97.970 0.196 115.013 1.00 58.31 O
ATOM 2 P G A 224 98.136 -1.375 115.349 1.00 55.40 P
ATOM 3 OP1 G A 224 98.120 -1.508 116.810 1.00 55.92 O
ATOM 4 OP2 G A 224 99.305 -1.889 114.607 1.00 55.45 O
ATOM 5 O5' G A 224 96.810 -1.996 114.738 1.00 54.78 O
ATOM 6 C5' G A 224 96.750 -3.372 114.399 1.00 54.60 C
ATOM 7 C4' G A 224 96.290 -3.574 112.987 1.00 53.97 C
ATOM 8 O4' G A 224 96.963 -2.657 112.105 1.00 53.89 O
ATOM 9 C3' G A 224 96.570 -4.927 112.396 1.00 53.81 C
ATOM 10 O3' G A 224 95.616 -5.877 112.793 1.00 53.67 O
ATOM 11 C2' G A 224 96.512 -4.636 110.920 1.00 53.31 C
ATOM 12 O2' G A 224 95.153 -4.495 110.502 1.00 52.80 O
ATOM 13 C1' G A 224 97.181 -3.275 110.866 1.00 53.52 C
ATOM 14 N9 G A 224 98.624 -3.389 110.673 1.00 53.86 N
ATOM 15 C8 G A 224 99.557 -2.792 111.500 1.00 54.42 C
ATOM 16 N7 G A 224 100.778 -3.024 111.155 1.00 54.66 N
ATOM 17 C5 G A 224 100.655 -3.814 110.002 1.00 54.22 C
ATOM 18 C6 G A 224 101.663 -4.374 109.155 1.00 54.23 C
ATOM 19 O6 G A 224 102.906 -4.285 109.249 1.00 54.64 O
ATOM 20 N1 G A 224 101.105 -5.098 108.116 1.00 53.72 N
ATOM 21 C2 G A 224 99.757 -5.274 107.906 1.00 53.26 C
ATOM 22 N2 G A 224 99.416 -6.035 106.838 1.00 52.82 N
ATOM 23 N3 G A 224 98.813 -4.756 108.692 1.00 53.24 N
ATOM 24 C4 G A 224 99.324 -4.052 109.707 1.00 53.73 C
ATOM 25 P U A 225 96.071 -7.330 113.256 1.00 51.68 P
ATOM 26 OP1 U A 225 94.851 -8.068 113.653 1.00 51.47 O
ATOM 27 OP2 U A 225 97.170 -7.136 114.266 1.00 52.34 O
ATOM 28 O5' U A 225 96.660 -7.955 111.923 1.00 51.39 O
TER
ATOM 1 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 2 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 3 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 4 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 5 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
ATOM 6 C5' G B 209 102.305 -9.066 102.977 1.00 53.70 C
ATOM 7 C4' G B 209 102.027 -9.228 101.509 1.00 53.22 C
ATOM 8 O4' G B 209 103.014 -8.458 100.749 1.00 53.30 O
ATOM 9 C3' G B 209 102.122 -10.658 100.990 1.00 53.13 C
ATOM 10 O3' G B 209 101.190 -10.857 99.960 1.00 52.59 O
ATOM 11 C2' G B 209 103.489 -10.691 100.362 1.00 53.37 C
ATOM 12 O2' G B 209 103.632 -11.651 99.351 1.00 53.18 O
ATOM 13 C1' G B 209 103.589 -9.300 99.791 1.00 53.23 C
ATOM 14 N9 G B 209 104.949 -8.919 99.552 1.00 53.58 N
ATOM 15 C8 G B 209 105.420 -8.740 98.301 1.00 53.40 C
ATOM 16 N7 G B 209 106.701 -8.518 98.281 1.00 53.79 N
ATOM 17 C5 G B 209 107.125 -8.639 99.616 1.00 54.28 C
ATOM 18 C6 G B 209 108.426 -8.507 100.207 1.00 54.85 C
ATOM 19 O6 G B 209 109.497 -8.260 99.647 1.00 55.05 O
ATOM 20 N1 G B 209 108.393 -8.721 101.581 1.00 55.22 N
ATOM 21 C2 G B 209 107.264 -9.017 102.309 1.00 55.06 C
ATOM 22 N2 G B 209 107.455 -9.161 103.615 1.00 55.50 N
ATOM 23 N3 G B 209 106.039 -9.140 101.803 1.00 54.53 N
ATOM 24 C4 G B 209 106.026 -8.933 100.435 1.00 54.15 C
ATOM 25 P A B 210 99.781 -11.525 100.262 1.00 49.16 P
