Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:H32:H33
Extra
PDB:
ATOM 1 O3' U A 31 9.297 9.210 109.668 1.00 37.28 O
ATOM 2 P A A 32 10.184 8.143 110.460 1.00 41.41 P
ATOM 3 OP1 A A 32 10.250 8.562 111.867 1.00 39.42 O
ATOM 4 OP2 A A 32 11.449 7.777 109.788 1.00 41.25 O
ATOM 5 O5' A A 32 9.211 6.926 110.399 1.00 36.95 O
ATOM 6 C5' A A 32 9.779 5.782 110.992 1.00 38.02 C
ATOM 7 C4' A A 32 8.773 4.699 111.208 1.00 36.23 C
ATOM 8 O4' A A 32 8.128 4.420 109.948 1.00 35.13 O
ATOM 9 C3' A A 32 9.476 3.422 111.624 1.00 37.66 C
ATOM 10 O3' A A 32 8.595 2.613 112.399 1.00 36.17 O
ATOM 11 C2' A A 32 9.797 2.776 110.284 1.00 38.44 C
ATOM 12 O2' A A 32 9.974 1.374 110.357 1.00 39.52 O
ATOM 13 C1' A A 32 8.576 3.172 109.454 1.00 36.17 C
ATOM 14 N9 A A 32 8.861 3.358 108.029 1.00 36.77 N
ATOM 15 C8 A A 32 9.072 4.559 107.414 1.00 36.88 C
ATOM 16 N7 A A 32 9.281 4.482 106.117 1.00 37.43 N
ATOM 17 C5 A A 32 9.197 3.130 105.861 1.00 37.83 C
ATOM 18 C6 A A 32 9.338 2.420 104.672 1.00 38.73 C
ATOM 19 N6 A A 32 9.592 3.009 103.501 1.00 39.21 N
ATOM 20 N1 A A 32 9.206 1.079 104.738 1.00 39.26 N
ATOM 21 C2 A A 32 8.954 0.507 105.922 1.00 38.76 C
ATOM 22 N3 A A 32 8.803 1.079 107.114 1.00 37.80 N
ATOM 23 C4 A A 32 8.938 2.416 107.021 1.00 37.43 C
ATOM 24 P G A 33 8.687 2.705 113.989 1.00 36.35 P
ATOM 25 OP1 G A 33 10.093 3.120 114.268 1.00 44.35 O
ATOM 26 OP2 G A 33 8.147 1.410 114.449 1.00 35.55 O
ATOM 27 O5' G A 33 7.704 3.892 114.365 1.00 34.63 O
TER
ATOM 1 O3' A B 32 8.595 2.613 112.399 1.00 36.17 O
ATOM 2 P G B 33 8.687 2.705 113.989 1.00 36.35 P
ATOM 3 OP1 G B 33 10.093 3.120 114.268 1.00 44.35 O
ATOM 4 OP2 G B 33 8.147 1.410 114.449 1.00 35.55 O
ATOM 5 O5' G B 33 7.704 3.892 114.365 1.00 34.63 O
ATOM 6 C5' G B 33 6.316 3.639 114.509 1.00 32.42 C
ATOM 7 C4' G B 33 5.615 4.868 115.023 1.00 31.57 C
ATOM 8 O4' G B 33 5.650 5.870 113.982 1.00 31.62 O
ATOM 9 C3' G B 33 4.150 4.650 115.343 1.00 29.63 C
ATOM 10 O3' G B 33 3.728 5.536 116.369 1.00 29.50 O
ATOM 11 C2' G B 33 3.473 5.008 114.035 1.00 28.72 C
ATOM 12 O2' G B 33 2.151 5.454 114.188 1.00 27.42 O
ATOM 13 C1' G B 33 4.351 6.113 113.484 1.00 29.88 C
ATOM 14 N9 G B 33 4.355 6.125 112.009 1.00 29.72 N
ATOM 15 C8 G B 33 4.059 7.229 111.253 1.00 29.46 C
ATOM 16 N7 G B 33 4.102 7.010 109.977 1.00 29.37 N
ATOM 17 C5 G B 33 4.453 5.669 109.854 1.00 29.72 C
ATOM 18 C6 G B 33 4.653 4.848 108.688 1.00 30.07 C
ATOM 19 O6 G B 33 4.572 5.104 107.484 1.00 30.06 O
ATOM 20 N1 G B 33 4.997 3.552 109.000 1.00 30.69 N
ATOM 21 C2 G B 33 5.143 3.073 110.259 1.00 30.83 C
ATOM 22 N2 G B 33 5.475 1.770 110.286 1.00 31.59 N
ATOM 23 N3 G B 33 4.954 3.811 111.352 1.00 30.41 N
ATOM 24 C4 G B 33 4.609 5.100 111.101 1.00 29.92 C
