ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01087:02016

Extra

PDB:
ATOM 1 O3' C A1086 49.613 100.622 114.879 1.00 43.09 O
ATOM 2 P U A1087 48.400 100.293 115.885 1.00 43.32 P
ATOM 3 OP1 U A1087 48.950 100.216 117.265 1.00 43.66 O
ATOM 4 OP2 U A1087 47.627 99.147 115.334 1.00 39.73 O
ATOM 5 O5' U A1087 47.467 101.576 115.811 1.00 42.90 O
ATOM 6 C5' U A1087 47.930 102.852 116.251 1.00 42.68 C
ATOM 7 C4' U A1087 46.835 103.869 116.076 1.00 45.07 C
ATOM 8 O4' U A1087 46.552 104.008 114.650 1.00 45.82 O
ATOM 9 C3' U A1087 45.500 103.506 116.731 1.00 45.54 C
ATOM 10 O3' U A1087 44.905 104.680 117.259 1.00 47.20 O
ATOM 11 C2' U A1087 44.673 102.991 115.557 1.00 44.58 C
ATOM 12 O2' U A1087 43.287 103.148 115.751 1.00 44.54 O
ATOM 13 C1' U A1087 45.162 103.905 114.442 1.00 43.61 C
ATOM 14 N1 U A1087 44.910 103.448 113.066 1.00 42.70 N
ATOM 15 C2 U A1087 44.274 104.339 112.214 1.00 41.94 C
ATOM 16 O2 U A1087 43.939 105.458 112.553 1.00 43.29 O
ATOM 17 N3 U A1087 44.042 103.872 110.949 1.00 42.14 N
ATOM 18 C4 U A1087 44.367 102.634 110.449 1.00 42.27 C
ATOM 19 O4 U A1087 44.076 102.366 109.277 1.00 43.43 O
ATOM 20 C5 U A1087 45.033 101.765 111.383 1.00 42.30 C
ATOM 21 C6 U A1087 45.276 102.193 112.629 1.00 42.11 C
ATOM 22 P C A1088 44.960 104.940 118.843 1.00 51.51 P
ATOM 23 OP1 C A1088 44.358 106.284 119.134 1.00 49.97 O
ATOM 24 OP2 C A1088 46.362 104.649 119.293 1.00 51.21 O
ATOM 25 O5' C A1088 44.015 103.793 119.428 1.00 49.45 O
TER

ATOM 1 O3' U B2015 42.381 107.765 109.839 1.00 31.36 O
ATOM 2 P G B2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G B2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G B2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G B2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G B2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G B2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G B2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G B2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G B2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G B2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G B2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G B2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G B2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G B2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G B2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G B2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G B2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G B2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G B2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G B2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G B2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G B2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G B2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C B2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C B2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C B2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C B2017 46.364 107.511 102.982 1.00 36.32 O
TER

Atoms:
C4: (44.367,102.634,110.449)
N3: (44.042,103.872,110.949)
OP1: (48.950,100.216,117.265)
OP2: (47.627,99.147,115.334)
C2: (44.274,104.339,112.214)
C1': (45.162,103.905,114.442)
C3': (45.500,103.506,116.731)
O5': (47.467,101.576,115.811)
O4': (46.552,104.008,114.650)
C5': (47.930,102.852,116.251)
P: (48.400,100.293,115.885)
C4': (46.835,103.869,116.076)
C2': (44.673,102.991,115.557)
O2': (43.287,103.148,115.751)
N1: (44.910,103.448,113.066)
O4: (44.076,102.366,109.277)
O2: (43.939,105.458,112.553)
C6: (45.276,102.193,112.629)
C5: (45.033,101.765,111.383)
O3': (44.905,104.680,117.259)
OP1: (43.171,105.644,108.775)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
Image (generated by PyMOL):
PyMOL image
show in jmol