ATOM 26 OP1 A B 210 99.951 -12.460 101.394 1.00 49.54 O
ATOM 27 OP2 A B 210 99.272 -12.059 98.965 1.00 48.70 O
ATOM 28 O5' A B 210 98.903 -10.260 100.695 1.00 48.99 O
TER
ATOM 2 P G A 224 98.136 -1.375 115.349 1.00 55.40 P
ATOM 3 OP1 G A 224 98.120 -1.508 116.810 1.00 55.92 O
ATOM 4 OP2 G A 224 99.305 -1.889 114.607 1.00 55.45 O
ATOM 5 O5' G A 224 96.810 -1.996 114.738 1.00 54.78 O
ATOM 6 C5' G A 224 96.750 -3.372 114.399 1.00 54.60 C
ATOM 7 C4' G A 224 96.290 -3.574 112.987 1.00 53.97 C
ATOM 8 O4' G A 224 96.963 -2.657 112.105 1.00 53.89 O
ATOM 9 C3' G A 224 96.570 -4.927 112.396 1.00 53.81 C
ATOM 10 O3' G A 224 95.616 -5.877 112.793 1.00 53.67 O
ATOM 11 C2' G A 224 96.512 -4.636 110.920 1.00 53.31 C
ATOM 12 O2' G A 224 95.153 -4.495 110.502 1.00 52.80 O
ATOM 13 C1' G A 224 97.181 -3.275 110.866 1.00 53.52 C
ATOM 14 N9 G A 224 98.624 -3.389 110.673 1.00 53.86 N
ATOM 15 C8 G A 224 99.557 -2.792 111.500 1.00 54.42 C
ATOM 16 N7 G A 224 100.778 -3.024 111.155 1.00 54.66 N
ATOM 17 C5 G A 224 100.655 -3.814 110.002 1.00 54.22 C
ATOM 18 C6 G A 224 101.663 -4.374 109.155 1.00 54.23 C
ATOM 19 O6 G A 224 102.906 -4.285 109.249 1.00 54.64 O
ATOM 20 N1 G A 224 101.105 -5.098 108.116 1.00 53.72 N
ATOM 21 C2 G A 224 99.757 -5.274 107.906 1.00 53.26 C
ATOM 22 N2 G A 224 99.416 -6.035 106.838 1.00 52.82 N
ATOM 23 N3 G A 224 98.813 -4.756 108.692 1.00 53.24 N
ATOM 24 C4 G A 224 99.324 -4.052 109.707 1.00 53.73 C
ATOM 25 P U A 225 96.071 -7.330 113.256 1.00 51.68 P
ATOM 26 OP1 U A 225 94.851 -8.068 113.653 1.00 51.47 O
ATOM 27 OP2 U A 225 97.170 -7.136 114.266 1.00 52.34 O
ATOM 28 O5' U A 225 96.660 -7.955 111.923 1.00 51.39 O
TER
ATOM 1 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 2 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 3 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 4 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 5 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
ATOM 6 C5' G B 209 102.305 -9.066 102.977 1.00 53.70 C
ATOM 7 C4' G B 209 102.027 -9.228 101.509 1.00 53.22 C
ATOM 8 O4' G B 209 103.014 -8.458 100.749 1.00 53.30 O
ATOM 9 C3' G B 209 102.122 -10.658 100.990 1.00 53.13 C
ATOM 10 O3' G B 209 101.190 -10.857 99.960 1.00 52.59 O
ATOM 11 C2' G B 209 103.489 -10.691 100.362 1.00 53.37 C
ATOM 12 O2' G B 209 103.632 -11.651 99.351 1.00 53.18 O
ATOM 13 C1' G B 209 103.589 -9.300 99.791 1.00 53.23 C
ATOM 14 N9 G B 209 104.949 -8.919 99.552 1.00 53.58 N
ATOM 15 C8 G B 209 105.420 -8.740 98.301 1.00 53.40 C
ATOM 16 N7 G B 209 106.701 -8.518 98.281 1.00 53.79 N
ATOM 17 C5 G B 209 107.125 -8.639 99.616 1.00 54.28 C
ATOM 18 C6 G B 209 108.426 -8.507 100.207 1.00 54.85 C
ATOM 19 O6 G B 209 109.497 -8.260 99.647 1.00 55.05 O
ATOM 20 N1 G B 209 108.393 -8.721 101.581 1.00 55.22 N
ATOM 21 C2 G B 209 107.264 -9.017 102.309 1.00 55.06 C
ATOM 22 N2 G B 209 107.455 -9.161 103.615 1.00 55.50 N
ATOM 23 N3 G B 209 106.039 -9.140 101.803 1.00 54.53 N