ATOM 25 P A B 34 3.621 5.021 117.881 1.00 29.56 P
ATOM 26 OP1 A B 34 4.855 4.322 118.244 1.00 31.02 O
ATOM 27 OP2 A B 34 3.294 6.230 118.650 1.00 29.86 O
ATOM 28 O5' A B 34 2.417 3.992 117.845 1.00 27.90 O
TER
ATOM 2 P A A 32 10.184 8.143 110.460 1.00 41.41 P
ATOM 3 OP1 A A 32 10.250 8.562 111.867 1.00 39.42 O
ATOM 4 OP2 A A 32 11.449 7.777 109.788 1.00 41.25 O
ATOM 5 O5' A A 32 9.211 6.926 110.399 1.00 36.95 O
ATOM 6 C5' A A 32 9.779 5.782 110.992 1.00 38.02 C
ATOM 7 C4' A A 32 8.773 4.699 111.208 1.00 36.23 C
ATOM 8 O4' A A 32 8.128 4.420 109.948 1.00 35.13 O
ATOM 9 C3' A A 32 9.476 3.422 111.624 1.00 37.66 C
ATOM 10 O3' A A 32 8.595 2.613 112.399 1.00 36.17 O
ATOM 11 C2' A A 32 9.797 2.776 110.284 1.00 38.44 C
ATOM 12 O2' A A 32 9.974 1.374 110.357 1.00 39.52 O
ATOM 13 C1' A A 32 8.576 3.172 109.454 1.00 36.17 C
ATOM 14 N9 A A 32 8.861 3.358 108.029 1.00 36.77 N
ATOM 15 C8 A A 32 9.072 4.559 107.414 1.00 36.88 C
ATOM 16 N7 A A 32 9.281 4.482 106.117 1.00 37.43 N
ATOM 17 C5 A A 32 9.197 3.130 105.861 1.00 37.83 C
ATOM 18 C6 A A 32 9.338 2.420 104.672 1.00 38.73 C
ATOM 19 N6 A A 32 9.592 3.009 103.501 1.00 39.21 N
ATOM 20 N1 A A 32 9.206 1.079 104.738 1.00 39.26 N
ATOM 21 C2 A A 32 8.954 0.507 105.922 1.00 38.76 C
ATOM 22 N3 A A 32 8.803 1.079 107.114 1.00 37.80 N
ATOM 23 C4 A A 32 8.938 2.416 107.021 1.00 37.43 C
ATOM 24 P G A 33 8.687 2.705 113.989 1.00 36.35 P
ATOM 25 OP1 G A 33 10.093 3.120 114.268 1.00 44.35 O
ATOM 26 OP2 G A 33 8.147 1.410 114.449 1.00 35.55 O
ATOM 27 O5' G A 33 7.704 3.892 114.365 1.00 34.63 O
TER
ATOM 1 O3' A B 32 8.595 2.613 112.399 1.00 36.17 O
ATOM 2 P G B 33 8.687 2.705 113.989 1.00 36.35 P
ATOM 3 OP1 G B 33 10.093 3.120 114.268 1.00 44.35 O
ATOM 4 OP2 G B 33 8.147 1.410 114.449 1.00 35.55 O
ATOM 5 O5' G B 33 7.704 3.892 114.365 1.00 34.63 O
ATOM 6 C5' G B 33 6.316 3.639 114.509 1.00 32.42 C
ATOM 7 C4' G B 33 5.615 4.868 115.023 1.00 31.57 C
ATOM 8 O4' G B 33 5.650 5.870 113.982 1.00 31.62 O
ATOM 9 C3' G B 33 4.150 4.650 115.343 1.00 29.63 C
ATOM 10 O3' G B 33 3.728 5.536 116.369 1.00 29.50 O
ATOM 11 C2' G B 33 3.473 5.008 114.035 1.00 28.72 C
ATOM 12 O2' G B 33 2.151 5.454 114.188 1.00 27.42 O
ATOM 13 C1' G B 33 4.351 6.113 113.484 1.00 29.88 C
ATOM 14 N9 G B 33 4.355 6.125 112.009 1.00 29.72 N
ATOM 15 C8 G B 33 4.059 7.229 111.253 1.00 29.46 C
ATOM 16 N7 G B 33 4.102 7.010 109.977 1.00 29.37 N
ATOM 17 C5 G B 33 4.453 5.669 109.854 1.00 29.72 C
ATOM 18 C6 G B 33 4.653 4.848 108.688 1.00 30.07 C
ATOM 19 O6 G B 33 4.572 5.104 107.484 1.00 30.06 O
ATOM 20 N1 G B 33 4.997 3.552 109.000 1.00 30.69 N
ATOM 21 C2 G B 33 5.143 3.073 110.259 1.00 30.83 C
ATOM 22 N2 G B 33 5.475 1.770 110.286 1.00 31.59 N
ATOM 23 N3 G B 33 4.954 3.811 111.352 1.00 30.41 N
ATOM 24 C4 G B 33 4.609 5.100 111.101 1.00 29.92 C
ATOM 25 P A B 34 3.621 5.021 117.881 1.00 29.56 P
ATOM 26 OP1 A B 34 4.855 4.322 118.244 1.00 31.02 O
ATOM 27 OP2 A B 34 3.294 6.230 118.650 1.00 29.86 O
ATOM 28 O5' A B 34 2.417 3.992 117.845 1.00 27.90 O
TER
Atoms:
OP1: (10.250,8.562,111.867)
OP2: (11.449,7.777,109.788)
C3': (9.476,3.422,111.624)
C1': (8.576,3.172,109.454)
C5': (9.779,5.782,110.992)
O4': (8.128,4.420,109.948)
C8: (9.072,4.559,107.414)
O2': (9.974,1.374,110.357)
C6: (9.338,2.420,104.672)
C5: (9.197,3.130,105.861)
C4: (8.938,2.416,107.021)
P: (10.184,8.143,110.460)
C4': (8.773,4.699,111.208)
C2': (9.797,2.776,110.284)
C2: (8.954,0.507,105.922)
N1: (9.206,1.079,104.738)
N3: (8.803,1.079,107.114)
N6: (9.592,3.009,103.501)
N7: (9.281,4.482,106.117)
N9: (8.861,3.358,108.029)
O5': (9.211,6.926,110.399)
O3': (8.595,2.613,112.399)
OP2: (11.449,7.777,109.788)
C3': (9.476,3.422,111.624)
C1': (8.576,3.172,109.454)
C5': (9.779,5.782,110.992)
O4': (8.128,4.420,109.948)
C8: (9.072,4.559,107.414)
O2': (9.974,1.374,110.357)
C6: (9.338,2.420,104.672)
C5: (9.197,3.130,105.861)
C4: (8.938,2.416,107.021)
P: (10.184,8.143,110.460)
C4': (8.773,4.699,111.208)
C2': (9.797,2.776,110.284)
C2: (8.954,0.507,105.922)
N1: (9.206,1.079,104.738)
N3: (8.803,1.079,107.114)
N6: (9.592,3.009,103.501)
N7: (9.281,4.482,106.117)
N9: (8.861,3.358,108.029)
O5': (9.211,6.926,110.399)
O3': (8.595,2.613,112.399)
OP1: (10.093,3.120,114.268)
OP2: (8.147,1.410,114.449)
C3': (4.150,4.650,115.343)
C1': (4.351,6.113,113.484)
C5': (6.316,3.639,114.509)
O6: (4.572,5.104,107.484)
O4': (5.650,5.870,113.982)
C8: (4.059,7.229,111.253)
C2: (5.143,3.073,110.259)
C6: (4.653,4.848,108.688)
C5: (4.453,5.669,109.854)
C4: (4.609,5.100,111.101)
P: (8.687,2.705,113.989)
C4': (5.615,4.868,115.023)
C2': (3.473,5.008,114.035)
O2': (2.151,5.454,114.188)
N1: (4.997,3.552,109.000)
N2: (5.475,1.770,110.286)
N3: (4.954,3.811,111.352)
N7: (4.102,7.010,109.977)
N9: (4.355,6.125,112.009)
O5': (7.704,3.892,114.365)
O3': (3.728,5.536,116.369)
OP2: (8.147,1.410,114.449)
C3': (4.150,4.650,115.343)
C1': (4.351,6.113,113.484)
C5': (6.316,3.639,114.509)
O6: (4.572,5.104,107.484)
O4': (5.650,5.870,113.982)
C8: (4.059,7.229,111.253)
C2: (5.143,3.073,110.259)
C6: (4.653,4.848,108.688)
C5: (4.453,5.669,109.854)
C4: (4.609,5.100,111.101)
P: (8.687,2.705,113.989)
C4': (5.615,4.868,115.023)
C2': (3.473,5.008,114.035)
O2': (2.151,5.454,114.188)
N1: (4.997,3.552,109.000)
N2: (5.475,1.770,110.286)
N3: (4.954,3.811,111.352)
N7: (4.102,7.010,109.977)
N9: (4.355,6.125,112.009)
O5': (7.704,3.892,114.365)
O3': (3.728,5.536,116.369)
Image (generated by PyMOL):