ATOM 24 C4 G B 209 106.026 -8.933 100.435 1.00 54.15 C
ATOM 25 P A B 210 99.781 -11.525 100.262 1.00 49.16 P
ATOM 26 OP1 A B 210 99.951 -12.460 101.394 1.00 49.54 O
ATOM 27 OP2 A B 210 99.272 -12.059 98.965 1.00 48.70 O
ATOM 28 O5' A B 210 98.903 -10.260 100.695 1.00 48.99 O
TER
Atoms:
OP1: (98.120,-1.508,116.810)
OP2: (99.305,-1.889,114.607)
C3': (96.570,-4.927,112.396)
C1': (97.181,-3.275,110.866)
C5': (96.750,-3.372,114.399)
O6: (102.906,-4.285,109.249)
O4': (96.963,-2.657,112.105)
C8: (99.557,-2.792,111.500)
C2: (99.757,-5.274,107.906)
C6: (101.663,-4.374,109.155)
C5: (100.655,-3.814,110.002)
C4: (99.324,-4.052,109.707)
P: (98.136,-1.375,115.349)
C4': (96.290,-3.574,112.987)
C2': (96.512,-4.636,110.920)
O2': (95.153,-4.495,110.502)
N1: (101.105,-5.098,108.116)
N2: (99.416,-6.035,106.838)
N3: (98.813,-4.756,108.692)
N7: (100.778,-3.024,111.155)
N9: (98.624,-3.389,110.673)
O5': (96.810,-1.996,114.738)
O3': (95.616,-5.877,112.793)
OP2: (99.305,-1.889,114.607)
C3': (96.570,-4.927,112.396)
C1': (97.181,-3.275,110.866)
C5': (96.750,-3.372,114.399)
O6: (102.906,-4.285,109.249)
O4': (96.963,-2.657,112.105)
C8: (99.557,-2.792,111.500)
C2: (99.757,-5.274,107.906)
C6: (101.663,-4.374,109.155)
C5: (100.655,-3.814,110.002)
C4: (99.324,-4.052,109.707)
P: (98.136,-1.375,115.349)
C4': (96.290,-3.574,112.987)
C2': (96.512,-4.636,110.920)
O2': (95.153,-4.495,110.502)
N1: (101.105,-5.098,108.116)
N2: (99.416,-6.035,106.838)
N3: (98.813,-4.756,108.692)
N7: (100.778,-3.024,111.155)
N9: (98.624,-3.389,110.673)
O5': (96.810,-1.996,114.738)
O3': (95.616,-5.877,112.793)
OP1: (100.641,-8.103,105.287)
OP2: (100.230,-10.526,105.838)
C3': (102.122,-10.658,100.990)
C1': (103.589,-9.300,99.791)
C5': (102.305,-9.066,102.977)
O6: (109.497,-8.260,99.647)
O4': (103.014,-8.458,100.749)
C8: (105.420,-8.740,98.301)
C2: (107.264,-9.017,102.309)
C6: (108.426,-8.507,100.207)
C5: (107.125,-8.639,99.616)
C4: (106.026,-8.933,100.435)
P: (101.100,-9.508,105.257)
C4': (102.027,-9.228,101.509)
C2': (103.489,-10.691,100.362)
O2': (103.632,-11.651,99.351)
N1: (108.393,-8.721,101.581)
N2: (107.455,-9.161,103.615)
N3: (106.039,-9.140,101.803)
N7: (106.701,-8.518,98.281)
N9: (104.949,-8.919,99.552)
O5': (101.499,-9.917,103.767)
O3': (101.190,-10.857,99.960)
OP2: (100.230,-10.526,105.838)
C3': (102.122,-10.658,100.990)
C1': (103.589,-9.300,99.791)
C5': (102.305,-9.066,102.977)
O6: (109.497,-8.260,99.647)
O4': (103.014,-8.458,100.749)
C8: (105.420,-8.740,98.301)
C2: (107.264,-9.017,102.309)
C6: (108.426,-8.507,100.207)
C5: (107.125,-8.639,99.616)
C4: (106.026,-8.933,100.435)
P: (101.100,-9.508,105.257)
C4': (102.027,-9.228,101.509)
C2': (103.489,-10.691,100.362)
O2': (103.632,-11.651,99.351)
N1: (108.393,-8.721,101.581)
N2: (107.455,-9.161,103.615)
N3: (106.039,-9.140,101.803)
N7: (106.701,-8.518,98.281)
N9: (104.949,-8.919,99.552)
O5': (101.499,-9.917,103.767)
O3': (101.190,-10.857,99.960)
Image (generated by PyMOL):